MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 152955 bp
Accession: NZ_CP012962 Location: 1..152955 Organism: Cereibacter sphaeroides strain MBTLJ-8 Replicon: plasmid unnamed_1
Accession: NZ_CP012962 Location: 1..152955 Organism: Cereibacter sphaeroides strain MBTLJ-8 Replicon: plasmid unnamed_1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| APX01_RS19430 () | 8..565 | - | 558 | WP_011836221.1 | DUF2726 domain-containing protein | - |
| APX01_RS19435 () | 567..1058 | - | 492 | WP_011836222.1 | hypothetical protein | - |
| APX01_RS19440 () | 1196..2572 | + | 1377 | WP_011339201.1 | ISNCY family transposase ISRel26 | Transposase |
| APX01_RS19445 () | 2703..3530 | - | 828 | WP_017208421.1 | DsbA family protein | - |
| APX01_RS19450 () | 3690..5972 | + | 2283 | WP_061350893.1 | type IV secretion system DNA-binding domain-containing protein | - |
| APX01_RS19455 () | 5972..9303 | + | 3332 | Protein_5 | Multifunctional conjugation protein TraI | Relaxase |
| APX01_RS19460 () | 9300..9932 | + | 633 | WP_011836226.1 | hypothetical protein | - |
| APX01_RS19465 () | 10105..10941 | + | 837 | WP_017140540.1 | hypothetical protein | - |
| APX01_RS23435 () | 10996..11793 | - | 798 | WP_155731657.1 | hypothetical protein | - |
| APX01_RS19470 () | 13096..13821 | + | 726 | WP_011331416.1 | Chromosome partitioning protein ParA | VF |
| APX01_RS22800 () | 13818..14444 | + | 627 | WP_020477363.1 | hypothetical protein | - |
| APX01_RS19475 () | 14508..14759 | - | 252 | WP_017140537.1 | hypothetical protein | - |
| APX01_RS19480 () | 14914..15111 | + | 198 | WP_017140536.1 | hypothetical protein | - |
| APX01_RS19485 () | 15157..15348 | - | 192 | WP_017140535.1 | hypothetical protein | - |
| APX01_RS23445 () | 16405..16563 | + | 159 | WP_023003456.1 | hypothetical protein | - |
| APX01_RS19495 () | 17140..17811 | + | 672 | WP_011331417.1 | SOS response-associated peptidase | - |
| APX01_RS19500 () | 17874..18086 | + | 213 | WP_017140533.1 | type II toxin-antitoxin system VapB family antitoxin | - |
| APX01_RS19505 () | 18086..18499 | + | 414 | WP_011331418.1 | type II toxin-antitoxin system VapC family toxin | - |
| APX01_RS19515 () | 19092..19445 | - | 354 | WP_017140531.1 | hypothetical protein | - |
| APX01_RS19520 () | 19442..20839 | - | 1398 | WP_017140530.1 | DUF4942 domain-containing protein | - |
| APX01_RS19525 () | 20938..21333 | - | 396 | WP_011331421.1 | DUF3768 domain-containing protein | - |
| APX01_RS22810 () | 21834..22316 | + | 483 | WP_160384187.1 | plasmid pRiA4b ORF-3 family protein | - |
| APX01_RS19535 () | 22359..22700 | + | 342 | Protein_22 | IS66 family transposase ISRel24 | Transposase |
| APX01_RS19540 () | 22783..23433 | - | 651 | WP_011331424.1 | LysE family translocator | - |
| APX01_RS19545 () | 23440..24531 | - | 1092 | WP_011331425.1 | DUF2332 domain-containing protein | - |
| APX01_RS23450 () | 24750..24881 | - | 132 | Protein_25 | IS3 family transposase | - |
| APX01_RS23665 () | 24938..25766 | - | 829 | Protein_26 | IS66 family transposase ISApr6 | Transposase |
| APX01_RS19560 () | 25815..26105 | - | 291 | WP_011331427.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| APX01_RS19565 () | 26447..27517 | + | 1071 | WP_011331428.1 | radical SAM protein | - |
