MGE detailed information
MGE type: Conjugative plasmid MGE length: 114221 bp
Accession: NZ_CP012634 Location: 1..114221 Organism: Escherichia coli strain SF-166 Replicon: plasmid pSF-166-1
Accession: NZ_CP012634 Location: 1..114221 Organism: Escherichia coli strain SF-166 Replicon: plasmid pSF-166-1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AN204_RS27985 () | 1599..2338 | - | 740 | Protein_1 | IS3 family transposase IS629 | Transposase |
| AN204_RS24220 () | 2440..2700 | + | 261 | WP_000371882.1 | hypothetical protein | - |
| AN204_RS24225 () | 2697..3206 | + | 510 | WP_000194542.1 | hypothetical protein | - |
| AN204_RS24230 () | 3226..3573 | - | 348 | WP_000142452.1 | hypothetical protein | - |
| AN204_RS24235 () | 3702..4037 | + | 336 | WP_001080732.1 | colicin transporter | - |
| AN204_RS24245 () | 5489..6175 | + | 687 | Protein_6 | replication initiation protein | - |
| AN204_RS24250 () | 6507..7382 | + | 876 | WP_001224623.1 | ChaN family lipoprotein | - |
| AN204_RS24255 () | 7390..8166 | + | 777 | WP_000981091.1 | energy transducer TonB | - |
| AN204_RS24260 () | 8335..10596 | + | 2262 | WP_001100763.1 | TonB-dependent receptor | - |
| AN204_RS24265 () | 10665..11840 | + | 1176 | WP_042010676.1 | putative protein YncE | VF |
| AN204_RS27995 () | 12363..12668 | - | 306 | Protein_11 | IS91 family transposase ISSbo1 | Transposase |
| AN204_RS27440 () | 12694..13271 | + | 578 | Protein_12 | IS3 family transposase IS629 | Transposase |
| AN204_RS24280 () | 13162..13917 | - | 756 | WP_000065240.1 | IS21 family transposase ISEc10 | Transposase |
| AN204_RS24285 () | 13914..15413 | - | 1500 | WP_000143800.1 | IS21 family transposase ISEc10 | Transposase |
| AN204_RS26705 () | 15499..15849 | + | 351 | Protein_15 | IS3 family transposase IS629 | Transposase |
| AN204_RS28260 () | 16522..16836 | + | 315 | Protein_16 | IS5 family transposase ISKpn26 | Transposase |
| AN204_RS28265 () | 16837..17010 | + | 174 | Protein_17 | IS5 family transposase ISKpn26 | Transposase |
| AN204_RS27450 () | 17160..17793 | - | 634 | Protein_18 | histidine-type phosphatase | - |
| AN204_RS24315 () | 17915..18400 | - | 486 | WP_000874189.1 | hypothetical protein | - |
| AN204_RS24320 () | 18425..18910 | - | 486 | WP_001267176.1 | TlpA family protein disulfide reductase | - |
| AN204_RS24325 () | 18897..19592 | - | 696 | WP_000117262.1 | Lipoprotein-releasing system ATP-binding protein LolD | VF |
| AN204_RS24330 () | 19597..20727 | - | 1131 | WP_000729218.1 | ABC transporter permease | - |
| AN204_RS24335 () | 20717..22000 | - | 1284 | WP_000964653.1 | ABC transporter permease | - |
| AN204_RS24340 () | 22003..23382 | - | 1380 | WP_000119836.1 | DUF2318 domain-containing protein | - |
| AN204_RS24345 () | 23486..24013 | - | 528 | WP_000178050.1 | iron transporter | - |
| AN204_RS24350 () | 24054..25940 | - | 1887 | WP_001332815.1 | FTR1 family iron permease | - |
| AN204_RS24355 () | 26287..27102 | - | 816 | WP_012372823.1 | Na(+)-translocating NADH-quinone reductase subunit C | - |
| AN204_RS24360 () | 27285..27791 | - | 507 | WP_000949451.1 | protein disulfide oxidoreductase | - |
| AN204_RS24365 () | 27781..28008 | - | 228 | WP_077459403.1 | DsbA family protein | - |
| AN204_RS24370 () | 28038..28742 | - | 705 | WP_001067837.1 | IS6 family transposase IS26 | Transposase |
| AN204_RS24380 () | 29798..30655 | - | 858 | WP_000131004.1 | incFII family plasmid replication initiator RepA | - |
