MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 98999 bp
Accession: NZ_CP012936 Location: 1..98999 Organism: Salmonella enterica subsp. enterica serovar Heidelberg strain N13-01290 Replicon: plasmid pN13-01290_98
Accession: NZ_CP012936 Location: 1..98999 Organism: Salmonella enterica subsp. enterica serovar Heidelberg strain N13-01290 Replicon: plasmid pN13-01290_98
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| APS44_RS24635 () | 455..1486 | + | 1032 | WP_000907873.1 | replication initiation protein | - |
| APS44_RS24640 () | 2395..2664 | + | 270 | WP_000079941.1 | hypothetical protein | Antitoxin Detail |
| APS44_RS24645 () | 2661..2942 | + | 282 | WP_000970007.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| APS44_RS24650 () | 2982..3830 | + | 849 | WP_001057991.1 | 3'-5' exonuclease | - |
| APS44_RS24655 () | 3947..4420 | + | 474 | WP_001334658.1 | hypothetical protein | - |
| APS44_RS27860 () | 4897..5163 | - | 267 | WP_000955263.1 | hypothetical protein | - |
| APS44_RS24665 () | 5163..5657 | - | 495 | WP_001459505.1 | hypothetical protein | - |
| APS44_RS24670 () | 5713..6315 | - | 603 | WP_000517695.1 | hypothetical protein | - |
| APS44_RS24675 () | 6669..7553 | + | 885 | Protein_8 | hypothetical protein | - |
| APS44_RS24680 () | 7736..8998 | + | 1263 | WP_000608644.1 | IS1380-like element ISEc9 family transposase | - |
| APS44_RS24685 () | 9322..10467 | + | 1146 | WP_000976514.1 | class C beta-lactamase CMY-2 | - |
| APS44_RS24690 () | 10561..11094 | + | 534 | WP_001221666.1 | lipocalin family protein | - |
| APS44_RS24695 () | 11091..11408 | - | 318 | WP_000118520.1 | quaternary ammonium compound efflux SMR transporter SugE | - |
| APS44_RS24700 () | 11460..11930 | + | 471 | Protein_13 | hypothetical protein | - |
| APS44_RS24705 () | 12209..14089 | + | 1881 | WP_001283341.1 | colicin 1B | - |
| APS44_RS24710 () | 14107..14454 | - | 348 | WP_000762570.1 | colicin 1B immunity protein | - |
| APS44_RS24715 () | 14573..14920 | + | 348 | WP_000142436.1 | hypothetical protein | - |
| APS44_RS24720 () | 14938..15528 | - | 591 | WP_000194550.1 | hypothetical protein | - |
| APS44_RS24725 () | 15528..15782 | - | 255 | WP_000343103.1 | hypothetical protein | - |
| APS44_RS24730 () | 16134..17135 | + | 1002 | WP_000774875.1 | DUF4238 domain-containing protein | - |
| APS44_RS24735 () | 17311..17655 | - | 345 | WP_000793307.1 | hypothetical protein | - |
| APS44_RS24740 () | 18154..18408 | - | 255 | WP_000678527.1 | hypothetical protein | - |
| APS44_RS24745 () | 18453..19379 | - | 927 | WP_001290416.1 | hypothetical protein | - |
| APS44_RS24750 () | 19937..20155 | + | 219 | WP_000813630.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| APS44_RS24755 () | 20157..20462 | + | 306 | WP_001159871.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| APS44_RS24760 () | 20463..21269 | + | 807 | WP_000016969.1 | site-specific integrase | - |
| APS44_RS24765 () | 21449..22093 | + | 645 | WP_001144036.1 | ParA family protein | - |
| APS44_RS24770 () | 22180..22488 | + | 309 | WP_000030199.1 | hypothetical protein | - |
| APS44_RS24775 () | 22902..23882 | + | 981 | WP_000688514.1 | plasmid segregation protein ParM | - |
| APS44_RS24780 () | 23875..24291 | + | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| APS44_RS24785 () | 24293..25567 | - | 1275 | WP_000457493.1 | Y-family DNA polymerase | - |
| APS44_RS24790 () | 25567..26004 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| APS44_RS24795 () | 26001..26249 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| APS44_RS24800 () | 26667..27569 | + | 903 | WP_000273918.1 | DUF1281 domain-containing protein | - |
| APS44_RS27575 () | 27566..27877 | + | 312 | WP_010891263.1 | hypothetical protein | - |
| APS44_RS24805 () | 27954..28637 | + | 684 | WP_000086178.1 | DNA methylase | - |
