MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 58945 bp
Accession: NZ_CP012061 Location: 1..58945 Organism: Xanthomonas sp. ISO98C4 Replicon: plasmid pNX59
Accession: NZ_CP012061 Location: 1..58945 Organism: Xanthomonas sp. ISO98C4 Replicon: plasmid pNX59
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AC801_RS23985 () | 1..594 | - | 594 | WP_039572164.1 | hypothetical protein | - |
| AC801_RS23990 () | 608..847 | - | 240 | WP_039572160.1 | hypothetical protein | - |
| AC801_RS24885 () | 844..1005 | - | 162 | WP_157926053.1 | hypothetical protein | - |
| AC801_RS23995 () | 1078..1476 | - | 399 | WP_039572158.1 | hypothetical protein | - |
| AC801_RS24000 () | 1831..2121 | - | 291 | WP_127446651.1 | hypothetical protein | - |
| AC801_RS24005 () | 2142..2417 | - | 276 | WP_039572155.1 | hypothetical protein | - |
| AC801_RS24010 () | 2821..3144 | - | 324 | WP_039572152.1 | hypothetical protein | - |
| AC801_RS24020 () | 3491..3745 | + | 255 | WP_039572150.1 | hypothetical protein | - |
| AC801_RS24025 () | 3801..3995 | + | 195 | WP_080948835.1 | ribbon-helix-helix domain-containing protein | - |
| AC801_RS24030 () | 3971..5782 | + | 1812 | WP_039572147.1 | Eco57I restriction-modification methylase domain-containing protein | - |
| AC801_RS24035 () | 5779..6873 | + | 1095 | WP_157926052.1 | restriction endonuclease | - |
| AC801_RS24040 () | 6997..7485 | - | 489 | Protein_11 | hypothetical protein | - |
| AC801_RS24050 () | 7557..8644 | + | 1088 | WP_087944778.1 | IS3 family transposase ISXac2 | Transposase |
| AC801_RS25025 () | 8686..9021 | - | 336 | WP_204250667.1 | hypothetical protein | - |
| AC801_RS24070 () | 9463..9795 | - | 333 | Protein_14 | IS256 family transposase ISXax1 | Transposase |
| AC801_RS24090 () | 10995..11888 | - | 894 | Protein_16 | IS256 family transposase ISXax1 | Transposase |
| AC801_RS24095 () | 11929..12057 | + | 129 | Protein_17 | IS5/IS1182 family transposase | - |
| AC801_RS24100 () | 12161..13201 | - | 1041 | WP_127447088.1 | acyltransferase | - |
| AC801_RS24105 () | 13361..13681 | - | 321 | WP_039573992.1 | hypothetical protein | - |
| AC801_RS24110 () | 13725..13955 | - | 231 | WP_039573988.1 | hypothetical protein | - |
| AC801_RS24115 () | 13952..14263 | - | 312 | WP_039573986.1 | hypothetical protein | - |
| AC801_RS24120 () | 14405..14926 | - | 522 | WP_127446652.1 | hypothetical protein | - |
| AC801_RS24125 () | 14948..16172 | - | 1225 | Protein_23 | IS256 family transposase ISXax1 | Transposase |
| AC801_RS24130 () | 16153..16380 | - | 228 | WP_039575439.1 | hypothetical protein | - |
| AC801_RS24135 () | 16377..16718 | - | 342 | WP_039575442.1 | hypothetical protein | - |
| AC801_RS24140 () | 18342..18818 | + | 477 | WP_039575298.1 | hypothetical protein | - |
| AC801_RS24145 () | 18892..19416 | + | 525 | Protein_27 | Type IV secretion system protein virB1 | VF |
| AC801_RS25030 () | 20636..21021 | - | 386 | Protein_29 | IS3 family transposase ISXcd1 | Transposase |
| AC801_RS24165 () | 21054..24083 | - | 3030 | WP_022560486.1 | Tn3 family transposase ISPsy42 | Transposase |
| AC801_RS24170 () | 24080..24673 | - | 594 | WP_022560487.1 | Tn3 family transposase TnpR_ISPsy30 | Transposase |
| AC801_RS24175 () | 24885..25139 | + | 255 | WP_022557731.1 | plasmid stability protein | Antitoxin Detail |