| APX01_RS19570 () | 27651..28577 | + | 927 | WP_011331429.1 | methyltransferase domain-containing protein | - |
| APX01_RS19575 () | 28652..29662 | + | 1011 | WP_011331430.1 | isopropylmalate/homocitrate synthase | - |
| APX01_RS19580 () | 29737..30105 | + | 369 | WP_011331431.1 | hypothetical protein | - |
| APX01_RS19585 () | 30098..31420 | + | 1323 | WP_011331432.1 | O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase | - |
| APX01_RS19590 () | 31429..32232 | + | 804 | WP_017140525.1 | hypothetical protein | - |
| APX01_RS19595 () | 32433..34004 | + | 1572 | WP_017140524.1 | asparagine synthase | - |
| APX01_RS22820 () | 34067..34198 | + | 132 | Protein_35 | IS3 family transposase ISRde3 | Transposase |
| APX01_RS19600 () | 34266..35837 | - | 1572 | WP_011331435.1 | IS66 family transposase ISRhsp5 | Transposase |
| APX01_RS19605 () | 35906..36259 | - | 354 | WP_011331436.1 | IS66 family transposase ISRhsp5 | Transposase |
| APX01_RS19610 () | 36256..36555 | - | 300 | WP_017208427.1 | IS66 family transposase ISRhsp5 | Transposase |
| APX01_RS19615 () | 36921..37214 | - | 294 | Protein_39 | IS66 family transposase ISXau4 | Transposase |
| APX01_RS22830 () | 37226..37399 | - | 174 | Protein_40 | transposase | - |
| APX01_RS22835 () | 37485..37694 | + | 210 | Protein_41 | transposase | - |
| APX01_RS19620 () | 38063..38890 | + | 828 | WP_011331438.1 | hypothetical protein | - |
| APX01_RS19625 () | 38933..39310 | - | 378 | WP_011331439.1 | hypothetical protein | - |
| APX01_RS19630 () | 39310..39738 | - | 429 | WP_023003461.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| APX01_RS23670 () | 40693..41103 | + | 411 | WP_017140520.1 | hypothetical protein | - |
| APX01_RS19650 () | 41631..42036 | + | 406 | Protein_46 | transposase | - |
| APX01_RS19655 () | 42156..42338 | + | 183 | WP_017140518.1 | IS66 family transposase IS866 | Transposase |
| APX01_RS22850 () | 42450..44023 | + | 1574 | Protein_48 | IS66 family transposase ISRosp4 | Transposase |
| APX01_RS22855 () | 44543..45754 | - | 1212 | WP_011331443.1 | replication initiation protein RepC | - |
| APX01_RS19675 () | 45937..46923 | - | 987 | WP_011331444.1 | plasmid partitioning protein RepB | - |
| APX01_RS19680 () | 46923..48107 | - | 1185 | WP_011331445.1 | Sporulation initiation inhibitor protein Soj | VF |
| APX01_RS22860 () | 48322..48549 | + | 228 | WP_011331446.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| APX01_RS19690 () | 48539..48934 | + | 396 | WP_011331447.1 | PIN domain-containing protein | Toxin Detail |
| APX01_RS19695 () | 49014..49898 | - | 885 | WP_061350894.1 | Tn3 family transposase TnpR_ISXc4 | Transposase |
| APX01_RS19700 () | 50611..51204 | + | 594 | WP_011331449.1 | biliverdin-producing heme oxygenase | - |
| APX01_RS19705 () | 51272..54067 | + | 2796 | WP_061350895.1 | Phytochrome-like protein cph2 | VF |
| APX01_RS22865 () | 54248..54367 | - | 120 | Protein_57 | IS3 family transposase ISPmar2 | Transposase |
| APX01_RS19710 () | 54529..55083 | + | 555 | WP_011331451.1 | hypothetical protein | - |
| APX01_RS19715 () | 55083..56117 | + | 1035 | WP_061350896.1 | ATP-binding protein | - |
| APX01_RS19720 () | 56114..56578 | + | 465 | WP_011331453.1 | response regulator | - |
