MGE detailed information
MGE type: Genomic_island MGE length: 19253 bp
Accession: NZ_CP012868 Location: 97386..116638 Organism: Escherichia coli str. K-12 substr. MG1655 strain K-12 Replicon: chromosome
Accession: NZ_CP012868 Location: 97386..116638 Organism: Escherichia coli str. K-12 substr. MG1655 strain K-12 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QQ24_RS00465 () | 92865..93368 | - | 504 | WP_000870592.1 | type 1 fimbria minor subunit FimG | - |
| QQ24_RS00470 () | 93381..93911 | - | 531 | WP_001244827.1 | type 1 fimbria minor subunit FimF | - |
| QQ24_RS00475 () | 93921..96557 | - | 2637 | WP_000121005.1 | fimbrial usher FimD | - |
| QQ24_RS00480 () | 96624..97349 | - | 726 | WP_000066547.1 | type 1 fimbria chaperone FimC | - |
| QQ24_RS00485 () | 97386..97925 | - | 540 | WP_000824114.1 | putative major fimbrial subunit LpfA | VF |
| QQ24_RS00490 () | 97990..98538 | - | 549 | WP_000695564.1 | Type-1 fimbrial protein, A chain | VF |
| QQ24_RS00500 () | 99020..99616 | - | 597 | WP_000044711.1 | Tyrosine recombinase XerD | VF |
| QQ24_RS00505 () | 100094..100696 | - | 603 | WP_000790583.1 | Tyrosine recombinase XerC | VF |
| QQ24_RS00520 () | 102152..102868 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| QQ24_RS00525 () | 102888..103994 | + | 1107 | WP_001309184.1 | N-acetylneuraminate epimerase | - |
| QQ24_RS00530 () | 104059..105039 | + | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| QQ24_RS00535 () | 105622..106862 | - | 1241 | Protein_95 | helicase YjhR | - |
| QQ24_RS25425 () | 106978..107223 | + | 246 | Protein_96 | GNAT family N-acetyltransferase | - |
| QQ24_RS00550 () | 107600..107857 | + | 258 | WP_001054376.1 | hypothetical protein | Toxin Detail |
| QQ24_RS00555 () | 107869..108414 | + | 546 | WP_001309181.1 | N-acetyltransferase | Antitoxin Detail |
| QQ24_RS00560 () | 108470..109216 | + | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| QQ24_RS24870 () | 109385..109603 | + | 219 | Protein_100 | hypothetical protein | - |
| QQ24_RS26005 () | 109641..109757 | + | 117 | Protein_101 | VOC family protein | - |
| QQ24_RS00565 () | 110002..111123 | + | 1122 | WP_000010829.1 | M42 family metallopeptidase | - |
| QQ24_RS00570 () | 111120..111398 | + | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB | - |
| QQ24_RS00575 () | 111410..112723 | + | 1314 | WP_000460843.1 | galactitol-specific PTS transporter subunit IIC | - |
| QQ24_RS00580 () | 112736..113542 | + | 807 | WP_000118626.1 | BtpA family protein SgcQ | - |
| QQ24_RS00585 () | 113673..114104 | + | 432 | WP_000606406.1 | PTS sugar transporter subunit IIA | - |
| QQ24_RS00590 () | 114116..114748 | + | 633 | WP_000600622.1 | ribulose-phosphate 3 epimerase family protein | - |
| QQ24_RS00595 () | 114765..115547 | + | 783 | WP_000082780.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| QQ24_RS00600 () | 115850..116638 | + | 789 | WP_000251798.1 | IclR family transcriptional regulator | - |
| QQ24_RS00605 () | 116643..117548 | + | 906 | WP_000714563.1 | dihydrodipicolinate synthase family protein | - |
| QQ24_RS00610 () | 117559..119526 | + | 1968 | WP_000116326.1 | xylonate dehydratase YjhG | - |
| QQ24_RS00615 () | 119633..120982 | + | 1350 | WP_001128363.1 | GntP family permease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|