| AN204_RS24385 () | 30648..30722 | - | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| AN204_RS24390 () | 30955..31215 | - | 261 | WP_000078109.1 | replication regulatory protein RepA | - |
| AN204_RS24395 () | 31455..32045 | - | 591 | WP_000766808.1 | DUF2726 domain-containing protein | - |
| AN204_RS24400 () | 32083..32292 | - | 210 | WP_001298565.1 | hemolysin expression modulator Hha | - |
| AN204_RS24405 () | 32338..32799 | - | 462 | WP_001233838.1 | thermonuclease family protein | - |
| AN204_RS24410 () | 33044..33256 | - | 213 | WP_042010713.1 | ANR family transcriptional regulator | - |
| AN204_RS24415 () | 33385..33945 | - | 561 | WP_000139321.1 | fertility inhibition protein FinO | - |
| AN204_RS24420 () | 34048..34908 | - | 861 | WP_000704523.1 | putative protein YcjY | VF |
| AN204_RS24425 () | 34967..35713 | - | 747 | WP_000205725.1 | conjugal transfer pilus acetylase TraX | - |
| AN204_RS24430 () | 35733..41003 | - | 5271 | WP_000948349.1 | Multifunctional conjugation protein TraI | Relaxase |
| AN204_RS24435 () | 41003..43147 | - | 2145 | WP_000009347.1 | type IV conjugative transfer system coupling protein TraD | - |
| AN204_RS24440 () | 43198..43935 | - | 738 | WP_000199901.1 | hypothetical protein | - |
| AN204_RS24445 () | 44138..44869 | - | 732 | WP_000782451.1 | complement resistance protein TraT | - |
| AN204_RS24450 () | 44918..45403 | - | 486 | WP_000605869.1 | hypothetical protein | - |
| AN204_RS24455 () | 45419..48241 | - | 2823 | WP_001007080.1 | conjugal transfer mating pair stabilization protein TraG | - |
| AN204_RS24460 () | 48238..49611 | - | 1374 | WP_000944331.1 | conjugal transfer protein TraH | - |
| AN204_RS24465 () | 49598..50023 | - | 426 | WP_001323332.1 | F-type conjugal transfer protein TrbF | - |
| AN204_RS24470 () | 49971..50318 | - | 348 | WP_001309242.1 | P-type conjugative transfer protein TrbJ | - |
| AN204_RS24475 () | 50248..50793 | - | 546 | WP_000059830.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| AN204_RS24480 () | 50780..51064 | - | 285 | WP_000624107.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| AN204_RS24485 () | 51145..51480 | + | 336 | WP_000736414.1 | hypothetical protein | - |
| AN204_RS26750 () | 51461..51802 | - | 342 | WP_001298557.1 | conjugal transfer protein TrbA | - |
| AN204_RS24490 () | 51816..52559 | - | 744 | WP_001030385.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| AN204_RS24495 () | 52552..52809 | - | 258 | WP_000864314.1 | conjugal transfer protein TrbE | - |
| AN204_RS24500 () | 52836..54686 | - | 1851 | WP_000821859.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| AN204_RS24505 () | 54683..55321 | - | 639 | WP_001080251.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| AN204_RS24510 () | 55330..55635 | - | 306 | WP_000224418.1 | hypothetical protein | - |
| AN204_RS24515 () | 55665..56657 | - | 993 | WP_000830838.1 | conjugal transfer pilus assembly protein TraU | - |
| AN204_RS24520 () | 56654..57286 | - | 633 | WP_001203736.1 | type-F conjugative transfer system protein TraW | - |
| AN204_RS24525 () | 57283..57669 | - | 387 | WP_000214082.1 | type-F conjugative transfer system protein TrbI | - |
| AN204_RS24530 () | 57666..60296 | - | 2631 | WP_000069778.1 | type IV secretion system protein TraC | - |
| AN204_RS24540 () | 60961..61434 | - | 474 | WP_000549566.1 | hypothetical protein | - |
| AN204_RS26755 () | 61427..61648 | - | 222 | WP_001278694.1 | conjugal transfer protein TraR | - |
| AN204_RS24545 () | 61783..62298 | - | 516 | WP_000809889.1 | type IV conjugative transfer system lipoprotein TraV | - |