| APX01_RS22870 () | 56883..57121 | + | 239 | Protein_61 | transposase | - |
| APX01_RS19725 () | 57588..59078 | + | 1491 | WP_011331455.1 | SulP family inorganic anion transporter | - |
| APX01_RS19730 () | 59090..59938 | + | 849 | WP_017140509.1 | universal stress protein | - |
| APX01_RS19735 () | 59945..60280 | + | 336 | WP_011331456.1 | TraR/DksA C4-type zinc finger protein | - |
| APX01_RS19740 () | 60312..61562 | + | 1251 | WP_011331457.1 | MFS transporter | - |
| APX01_RS19745 () | 61733..62017 | + | 285 | WP_011331458.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| APX01_RS19750 () | 62014..63072 | + | 1059 | WP_011331459.1 | permease | - |
| APX01_RS19755 () | 63085..63315 | + | 231 | WP_011331460.1 | thioredoxin family protein | - |
| APX01_RS19760 () | 63312..63629 | + | 318 | WP_011331461.1 | hypothetical protein | - |
| APX01_RS19765 () | 63847..64308 | + | 462 | WP_080588249.1 | hypothetical protein | - |
| APX01_RS19770 () | 64941..66068 | + | 1128 | WP_061350897.1 | D-inositol 3-phosphate glycosyltransferase | VF |
| APX01_RS23675 () | 66140..66295 | - | 156 | WP_011331463.1 | hypothetical protein | - |
| APX01_RS19775 () | 66533..67702 | - | 1170 | WP_050988691.1 | acyltransferase | - |
| APX01_RS19780 () | 68121..68933 | + | 813 | WP_011331465.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| APX01_RS19785 () | 68933..69940 | + | 1008 | WP_011331466.1 | ArsJ-associated glyceraldehyde-3-phosphate dehydrogenase | - |
| APX01_RS19790 () | 69984..71222 | + | 1239 | WP_011331467.1 | organoarsenical effux MFS transporter ArsJ | - |
| APX01_RS22875 () | 71629..71880 | - | 252 | Protein_77 | IS66 family transposase ISRel24 | Transposase |
| APX01_RS19795 () | 72139..72483 | + | 345 | Protein_78 | IS110 family transposase ISAtu7 | Transposase |
| APX01_RS22880 () | 72485..72928 | - | 444 | Protein_79 | transposase | - |
| APX01_RS22885 () | 72986..73639 | - | 654 | Protein_80 | IS3 family transposase ISPam3 | Transposase |
| APX01_RS19810 () | 73928..75145 | - | 1218 | WP_011331470.1 | transposase | - |
| APX01_RS23680 () | 75311..75838 | - | 528 | WP_160384182.1 | hypothetical protein | - |
| APX01_RS19820 () | 76692..77018 | + | 327 | WP_017140546.1 | hypothetical protein | - |
| APX01_RS19825 () | 77147..77497 | + | 351 | WP_011331471.1 | hypothetical protein | - |
| APX01_RS19830 () | 77564..77854 | + | 291 | WP_011331472.1 | type IV conjugative transfer system protein TraL | - |
| APX01_RS19835 () | 77842..78408 | + | 567 | WP_017140545.1 | type IV conjugative transfer system protein TraE | - |
| APX01_RS19840 () | 78405..79124 | + | 720 | WP_011331474.1 | type-F conjugative transfer system secretin TraK | - |
| APX01_RS19845 () | 79124..80377 | + | 1254 | WP_011331475.1 | TraB/VirB10 family protein | - |
| APX01_RS19850 () | 80374..80802 | + | 429 | WP_011331476.1 | TraV family lipoprotein | - |
| APX01_RS19855 () | 80799..83282 | + | 2484 | WP_061350898.1 | TraC family protein | - |
| APX01_RS19860 () | 83279..83596 | + | 318 | WP_011331478.1 | hypothetical protein | - |
| APX01_RS19865 () | 83574..83933 | + | 360 | WP_011331479.1 | TrbI F-type domain-containing protein | - |
| APX01_RS19870 () | 83930..84460 | + | 531 | WP_011331480.1 | S26 family signal peptidase | - |
