MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 19671 bp
Accession: NZ_CP012277 Location: 1..19671 Organism: Pediococcus damnosus strain TMW 2.1533 Replicon: plasmid pL21533-2
Accession: NZ_CP012277 Location: 1..19671 Organism: Pediococcus damnosus strain TMW 2.1533 Replicon: plasmid pL21533-2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ADU70_RS11635 () | 827..1384 | - | 558 | WP_158509302.1 | IS3 family transposase IS1520 | Transposase |
| ADU70_RS10430 () | 2141..2485 | - | 345 | WP_001748110.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| ADU70_RS10435 () | 2479..2742 | - | 264 | WP_062904615.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| ADU70_RS10440 () | 2828..3415 | + | 588 | WP_062904616.1 | site-specific integrase | - |
| ADU70_RS10445 () | 3869..4168 | + | 300 | Protein_4 | IS30 family transposase IS1139 | Transposase |
| ADU70_RS10450 () | 4297..4845 | + | 549 | WP_080945468.1 | NUMOD4 motif-containing HNH endonuclease | - |
| ADU70_RS10455 () | 5043..5501 | + | 459 | WP_062904617.1 | phage terminase small subunit P27 family | - |
| ADU70_RS11900 () | 5515..5667 | - | 153 | WP_155386924.1 | hypothetical protein | - |
| ADU70_RS10460 () | 5654..6073 | - | 420 | WP_046870702.1 | hypothetical protein | - |
| ADU70_RS10465 () | 6388..7995 | - | 1608 | WP_062904618.1 | hypothetical protein | - |
| ADU70_RS10470 () | 7955..8788 | - | 834 | WP_062904619.1 | bifunctional DNA primase/polymerase | - |
| ADU70_RS10475 () | 8785..9039 | - | 255 | WP_062904620.1 | hypothetical protein | - |
| ADU70_RS10480 () | 9186..9389 | - | 204 | WP_081115641.1 | helix-turn-helix domain-containing protein | - |
| ADU70_RS10485 () | 9521..10183 | + | 663 | WP_062904621.1 | helix-turn-helix transcriptional regulator | - |
| ADU70_RS10490 () | 10271..10531 | - | 261 | WP_062904622.1 | hypothetical protein | - |
| ADU70_RS10495 () | 11631..12137 | - | 507 | WP_046870698.1 | hypothetical protein | - |
| ADU70_RS10500 () | 12207..12566 | - | 360 | WP_046870705.1 | hypothetical protein | - |
| ADU70_RS10510 () | 13499..14428 | + | 930 | WP_024855727.1 | IS30 family transposase ISLpl1 | Transposase |
| ADU70_RS10515 () | 14550..15317 | + | 768 | WP_046870855.1 | Sulfate/thiosulfate import ATP-binding protein CysA | VF |
| ADU70_RS10520 () | 15557..16126 | - | 570 | WP_145913144.1 | hypothetical protein | - |
| ADU70_RS11645 () | 16104..19508 | - | 3405 | WP_081115644.1 | Glucosyltransferase-SI | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|