MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 57431 bp
Accession: NZ_CP012509 Location: 1..57431 Organism: Piscirickettsia salmonis strain PM32597B1 Replicon: plasmid pPSB1-1
Accession: NZ_CP012509 Location: 1..57431 Organism: Piscirickettsia salmonis strain PM32597B1 Replicon: plasmid pPSB1-1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KU39_RS15710 () | 46..1908 | + | 1863 | WP_027242576.1 | RecX family transcriptional regulator | - |
| KU39_RS15715 () | 1942..2427 | + | 486 | WP_027242575.1 | hypothetical protein | - |
| KU39_RS15720 () | 2438..2665 | - | 228 | Protein_2 | transposase | - |
| KU39_RS21075 () | 2661..2813 | + | 153 | WP_155046643.1 | IS30 family transposase IS4351 | Transposase |
| KU39_RS15725 () | 2861..3868 | - | 1008 | WP_036774189.1 | IS3 family transposase ISGur10 | Transposase |
| KU39_RS20205 () | 3868..4125 | - | 258 | WP_098082828.1 | IS3 family transposase ISGur10 | Transposase |
| KU39_RS19025 () | 4358..5275 | + | 918 | Protein_6 | IS30 family transposase IS1655 | Transposase |
| KU39_RS15740 () | 5392..5856 | + | 465 | WP_036774631.1 | hypothetical protein | - |
| KU39_RS19030 () | 5915..6055 | - | 141 | Protein_8 | helix-turn-helix domain-containing protein | - |
| KU39_RS19035 () | 6219..6365 | + | 147 | WP_157894761.1 | transposase zinc-binding domain-containing protein | - |
| KU39_RS15750 () | 7082..7222 | - | 141 | Protein_10 | IS30 family transposase ISLga1 | Transposase |
| KU39_RS15755 () | 7395..7613 | + | 219 | WP_155046644.1 | hypothetical protein | - |
| KU39_RS15760 () | 7939..8211 | - | 273 | WP_016211910.1 | Txe/YoeB family addiction module toxin | Toxin Detail |
| KU39_RS15765 () | 8215..8475 | - | 261 | WP_032126795.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| KU39_RS15770 () | 8748..9338 | + | 591 | WP_027242600.1 | site-specific integrase | - |
| KU39_RS19040 () | 9366..10769 | - | 1404 | WP_048876031.1 | IS4 family transposase ISArch10 | Transposase |
| KU39_RS19045 () | 11473..12318 | - | 846 | Protein_16 | IS982 family transposase | - |
| KU39_RS15795 () | 12866..13990 | - | 1125 | WP_047927063.1 | hypothetical protein | - |
| KU39_RS15800 () | 13990..14316 | - | 327 | WP_047927062.1 | hypothetical protein | - |
| KU39_RS15805 () | 14845..15054 | + | 210 | WP_047927061.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| KU39_RS15810 () | 15044..15904 | + | 861 | WP_047927060.1 | ParA family protein | - |
| KU39_RS15815 () | 15901..16749 | + | 849 | WP_036774869.1 | ParB/RepB/Spo0J family partition protein | - |
| KU39_RS15820 () | 17193..18488 | + | 1296 | WP_027242605.1 | glutamate-1-semialdehyde 2,1-aminomutase | - |
| KU39_RS15825 () | 18783..19523 | + | 741 | WP_036775038.1 | ester cyclase | - |
| KU39_RS15830 () | 19509..20180 | - | 672 | WP_036775037.1 | HAD family hydrolase | - |
| KU39_RS15835 () | 20186..20971 | - | 786 | WP_053063426.1 | class I SAM-dependent methyltransferase | - |
| KU39_RS15840 () | 21091..21447 | - | 357 | WP_047927058.1 | hypothetical protein | - |
| KU39_RS15845 () | 21526..21804 | + | 279 | WP_036774994.1 | hypothetical protein | - |
| KU39_RS15850 () | 22010..22264 | + | 255 | WP_144420828.1 | hypothetical protein | - |
| KU39_RS15855 () | 22462..22779 | + | 318 | WP_052106244.1 | hypothetical protein | - |
| KU39_RS15860 () | 22795..23085 | + | 291 | WP_036775000.1 | type IV conjugative transfer system protein TraL | - |