| APX01_RS19875 () | 84436..85074 | + | 639 | WP_011331481.1 | hypothetical protein | - |
| APX01_RS19880 () | 85071..86057 | + | 987 | WP_011331482.1 | TraU family protein | - |
| APX01_RS19885 () | 86018..86771 | + | 754 | Protein_96 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| APX01_RS19890 () | 86768..88884 | + | 2117 | Protein_97 | conjugal transfer protein TraN | - |
| APX01_RS19895 () | 89272..90100 | + | 829 | Protein_98 | conjugal transfer protein TraF | - |
| APX01_RS19900 () | 90372..91761 | + | 1390 | Protein_99 | conjugal transfer protein TraH | - |
| APX01_RS19905 () | 91765..95184 | + | 3420 | WP_017208420.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| APX01_RS19910 () | 95614..95892 | - | 279 | WP_017140568.1 | hypothetical protein | - |
| APX01_RS22905 () | 95855..96145 | - | 291 | WP_011836217.1 | BrnT family toxin | - |
| APX01_RS19915 () | 96313..96861 | - | 549 | WP_017140567.1 | IS110 family transposase ISMav6 | Transposase |
| APX01_RS22910 () | 97866..98008 | - | 143 | Protein_104 | IS3 family transposase ISAfe5 | Transposase |
| APX01_RS19925 () | 98188..99390 | - | 1203 | WP_011836218.1 | restriction endonuclease | - |
| APX01_RS22915 () | 99924..100097 | - | 174 | WP_080588245.1 | hypothetical protein | - |
| APX01_RS19930 () | 100094..100432 | - | 339 | WP_017140564.1 | hypothetical protein | - |
| APX01_RS19935 () | 100432..100833 | - | 402 | WP_011836220.1 | hypothetical protein | - |
| APX01_RS19940 () | 100826..101383 | - | 558 | WP_011836221.1 | DUF2726 domain-containing protein | - |
| APX01_RS19945 () | 101385..101876 | - | 492 | WP_011836222.1 | hypothetical protein | - |
| APX01_RS19950 () | 101916..102737 | - | 822 | WP_011836223.1 | DsbA family protein | - |
| APX01_RS19955 () | 102897..105179 | + | 2283 | WP_011836224.1 | type IV secretion system DNA-binding domain-containing protein | - |
| APX01_RS19960 () | 105179..108511 | + | 3333 | WP_160384266.1 | Multifunctional conjugation protein TraI | Relaxase |
| APX01_RS19965 () | 108508..109140 | + | 633 | WP_011836226.1 | hypothetical protein | - |
| APX01_RS19970 () | 109313..110149 | + | 837 | WP_061350899.1 | hypothetical protein | - |
| APX01_RS19975 () | 110619..111467 | + | 849 | WP_017140561.1 | Protein virC1 | VF |
| APX01_RS23685 () | 111719..112024 | + | 306 | WP_017140560.1 | hypothetical protein | - |
| APX01_RS19985 () | 113894..114757 | - | 864 | WP_011836229.1 | DUF945 domain-containing protein | - |
| APX01_RS23480 () | 115826..115984 | + | 159 | WP_017140559.1 | hypothetical protein | - |
| APX01_RS19990 () | 116054..116320 | - | 267 | WP_017208432.1 | hypothetical protein | - |
| APX01_RS19995 () | 116837..117385 | - | 549 | WP_017140556.1 | hypothetical protein | - |
| APX01_RS20000 () | 117726..118943 | - | 1218 | WP_017140555.1 | hypothetical protein | - |
| APX01_RS23690 () | 119395..119715 | + | 321 | WP_017140547.1 | hypothetical protein | - |
| APX01_RS20010 () | 120506..120832 | + | 327 | WP_017140546.1 | hypothetical protein | - |
| APX01_RS20015 () | 120961..121311 | + | 351 | WP_011331471.1 | hypothetical protein | - |
| APX01_RS20020 () | 121378..121668 | + | 291 | WP_011331472.1 | type IV conjugative transfer system protein TraL | - |
