MGE detailed information
MGE type: Prophage MGE length: 50188 bp
Accession: NZ_CP012868 Location: 4344644..4394831 Organism: Escherichia coli str. K-12 substr. MG1655 strain K-12 Replicon: chromosome
Accession: NZ_CP012868 Location: 4344644..4394831 Organism: Escherichia coli str. K-12 substr. MG1655 strain K-12 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QQ24_RS21435 () | 4339778..4340734 | + | 957 | WP_000643333.1 | aldehyde oxidoreductase FAD-binding subunit PaoB | - |
| QQ24_RS21440 () | 4340731..4342929 | + | 2199 | WP_000667026.1 | aldehyde oxidoreductase molybdenum-binding subunit PaoC | - |
| QQ24_RS21445 () | 4342939..4343895 | + | 957 | WP_000121359.1 | molybdenum cofactor insertion chaperone PaoD | - |
| QQ24_RS21450 () | 4343946..4344284 | + | 339 | Protein_4083 | LysR family transcriptional regulator | - |
| QQ24_RS21460 () | 4344569..4345969 | + | 1401 | WP_001407714.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| QQ24_RS21465 () | 4346086..4346526 | + | 441 | WP_000224818.1 | hypothetical protein | - |
| QQ24_RS21470 () | 4346523..4346747 | + | 225 | WP_001272156.1 | helix-turn-helix domain-containing protein | - |
| QQ24_RS21475 () | 4346866..4347720 | + | 855 | WP_000072039.1 | hypothetical protein | - |
| QQ24_RS21480 () | 4347747..4348445 | + | 699 | WP_001214248.1 | recombinase family protein | - |
| QQ24_RS21485 () | 4348717..4349343 | + | 627 | WP_000860996.1 | inovirus Gp2 family protein | - |
| QQ24_RS21490 () | 4349434..4350264 | - | 831 | Protein_4090 | type III restriction endonuclease subunit R | - |
| QQ24_RS21495 () | 4350319..4351016 | + | 698 | Protein_4091 | IS1 family transposase IS1R | Transposase |
| QQ24_RS24730 () | 4351033..4351236 | - | 204 | Protein_4092 | DUF3987 domain-containing protein | - |
| QQ24_RS26220 () | 4351295..4351390 | + | 96 | WP_211180486.1 | putative translational regulatory protein ArgL | - |
| QQ24_RS21500 () | 4351360..4352364 | + | 1005 | WP_001281825.1 | Ornithine carbamoyltransferase subunit F | VF |
| QQ24_RS21505 () | 4352503..4353261 | + | 759 | WP_001121657.1 | DNA-binding transcriptional repressor XynR | - |
| QQ24_RS21510 () | 4353266..4354876 | - | 1611 | WP_000406871.1 | glycoside hydrolase family 43 protein | - |
| QQ24_RS21515 () | 4354888..4356270 | - | 1383 | WP_000192863.1 | MFS transporter | - |
| QQ24_RS21520 () | 4356497..4358464 | - | 1968 | WP_000151261.1 | xylonate dehydratase YagF | - |
| QQ24_RS21525 () | 4358479..4359387 | - | 909 | WP_001136613.1 | 2-keto-3-deoxygluconate aldolase | - |
| QQ24_RS21530 () | 4359682..4360836 | + | 1155 | WP_010723086.1 | IS481 family transposase ISEc19 | Transposase |
| QQ24_RS21535 () | 4360930..4361280 | + | 351 | WP_001030800.1 | type IV toxin-antitoxin system antitoxin YagB | - |
| QQ24_RS21540 () | 4361303..4361551 | + | 249 | Protein_4102 | IS3 family transposase ISEhe3 | Transposase |
| QQ24_RS24735 () | 4361561..4361734 | - | 174 | Protein_4103 | IS30 family transposase | - |
| QQ24_RS21545 () | 4361790..4362487 | + | 698 | Protein_4104 | IS1 family transposase IS1R | Transposase |
| QQ24_RS21550 () | 4362504..4362851 | + | 348 | Protein_4105 | ABC transporter permease subunit | - |
| QQ24_RS21555 () | 4362863..4363909 | + | 1047 | WP_000192349.1 | sn-glycerol-3-phosphate import ATP-binding protein UgpC | VF |
| QQ24_RS21560 () | 4364018..4364950 | - | 933 | WP_000081352.1 | homocysteine S-methyltransferase | - |
| QQ24_RS21565 () | 4364937..4366340 | - | 1404 | WP_001393629.1 | S-methylmethionine permease | - |
| QQ24_RS21570 () | 4366584..4367564 | + | 981 | WP_000019403.1 | IS5 family transposase IS5D | Transposase |
| QQ24_RS21575 () | 4367712..4368803 | - | 1092 | Protein_4110 | group II intron reverse transcriptase/maturase | - |
| QQ24_RS21590 () | 4369476..4369901 | - | 426 | Protein_4111 | IS3 family transposase | - |
| QQ24_RS21595 () | 4369911..4371062 | - | 1152 | WP_001254938.1 | IS30 family transposase IS30D | Transposase |
| QQ24_RS21600 () | 4371130..4371387 | - | 258 | Protein_4113 | IS3 family transposase ISEc52 | Transposase |