| KU39_RS15865 () | 23093..23662 | + | 570 | WP_047927056.1 | hypothetical protein | - |
| KU39_RS15870 () | 23655..24359 | + | 705 | WP_051929536.1 | type-F conjugative transfer system secretin TraK | - |
| KU39_RS15875 () | 24369..25838 | + | 1470 | WP_051929537.1 | TraB/VirB10 family protein | - |
| KU39_RS19050 () | 25841..26287 | + | 447 | WP_065653727.1 | type IV conjugative transfer system lipoprotein TraV | - |
| KU39_RS15885 () | 26300..28879 | + | 2580 | WP_036774456.1 | type IV secretion system protein TraC | - |
| KU39_RS15890 () | 28866..29213 | + | 348 | WP_036774457.1 | TrbI F-type domain-containing protein | - |
| KU39_RS15895 () | 29206..29823 | + | 618 | WP_036773375.1 | type-F conjugative transfer system protein TraW | - |
| KU39_RS15900 () | 29928..30917 | + | 990 | WP_036773373.1 | conjugal transfer pilus assembly protein TraU | - |
| KU39_RS15905 () | 30926..31591 | + | 666 | WP_036773372.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| KU39_RS15910 () | 31597..33495 | + | 1899 | WP_036773369.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| KU39_RS15915 () | 33492..34304 | + | 813 | WP_036773367.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| KU39_RS15920 () | 34301..34792 | + | 492 | WP_027242554.1 | conjugal transfer protein TraF | - |
| KU39_RS15925 () | 34785..36167 | + | 1383 | WP_027242553.1 | conjugal transfer protein TraH | - |
| KU39_RS15930 () | 36169..38958 | + | 2790 | WP_027242552.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| KU39_RS15935 () | 38975..39292 | - | 318 | WP_027242551.1 | hypothetical protein | - |
| KU39_RS15940 () | 39375..40118 | + | 744 | WP_027242550.1 | complement resistance protein TraT | - |
| KU39_RS15945 () | 40157..40477 | + | 321 | WP_027242549.1 | hypothetical protein | - |
| KU39_RS15950 () | 40488..42485 | + | 1998 | WP_052106227.1 | type IV conjugative transfer system coupling protein TraD | - |
| KU39_RS15955 () | 42485..43237 | + | 753 | WP_027242548.1 | DsbA family protein | - |
| KU39_RS15960 () | 43249..43455 | + | 207 | WP_027242547.1 | hypothetical protein | - |
| KU39_RS15965 () | 43524..49394 | + | 5871 | WP_075275450.1 | Multifunctional conjugation protein TraI | Relaxase |
| KU39_RS15970 () | 49389..49718 | - | 330 | WP_036774904.1 | hypothetical protein | - |
| KU39_RS15975 () | 49709..50152 | - | 444 | WP_036774901.1 | hypothetical protein | - |
| KU39_RS15980 () | 50738..51031 | + | 294 | WP_036774899.1 | hypothetical protein | - |
| KU39_RS15985 () | 51095..51883 | - | 789 | WP_047927050.1 | hypothetical protein | - |
| KU39_RS15990 () | 51943..52506 | - | 564 | WP_036816706.1 | DnaJ domain-containing protein | - |
| KU39_RS15995 () | 52575..52946 | - | 372 | WP_047927049.1 | hypothetical protein | - |
| KU39_RS16000 () | 53373..53627 | + | 255 | WP_144420829.1 | hypothetical protein | - |
| KU39_RS16005 () | 53804..55990 | + | 2187 | WP_027242581.1 | ATP-dependent RecD-like DNA helicase | - |
| KU39_RS16010 () | 56000..56401 | - | 402 | WP_027242582.1 | helix-turn-helix domain-containing protein | - |
| KU39_RS16015 () | 56398..56709 | - | 312 | WP_027242583.1 | type II toxin-antitoxin system HigB family toxin | - |
| KU39_RS20210 () | 57066..57380 | - | 315 | WP_036774182.1 | WGR domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|