| AN204_RS24550 () | 62295..62528 | - | 234 | WP_000235790.1 | conjugal transfer protein TrbG | - |
| AN204_RS24555 () | 62540..62893 | - | 354 | WP_071586423.1 | conjugal transfer protein TrbD | - |
| AN204_RS24560 () | 62847..63437 | - | 591 | WP_000002787.1 | conjugal transfer protein TraP | - |
| AN204_RS24565 () | 63427..64854 | - | 1428 | WP_000146665.1 | conjugal transfer protein TraB | - |
| AN204_RS24570 () | 64854..65558 | - | 705 | WP_072095570.1 | type-F conjugative transfer system secretin TraK | - |
| AN204_RS24575 () | 65569..66135 | - | 567 | WP_000399776.1 | type IV conjugative transfer system protein TraE | - |
| AN204_RS24580 () | 66157..66468 | - | 312 | WP_000012100.1 | type IV conjugative transfer system protein TraL | - |
| AN204_RS24585 () | 66483..66842 | - | 360 | WP_001098988.1 | type IV conjugative transfer system pilin TraA | - |
| AN204_RS24590 () | 66876..67103 | - | 228 | WP_001254388.1 | conjugal transfer relaxosome protein TraY | - |
| AN204_RS24595 () | 67197..67883 | - | 687 | WP_000332487.1 | PAS domain-containing protein | - |
| AN204_RS24600 () | 68077..68460 | - | 384 | WP_001151562.1 | relaxosome protein TraM | - |
| AN204_RS24605 () | 68791..69393 | + | 603 | WP_001323326.1 | hypothetical protein | VF |
| AN204_RS24610 () | 69689..70510 | - | 822 | WP_001234489.1 | DUF945 domain-containing protein | - |
| AN204_RS24615 () | 70629..70916 | - | 288 | WP_000107526.1 | hypothetical protein | - |
| AN204_RS24635 () | 71832..71990 | - | 159 | WP_001302184.1 | type I toxin-antitoxin system Hok family toxin | - |
| - () | 72055..72254 | - | 200 | NuclAT_0 | - | - |
| - () | 72055..72254 | - | 200 | NuclAT_0 | - | - |
| - () | 72055..72254 | - | 200 | NuclAT_0 | - | - |
| - () | 72055..72254 | - | 200 | NuclAT_0 | - | - |
| AN204_RS24645 () | 72266..72985 | - | 720 | WP_001276230.1 | plasmid SOS inhibition protein A | - |
| AN204_RS24650 () | 72982..73416 | - | 435 | WP_000845910.1 | conjugation system SOS inhibitor PsiB | - |
| AN204_RS24655 () | 73471..75429 | - | 1959 | WP_001145501.1 | ParB/RepB/Spo0J family partition protein | - |
| AN204_RS24660 () | 75488..75721 | - | 234 | WP_000006018.1 | DUF905 domain-containing protein | - |
| AN204_RS24665 () | 75778..76305 | - | 528 | WP_000290833.1 | single-stranded DNA-binding protein | - |
| AN204_RS27465 () | 76607..77059 | + | 453 | WP_024185774.1 | hypothetical protein | - |
| AN204_RS24675 () | 77145..77708 | - | 564 | WP_001298559.1 | class I SAM-dependent methyltransferase | - |
| AN204_RS24680 () | 77755..79116 | - | 1362 | WP_000170671.1 | DUF3560 domain-containing protein | - |
| AN204_RS24685 () | 79168..79398 | - | 231 | WP_000155844.1 | hypothetical protein | - |
| AN204_RS28270 () | 79911..80391 | + | 481 | Protein_90 | hypothetical protein | - |
| AN204_RS28275 () | 80361..80552 | - | 192 | WP_001027516.1 | hypothetical protein | - |
| AN204_RS24925 () | 80549..80971 | - | 423 | Protein_92 | DUF1380 family protein | - |
| AN204_RS24700 () | 81018..81320 | - | 303 | WP_001666994.1 | antirestriction protein | - |
| AN204_RS24705 () | 81859..82629 | - | 771 | WP_001004562.1 | hypothetical protein | - |
| AN204_RS24710 () | 82674..83108 | - | 435 | WP_000274508.1 | DUF1380 family protein | - |
| AN204_RS24715 () | 83122..83343 | - | 222 | WP_001104873.1 | hypothetical protein | - |
| AN204_RS24720 () | 83344..84027 | - | 684 | WP_000086169.1 | DNA methylase | - |
| AN204_RS27490 () | 84103..84414 | - | 312 | WP_001310011.1 | hypothetical protein | - |