| QQ24_RS21605 () | 4371483..4372376 | + | 894 | WP_000770246.1 | LysR family transcriptional regulator | - |
| QQ24_RS21610 () | 4372705..4373568 | + | 864 | WP_001065553.1 | GTPase family protein | - |
| QQ24_RS21615 () | 4373660..4374481 | + | 822 | WP_000197389.1 | DUF945 domain-containing protein | - |
| QQ24_RS25840 () | 4374698..4374889 | + | 192 | Protein_4117 | DeoR family transcriptional regulator | - |
| QQ24_RS25845 () | 4374885..4375112 | + | 228 | WP_001548158.1 | hypothetical protein | - |
| QQ24_RS25850 () | 4375112..4375555 | + | 444 | WP_000824223.1 | hypothetical protein | - |
| QQ24_RS21630 () | 4375578..4376045 | + | 468 | WP_001547765.1 | hypothetical protein | - |
| QQ24_RS21635 () | 4376122..4376361 | + | 240 | WP_000194654.1 | DUF905 domain-containing protein | - |
| QQ24_RS21640 () | 4376459..4376917 | + | 459 | WP_000211838.1 | antirestriction protein | - |
| QQ24_RS21645 () | 4376933..4377409 | + | 477 | WP_000811693.1 | RadC family protein | - |
| QQ24_RS24765 () | 4377418..4377639 | + | 222 | WP_000691994.1 | DUF987 domain-containing protein | - |
| QQ24_RS21650 () | 4377658..4377975 | + | 318 | WP_000070395.1 | type IV toxin-antitoxin system antitoxin YafW | Antitoxin Detail |
| QQ24_RS21655 () | 4377996..4378337 | + | 342 | WP_000854672.1 | type IV toxin-antitoxin system toxin YkfI | Toxin Detail |
| QQ24_RS21665 () | 4378909..4380162 | - | 1254 | WP_000893278.1 | glutamate-5-semialdehyde dehydrogenase | - |
| QQ24_RS21670 () | 4380174..4381277 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| QQ24_RS21675 () | 4381565..4382620 | + | 1056 | WP_000749863.1 | phosphoporin PhoE | - |
| QQ24_RS21680 () | 4382659..4383046 | - | 388 | Protein_4130 | sigma factor-binding protein Crl | - |
| QQ24_RS21685 () | 4383046..4383743 | + | 698 | Protein_4131 | IS1 family transposase IS1A | Transposase |
| QQ24_RS25855 () | 4383757..4383837 | - | 81 | Protein_4132 | sigma factor-binding protein Crl | - |
| QQ24_RS21690 () | 4383895..4385139 | - | 1245 | WP_000189532.1 | esterase FrsA | - |
| - () | 4384555..4384635 | - | 81 | NuclAT_12 | - | - |
| - () | 4384555..4384635 | - | 81 | NuclAT_12 | - | - |
| - () | 4384555..4384635 | - | 81 | NuclAT_12 | - | - |
| - () | 4384555..4384635 | - | 81 | NuclAT_12 | - | - |
| QQ24_RS21695 () | 4385231..4385689 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| QQ24_RS21700 () | 4385950..4387407 | + | 1458 | WP_001292994.1 | cytosol nonspecific dipeptidase | - |
| QQ24_RS21705 () | 4387464..4387985 | - | 522 | Protein_4136 | peptide chain release factor H | - |
| QQ24_RS21710 () | 4387981..4388187 | - | 207 | Protein_4137 | RtcB family protein | - |
| QQ24_RS21715 () | 4388505..4388957 | - | 453 | WP_001059892.1 | GNAT family N-acetyltransferase | - |
| QQ24_RS21720 () | 4388967..4389365 | - | 399 | WP_001263489.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| QQ24_RS21725 () | 4389368..4389661 | - | 294 | WP_000554758.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| QQ24_RS21730 () | 4389713..4390768 | - | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| QQ24_RS21735 () | 4390839..4391624 | - | 786 | WP_000207552.1 | Chemotaxis protein LafU | VF |
| QQ24_RS21740 () | 4391596..4393308 | + | 1713 | Protein_4143 | Flagellar biosynthesis protein FlhA | VF |
| QQ24_RS21745 () | 4393532..4394029 | - | 498 | WP_000006255.1 | REP-associated tyrosine transposase RayT | - |
| QQ24_RS21750 () | 4394205..4394954 | - | 750 | WP_000056849.1 | Murein DD-endopeptidase MepH | VF |
| QQ24_RS21755 () | 4395164..4395424 | + | 261 | WP_000729703.1 | type II toxin-antitoxin system antitoxin DinJ | - |
| QQ24_RS21760 () | 4395427..4395705 | + | 279 | WP_000615983.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | - |
| QQ24_RS21765 () | 4395861..4396601 | + | 741 | WP_001225679.1 | murein L,D-transpeptidase | - |
| QQ24_RS21770 () | 4396572..4397339 | - | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| QQ24_RS21775 () | 4397545..4398123 | - | 579 | WP_000284050.1 | D-sedoheptulose 7-phosphate isomerase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|