MGE detailed information
MGE type: Genomic_island MGE length: 20255 bp
Accession: NZ_CP012631 Location: 3861485..3881739 Organism: Escherichia coli strain SF-173 Replicon: chromosome
Accession: NZ_CP012631 Location: 3861485..3881739 Organism: Escherichia coli strain SF-173 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AN205_RS19285 () | 3856850..3857308 | - | 459 | WP_001291988.1 | xanthine phosphoribosyltransferase | - |
| AN205_RS19290 () | 3857569..3859026 | + | 1458 | WP_053811560.1 | cytosol nonspecific dipeptidase | - |
| AN205_RS19295 () | 3859083..3859697 | - | 615 | WP_000602123.1 | peptide chain release factor H | - |
| AN205_RS19300 () | 3859694..3860833 | - | 1140 | WP_000521577.1 | RNA ligase RtcB family protein | - |
| AN205_RS19305 () | 3861023..3861475 | - | 453 | WP_001059895.1 | GNAT family N-acetyltransferase | - |
| AN205_RS19310 () | 3861485..3861883 | - | 399 | WP_001263500.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| AN205_RS19315 () | 3861886..3862179 | - | 294 | WP_000554758.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| AN205_RS19320 () | 3862231..3863286 | - | 1056 | WP_001226168.1 | DNA polymerase IV | - |
| AN205_RS19325 () | 3863357..3864142 | - | 786 | WP_000207544.1 | Chemotaxis protein LafU | VF |
| AN205_RS19330 () | 3864114..3865826 | + | 1713 | Protein_3710 | Flagellar biosynthesis protein FlhA | VF |
| AN205_RS19335 () | 3866046..3866543 | - | 498 | WP_000006241.1 | REP-associated tyrosine transposase RayT | - |
| AN205_RS19340 () | 3866719..3867468 | - | 750 | WP_000093936.1 | Murein DD-endopeptidase MepH | VF |
| AN205_RS19345 () | 3867780..3868520 | + | 741 | WP_001225679.1 | murein L,D-transpeptidase | - |
| AN205_RS19350 () | 3868491..3869258 | - | 768 | WP_001331866.1 | class II glutamine amidotransferase | - |
| AN205_RS19355 () | 3869463..3870041 | - | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| AN205_RS19360 () | 3870281..3872725 | + | 2445 | WP_000973137.1 | Acyl-coenzyme A dehydrogenase | VF |
| AN205_RS19365 () | 3872768..3873214 | - | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| AN205_RS19370 () | 3873395..3874165 | + | 771 | WP_001118042.1 | 2-oxoglutaramate amidase | - |
| AN205_RS28665 () | 3874216..3874410 | - | 195 | Protein_3719 | transposase | - |
| AN205_RS19375 () | 3874436..3874924 | - | 489 | WP_001298174.1 | integrating conjugative element protein | - |
| AN205_RS19380 () | 3875018..3875521 | - | 504 | WP_000227712.1 | hypothetical protein | - |
| AN205_RS28060 () | 3875750..3876514 | - | 765 | Protein_3722 | ISAs1 family transposase ISEc1 | Transposase |
| AN205_RS19395 () | 3876772..3877062 | - | 291 | WP_000513317.1 | hypothetical protein | - |
| AN205_RS19400 () | 3877037..3878476 | - | 1440 | WP_000528852.1 | DUF4150 domain-containing protein | - |
| AN205_RS19405 () | 3878469..3879515 | - | 1047 | WP_000571853.1 | DUF2169 domain-containing protein | - |
| AN205_RS19410 () | 3879622..3881604 | - | 1983 | WP_000053636.1 | Actin cross-linking toxin VgrG1 | VF |
| AN205_RS19420 () | 3881825..3882343 | - | 519 | WP_001142963.1 | Hcp family type VI secretion system effector | - |
| AN205_RS19425 () | 3883049..3883552 | + | 504 | WP_000041480.1 | type VI secretion system contractile sheath small subunit | - |
| AN205_RS19430 () | 3883575..3885059 | + | 1485 | WP_000111582.1 | type VI secretion system contractile sheath large subunit | - |
| AN205_RS19435 () | 3885064..3885489 | + | 426 | WP_000946068.1 | type VI secretion system baseplate subunit TssE | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|