| APX01_RS20025 () | 121656..122222 | + | 567 | WP_017140545.1 | type IV conjugative transfer system protein TraE | - |
| APX01_RS20030 () | 122219..122938 | + | 720 | WP_011331474.1 | type-F conjugative transfer system secretin TraK | - |
| APX01_RS20035 () | 122938..124191 | + | 1254 | WP_011331475.1 | TraB/VirB10 family protein | - |
| APX01_RS20040 () | 124188..124616 | + | 429 | WP_011331476.1 | TraV family lipoprotein | - |
| APX01_RS20045 () | 124613..127096 | + | 2484 | WP_061350898.1 | TraC family protein | - |
| APX01_RS20050 () | 127093..127410 | + | 318 | WP_011331478.1 | hypothetical protein | - |
| APX01_RS20055 () | 127388..127747 | + | 360 | WP_011331479.1 | TrbI F-type domain-containing protein | - |
| APX01_RS20060 () | 127744..128274 | + | 531 | WP_011331480.1 | S26 family signal peptidase | - |
| APX01_RS20065 () | 128250..128888 | + | 639 | WP_011331481.1 | hypothetical protein | - |
| APX01_RS20070 () | 128885..129871 | + | 987 | WP_011331482.1 | TraU family protein | - |
| APX01_RS20075 () | 129832..130584 | + | 753 | WP_011331483.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| APX01_RS20080 () | 130581..132689 | + | 2109 | WP_011331484.1 | conjugal transfer protein TraN | - |
| APX01_RS20085 () | 132655..133089 | + | 435 | WP_017140544.1 | conjugal transfer protein TraF | - |
| APX01_RS20090 () | 133082..133915 | + | 834 | WP_011331486.1 | conjugal transfer protein TraF | - |
| APX01_RS20095 () | 133923..134168 | + | 246 | WP_011331487.1 | hypothetical protein | - |
| APX01_RS20100 () | 134188..135576 | + | 1389 | WP_017140543.1 | conjugal transfer protein TraH | - |
| APX01_RS20105 () | 135580..138990 | + | 3411 | WP_011331489.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| APX01_RS23485 () | 138998..139330 | - | 333 | WP_147176093.1 | hypothetical protein | - |
| APX01_RS22930 () | 139831..140253 | + | 423 | WP_160384180.1 | GNAT family N-acetyltransferase | - |
| APX01_RS22935 () | 140316..140786 | + | 471 | WP_023003467.1 | hypothetical protein | - |
| APX01_RS20110 () | 140812..145446 | + | 4635 | WP_011331491.1 | Bifunctional hemolysin/adenylate cyclase | VF |
| APX01_RS20115 () | 145631..145915 | - | 285 | WP_023003468.1 | helix-turn-helix domain-containing protein | - |
| APX01_RS20120 () | 145881..146153 | - | 273 | WP_002724939.1 | BrnT family toxin | - |
| APX01_RS23490 () | 146332..146763 | + | 432 | WP_147176042.1 | hypothetical protein | - |
| APX01_RS20125 () | 147020..147805 | - | 786 | WP_011331492.1 | ImmA/IrrE family metallo-endopeptidase | - |
| APX01_RS20130 () | 147805..148164 | - | 360 | WP_017208431.1 | hypothetical protein | - |
| APX01_RS20135 () | 148230..148820 | - | 591 | WP_017140550.1 | hypothetical protein | - |
| APX01_RS20140 () | 148952..149230 | + | 279 | WP_011331494.1 | hypothetical protein | - |
| APX01_RS20145 () | 149335..150576 | + | 1242 | WP_011331495.1 | nucleotidyltransferase | - |
| APX01_RS20150 () | 150573..151055 | + | 483 | WP_011331496.1 | hypothetical protein | - |
| APX01_RS20155 () | 151036..152226 | + | 1191 | WP_011331497.1 | SAVED domain-containing protein | - |
| APX01_RS22940 () | 152449..152622 | - | 174 | WP_017140549.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|