| APS44_RS24810 () | 28638..28859 | + | 222 | WP_001104887.1 | hypothetical protein | - |
| APS44_RS24815 () | 28871..29305 | + | 435 | WP_000274403.1 | DUF1380 family protein | - |
| APS44_RS27580 () | 29356..30126 | + | 771 | WP_024133193.1 | hypothetical protein | - |
| APS44_RS24830 () | 30544..30969 | + | 426 | WP_001198928.1 | antirestriction protein | - |
| APS44_RS24835 () | 31016..31438 | + | 423 | WP_000271725.1 | DUF1380 family protein | - |
| APS44_RS24840 () | 31435..31626 | + | 192 | WP_001027500.1 | hypothetical protein | - |
| APS44_RS27865 () | 31959..32027 | - | 69 | Protein_42 | pilus protein | - |
| APS44_RS24850 () | 32396..32923 | + | 528 | WP_001276116.1 | single-stranded DNA-binding protein | - |
| APS44_RS24855 () | 32981..33214 | + | 234 | WP_000006012.1 | DUF905 family protein | - |
| APS44_RS24860 () | 33273..35231 | + | 1959 | WP_001145458.1 | ParB/RepB/Spo0J family partition protein | - |
| APS44_RS24865 () | 35286..35720 | + | 435 | WP_000845897.1 | conjugation system SOS inhibitor PsiB | - |
| APS44_RS24870 () | 35717..36436 | + | 720 | WP_001276260.1 | plasmid SOS inhibition protein A | - |
| APS44_RS24875 () | 36566..37741 | + | 1176 | WP_000942657.1 | transposase | - |
| APS44_RS27615 () | 38188..38688 | + | 501 | WP_000117611.1 | antirestriction protein ArdA | - |
| APS44_RS24885 () | 39417..39851 | + | 435 | WP_000218863.1 | hypothetical protein | - |
| APS44_RS24890 () | 39945..40211 | + | 267 | WP_001247862.1 | hypothetical protein | - |
| APS44_RS24895 () | 40276..41178 | + | 903 | WP_000038404.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| APS44_RS24900 () | 41178..41459 | + | 282 | WP_001334682.1 | hypothetical protein | - |
| APS44_RS24905 () | 41490..41741 | - | 252 | WP_000148286.1 | helix-turn-helix domain-containing protein | - |
| APS44_RS24910 () | 42322..43170 | + | 849 | WP_060556271.1 | DUF4942 domain-containing protein | - |
| APS44_RS24915 () | 43256..43591 | - | 336 | WP_000157086.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| APS44_RS24920 () | 43825..44157 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| APS44_RS24925 () | 44168..46867 | + | 2700 | WP_001474686.1 | IncI1-type relaxase NikB | - |
| APS44_RS24930 () | 46904..49195 | - | 2292 | WP_001289271.1 | hypothetical protein | - |
| APS44_RS24935 () | 49188..50258 | - | 1071 | WP_000151575.1 | IncI1-type conjugal transfer protein TrbB | - |
| APS44_RS24940 () | 50277..51485 | - | 1209 | WP_000121273.1 | IncI1-type conjugal transfer protein TrbA | - |
| APS44_RS24945 () | 51777..51929 | + | 153 | WP_001303307.1 | Hok/Gef family protein | - |
| APS44_RS24950 () | 52001..52252 | - | 252 | WP_001291965.1 | hypothetical protein | - |
| APS44_RS24955 () | 52613..53392 | - | 780 | WP_001323403.1 | IS21-like element IS100kyp family helper ATPase IstB | - |
| APS44_RS24960 () | 53392..54414 | - | 1023 | WP_001572805.1 | IS21-like element IS100 family transposase | - |
| APS44_RS27870 () | 55135..55311 | - | 177 | WP_001054900.1 | hypothetical protein | - |
| APS44_RS24965 () | 55703..55912 | + | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| APS44_RS24970 () | 55984..56646 | - | 663 | WP_000644794.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| APS44_RS24975 () | 56717..58885 | - | 2169 | WP_000698368.1 | DotA/TraY family protein | - |
| APS44_RS24980 () | 58982..59566 | - | 585 | WP_001037998.1 | conjugal transfer protein TraX | - |
| APS44_RS24985 () | 59595..60797 | - | 1203 | WP_001189158.1 | IncI1-type conjugal transfer protein TraW | - |
| APS44_RS24990 () | 60764..61378 | - | 615 | WP_000337394.1 | IncI1-type conjugal transfer protein TraV | - |
| APS44_RS24995 () | 61378..64422 | - | 3045 | WP_001024751.1 | IncI1-type conjugal transfer protein TraU | - |
