MGE detailed information
MGE type: IScluster/Tn MGE length: 16031 bp
Accession: NZ_CP013007 Location: 9921..25951 Organism: Xanthomonas citri pv. malvacearum strain XcmN1003 Replicon: plasmid pXcmN
Accession: NZ_CP013007 Location: 9921..25951 Organism: Xanthomonas citri pv. malvacearum strain XcmN1003 Replicon: plasmid pXcmN
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| APY30_RS23395 () | 5378..5836 | - | 459 | WP_089504606.1 | hypothetical protein | - |
| APY30_RS23400 () | 6050..6496 | + | 447 | WP_029220486.1 | avidin/streptavidin family protein | - |
| APY30_RS23405 () | 6709..7308 | - | 600 | WP_033836462.1 | hypothetical protein | - |
| APY30_RS23410 () | 7541..8164 | + | 624 | WP_033836461.1 | hypothetical protein | - |
| APY30_RS23415 () | 8161..8655 | - | 495 | WP_033836460.1 | hypothetical protein | - |
| APY30_RS23420 () | 8795..9445 | - | 651 | WP_033836459.1 | recombinase family protein | - |
| APY30_RS23425 () | 9990..10373 | - | 384 | Protein_12 | Tn3 family transposase ISPsy42 | Transposase |
| APY30_RS23435 () | 10564..10824 | + | 261 | WP_005917852.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| APY30_RS23440 () | 10821..11222 | + | 402 | WP_011053002.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| APY30_RS23445 () | 11247..11510 | + | 264 | WP_005917846.1 | hypothetical protein | - |
| APY30_RS23450 () | 11517..12704 | + | 1188 | WP_033836458.1 | zeta toxin family protein | - |
| APY30_RS23455 () | 12984..14210 | + | 1227 | WP_033836457.1 | replication protein | - |
| APY30_RS23470 () | 16148..17425 | - | 1278 | WP_005918469.1 | lytic murein transglycosylase | - |
| APY30_RS23475 () | 17558..19117 | - | 1560 | Protein_20 | Tn3 family transposase TnpA_TnXax1 | Transposase |
| APY30_RS23480 () | 19287..19828 | + | 542 | Protein_21 | IS3 family transposase ISXac2 | Transposase |
| APY30_RS23485 () | 19869..20792 | - | 924 | WP_005934469.1 | Tn3 family transposase TnpR_ISXc4 | Transposase |
| APY30_RS23490 () | 21000..21239 | + | 240 | WP_005934467.1 | ribbon-helix-helix domain-containing protein | - |
| APY30_RS23495 () | 21239..21658 | + | 420 | WP_005934465.1 | putative toxin-antitoxin system toxin component, PIN family | - |
| APY30_RS23500 () | 21663..24638 | + | 2976 | WP_033836402.1 | Tn3 family transposase TnpA_ISXc4 | Transposase |
| APY30_RS23505 () | 24657..25355 | + | 699 | WP_033836401.1 | UPF0149 family protein | - |
| APY30_RS23510 () | 25400..25951 | + | 552 | Protein_27 | IS3 family transposase ISXac2 | Transposase |
| APY30_RS23520 () | 26436..29515 | + | 3080 | Protein_28 | TAL effector repeat-containing protein | - |
| APY30_RS23525 () | 29698..29988 | - | 291 | WP_003490957.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|