MGE detailed information
MGE type: Genomic_island MGE length: 10452 bp
Accession: NZ_CP012179 Location: 5170667..5181118 Organism: Pseudomonas syringae pv. actinidiae ICMP 18708 Replicon: chromosome
Accession: NZ_CP012179 Location: 5170667..5181118 Organism: Pseudomonas syringae pv. actinidiae ICMP 18708 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NZ708_RS23240 () | 5165684..5165947 | + | 264 | WP_017683360.1 | hypothetical protein | - |
| NZ708_RS23245 () | 5166075..5167955 | - | 1881 | WP_003382247.1 | methyl-accepting chemotaxis protein | - |
| NZ708_RS23250 () | 5168314..5170236 | + | 1923 | WP_017683359.1 | methyl-accepting chemotaxis protein | - |
| NZ708_RS23255 () | 5170401..5170667 | + | 267 | WP_003382249.1 | ribbon-helix-helix domain-containing protein | - |
| NZ708_RS23260 () | 5170667..5170942 | + | 276 | WP_017683357.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| NZ708_RS23265 () | 5171514..5172782 | + | 1269 | WP_007244158.1 | OprD family porin | - |
| NZ708_RS23270 () | 5172961..5173785 | + | 825 | WP_003380380.1 | NAD(P)-dependent oxidoreductase | - |
| NZ708_RS23275 () | 5173845..5174729 | + | 885 | WP_003380378.1 | 6-deoxy-6-sulfogluconolactonase | VF |
| NZ708_RS23280 () | 5174786..5175825 | + | 1040 | Protein_4563 | TRAP transporter substrate-binding protein | - |
| NZ708_RS23285 () | 5175889..5176416 | + | 528 | WP_003380373.1 | TRAP transporter small permease | - |
| NZ708_RS23290 () | 5176417..5177697 | + | 1281 | WP_003380372.1 | TRAP transporter large permease | - |
| NZ708_RS23295 () | 5177781..5178751 | + | 971 | Protein_4566 | DMT family transporter | - |
| NZ708_RS23300 () | 5178726..5179607 | + | 882 | WP_003380368.1 | aldose 1-epimerase | - |
| NZ708_RS23305 () | 5179722..5179952 | + | 231 | WP_003380366.1 | antitoxin | Antitoxin Detail |
| NZ708_RS23310 () | 5179952..5180356 | + | 405 | WP_003380365.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| NZ708_RS32280 () | 5180543..5181118 | - | 576 | WP_019334082.1 | hypothetical protein | - |
| NZ708_RS23315 () | 5181117..5181305 | + | 189 | WP_003380363.1 | hypothetical protein | - |
| NZ708_RS23320 () | 5181541..5182053 | + | 513 | WP_003380362.1 | sigma-70 family RNA polymerase sigma factor | - |
| NZ708_RS23325 () | 5182053..5182715 | + | 663 | WP_003380361.1 | ChrR family anti-sigma-E factor | - |
| NZ708_RS23330 () | 5182791..5183027 | - | 237 | WP_003380360.1 | hypothetical protein | - |
| NZ708_RS23335 () | 5183092..5184348 | - | 1257 | WP_003380359.1 | 3-phosphoshikimate 1-carboxyvinyltransferase | - |
| NZ708_RS23340 () | 5184444..5184926 | - | 483 | WP_003380358.1 | PAS domain-containing protein | - |
| NZ708_RS23345 () | 5184930..5185934 | - | 1005 | WP_003380357.1 | response regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|