| APS44_RS25000 () | 64512..65312 | - | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| APS44_RS25005 () | 65296..65484 | - | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| APS44_RS25010 () | 65548..65952 | - | 405 | WP_000086960.1 | IncI1-type conjugal transfer protein TraR | - |
| APS44_RS25015 () | 66003..66530 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| APS44_RS25020 () | 66530..67234 | - | 705 | WP_000801920.1 | IncI1-type conjugal transfer protein TraP | - |
| APS44_RS25025 () | 67234..68523 | - | 1290 | WP_001271997.1 | conjugal transfer protein TraO | - |
| APS44_RS25030 () | 68526..69509 | - | 984 | WP_001191878.1 | IncI1-type conjugal transfer protein TraN | - |
| APS44_RS25035 () | 69520..70212 | - | 693 | WP_000138552.1 | DotI/IcmL family type IV secretion protein | - |
| APS44_RS25040 () | 70209..70556 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| APS44_RS25045 () | 70574..74341 | - | 3768 | WP_001141535.1 | hypothetical protein | - |
| APS44_RS25050 () | 74431..74982 | - | 552 | WP_000014584.1 | phospholipase D family protein | - |
| APS44_RS26805 () | 74997..75287 | - | 291 | WP_001299214.1 | hypothetical protein | - |
| APS44_RS25055 () | 75284..76432 | - | 1149 | WP_001024972.1 | plasmid transfer ATPase TraJ | - |
| APS44_RS25060 () | 76429..77247 | - | 819 | WP_000646097.1 | IncI1-type conjugal transfer lipoprotein TraI | - |
| APS44_RS25065 () | 77244..77702 | - | 459 | WP_001079808.1 | IncI1-type conjugal transfer lipoprotein TraH | - |
| APS44_RS25070 () | 78097..78681 | - | 585 | WP_000977517.1 | histidine phosphatase family protein | - |
| APS44_RS25075 () | 78741..79943 | - | 1203 | WP_000976353.1 | conjugal transfer protein TraF | - |
| APS44_RS25080 () | 80029..80853 | - | 825 | WP_001238927.1 | hypothetical protein | - |
| APS44_RS25085 () | 81004..82158 | - | 1155 | WP_001139958.1 | integrase | - |
| APS44_RS26810 () | 82849..83097 | + | 249 | WP_001349157.1 | hypothetical protein | - |
| APS44_RS25100 () | 83094..84386 | - | 1293 | WP_032274560.1 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| APS44_RS26815 () | 84386..85042 | - | 657 | WP_001193553.1 | prepilin peptidase | - |
| APS44_RS25105 () | 85027..85587 | - | 561 | WP_000014116.1 | lytic transglycosylase domain-containing protein | - |
| APS44_RS25110 () | 85597..86211 | - | 615 | WP_000959785.1 | pilus assembly protein PilX | - |
| APS44_RS25115 () | 86229..87326 | - | 1098 | WP_001208805.1 | type II secretion system F family protein | - |
| APS44_RS25120 () | 87339..88892 | - | 1554 | WP_000362202.1 | Flp pilus assembly complex ATPase component TadA | - |
| APS44_RS25125 () | 88903..89355 | - | 453 | WP_001247336.1 | type IV pilus biogenesis protein PilP | - |
| APS44_RS25130 () | 89342..90637 | - | 1296 | WP_000752774.1 | type 4b pilus protein PilO2 | - |
| APS44_RS25135 () | 90630..92312 | - | 1683 | WP_000748143.1 | PilN family type IVB pilus formation outer membrane protein | - |
| APS44_RS25140 () | 92326..92763 | - | 438 | WP_000539807.1 | type IV pilus biogenesis protein PilM | - |
| APS44_RS25145 () | 92763..93830 | - | 1068 | WP_000742600.1 | type IV pilus biogenesis lipoprotein PilL | - |
| APS44_RS25150 () | 94504..94956 | - | 453 | WP_000008892.1 | hypothetical protein | - |
| APS44_RS25155 () | 94999..95253 | - | 255 | WP_001136192.1 | PilI type IV pilus biogenesis protein | - |
| APS44_RS25160 () | 95521..96087 | - | 567 | WP_000776428.1 | hypothetical protein | - |
| APS44_RS25165 () | 96101..96784 | - | 684 | WP_000213857.1 | conjugal transfer protein TraC | - |
| APS44_RS25170 () | 97038..97571 | - | 534 | WP_001303319.1 | transcription termination factor NusG | - |
| APS44_RS25175 () | 98013..98300 | - | 288 | WP_000074849.1 | conjugal transfer protein TraA | - |
| APS44_RS26835 () | 98218..98481 | - | 264 | WP_001324596.1 | ash family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|