| AN204_RS24730 () | 84411..84614 | - | 204 | WP_001298677.1 | hypothetical protein | - |
| AN204_RS24735 () | 84655..85827 | + | 1173 | WP_000952372.1 | IS21 family transposase IS21 | Transposase |
| AN204_RS24740 () | 85827..86624 | + | 798 | WP_000544830.1 | IS21 family transposase IS21 | Transposase |
| AN204_RS24745 () | 86618..87448 | - | 831 | WP_001298676.1 | DUF1281 domain-containing protein | - |
| AN204_RS24750 () | 87867..89087 | - | 1221 | WP_000343766.1 | ISL3 family transposase ISEc53 | Transposase |
| AN204_RS24755 () | 89106..89624 | - | 519 | WP_000115885.1 | hypothetical protein | VF |
| AN204_RS24760 () | 89759..90007 | + | 249 | WP_000619112.1 | DinI-like family protein | - |
| AN204_RS24765 () | 90004..90441 | + | 438 | WP_000109079.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| AN204_RS24770 () | 90441..91711 | + | 1271 | Protein_107 | translesion error-prone DNA polymerase V subunit UmuC | - |
| AN204_RS24775 () | 91716..92108 | - | 393 | WP_000340835.1 | plasmid partitioning/stability family protein | - |
| AN204_RS24780 () | 92113..93084 | - | 972 | WP_001103694.1 | hypothetical protein | - |
| AN204_RS24785 () | 93313..93957 | + | 645 | WP_000633911.1 | AAA family ATPase | - |
| AN204_RS24790 () | 93951..94226 | + | 276 | WP_000239529.1 | hypothetical protein | - |
| AN204_RS24795 () | 94364..95173 | - | 810 | WP_000016979.1 | site-specific integrase | - |
| AN204_RS24800 () | 95174..95479 | - | 306 | WP_001159871.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| AN204_RS24805 () | 95481..95699 | - | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| AN204_RS24810 () | 98021..98662 | + | 642 | WP_000990667.1 | hypothetical protein | - |
| AN204_RS24825 () | 99837..100814 | + | 978 | WP_001309253.1 | RepB family plasmid replication initiator protein | - |
| AN204_RS24830 () | 101057..101797 | - | 741 | WP_001066947.1 | IS91 family transposase ISMno23 | Transposase |
| AN204_RS24835 () | 101918..102106 | - | 189 | WP_001332784.1 | hypothetical protein | - |
| AN204_RS24840 () | 102473..103642 | + | 1170 | WP_001072358.1 | hypothetical protein | - |
| AN204_RS28035 () | 103868..104043 | - | 176 | Protein_120 | IS3 family transposase | - |
| AN204_RS26825 () | 104489..104761 | - | 273 | WP_001322642.1 | adhesin biosynthesis transcription regulatory family protein | - |
| AN204_RS24850 () | 105286..105722 | - | 437 | Protein_122 | IS3 family transposase IS2 | Transposase |
| AN204_RS24860 () | 106004..107974 | + | 1971 | WP_001298664.1 | Hemin receptor | VF |
| AN204_RS24865 () | 107981..108772 | + | 792 | WP_000977394.1 | DUF4198 domain-containing protein | - |
| AN204_RS26830 () | 108835..109443 | - | 609 | Protein_125 | IS66 family transposase ISEc22 | Transposase |
| AN204_RS24875 () | 109511..110293 | - | 783 | WP_001300609.1 | IS21 family transposase IS100kyp | Transposase |
| AN204_RS24880 () | 110290..111312 | - | 1023 | WP_001310017.1 | IS21 family transposase IS100kyp | Transposase |
| AN204_RS24935 () | 111398..112343 | - | 946 | Protein_128 | IS66 family transposase ISEc8 | Transposase |
| AN204_RS24895 () | 112392..112739 | - | 348 | WP_000612626.1 | IS66 family transposase ISKpn24 | Transposase |
| AN204_RS24900 () | 112736..113140 | - | 405 | WP_000839179.1 | IS66 family transposase ISEc22 | Transposase |
| AN204_RS24905 () | 113169..113552 | - | 384 | Protein_131 | IS3 family transposase IS629 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|