| AC801_RS24180 () | 25136..25552 | + | 417 | WP_022557732.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| AC801_RS24185 () | 25566..26120 | + | 555 | WP_033482006.1 | plasmid pRiA4b ORF-3 family protein | - |
| AC801_RS24190 () | 26195..26332 | - | 138 | Protein_35 | IS3 family transposase ISXcd1 | Transposase |
| AC801_RS24195 () | 26402..26932 | - | 531 | Protein_36 | DNA topoisomerase III | - |
| AC801_RS24200 () | 27084..28376 | - | 1293 | WP_033481893.1 | hypothetical protein | - |
| AC801_RS24205 () | 28503..29822 | - | 1320 | WP_022557736.1 | DUF4990 domain-containing protein | - |
| AC801_RS24215 () | 30221..31051 | - | 831 | Protein_39 | DNA topoisomerase III | - |
| AC801_RS24220 () | 31053..31301 | - | 249 | WP_033481882.1 | hypothetical protein | - |
| AC801_RS24225 () | 31374..31613 | - | 240 | WP_005997461.1 | hypothetical protein | - |
| AC801_RS24230 () | 31624..31830 | - | 207 | WP_017164026.1 | hypothetical protein | - |
| AC801_RS24235 () | 32003..33355 | - | 1353 | WP_046735872.1 | TrbI/VirB10 family protein | - |
| AC801_RS24240 () | 33371..34363 | - | 993 | WP_017164024.1 | P-type conjugative transfer protein TrbG | - |
| AC801_RS24245 () | 34390..35100 | - | 711 | WP_039574290.1 | type IV secretory pathway, TrbF protein | - |
| AC801_RS24250 () | 35107..36585 | - | 1479 | WP_046735871.1 | P-type conjugative transfer protein TrbL | - |
| AC801_RS24255 () | 36803..37156 | - | 354 | WP_127446653.1 | hypothetical protein | - |
| AC801_RS24260 () | 37153..37926 | - | 774 | WP_039570072.1 | conjugal transfer protein | - |
| AC801_RS24265 () | 37945..40515 | - | 2571 | WP_039570074.1 | DUF853 family protein | - |
| AC801_RS24270 () | 40582..40815 | - | 234 | WP_074052351.1 | VirB3 family type IV secretion system protein | - |
| AC801_RS24275 () | 40851..41171 | - | 321 | WP_017162817.1 | TrbC/VirB2 family protein | - |
| AC801_RS24280 () | 41246..42250 | - | 1005 | WP_017164019.1 | Putative conjugal transfer protein | VF |
| AC801_RS24285 () | 42335..42544 | - | 210 | WP_017164018.1 | helix-turn-helix domain-containing protein | - |
| AC801_RS24290 () | 43247..44065 | - | 819 | WP_039587854.1 | hypothetical protein | - |
| AC801_RS24295 () | 44641..45030 | - | 390 | WP_039587855.1 | hypothetical protein | - |
| AC801_RS24300 () | 45173..45619 | - | 447 | WP_039572194.1 | avidin/streptavidin family protein | - |
| AC801_RS24305 () | 45949..46233 | + | 285 | WP_039572192.1 | hypothetical protein | - |
| AC801_RS24310 () | 46399..46938 | - | 540 | WP_022557742.1 | plasmid pRiA4b ORF-3 family protein | - |
| AC801_RS24315 () | 46971..47462 | - | 492 | WP_017171863.1 | hypothetical protein | - |
| AC801_RS25035 () | 47459..48731 | - | 1273 | Protein_60 | Conjugal transfer protein TraG | VF |
| AC801_RS24325 () | 49515..52145 | - | 2631 | WP_039572187.1 | hypothetical protein | Relaxase |
| AC801_RS24330 () | 52756..53346 | - | 591 | WP_052756669.1 | Type IV secretion system protein virB1 | VF |
| AC801_RS24335 () | 53339..53935 | - | 597 | WP_080948837.1 | S26 family signal peptidase | - |
| AC801_RS24340 () | 53940..54404 | - | 465 | WP_022557748.1 | DUF2840 domain-containing protein | - |
| AC801_RS24345 () | 54648..54983 | - | 336 | WP_039572180.1 | hypothetical protein | - |
| AC801_RS24350 () | 54980..55615 | - | 636 | WP_039572177.1 | AAA family ATPase | - |
| AC801_RS24355 () | 55687..56025 | + | 339 | WP_099859120.1 | hypothetical protein | - |
| AC801_RS24360 () | 56633..57454 | - | 822 | WP_039572173.1 | hypothetical protein | - |
| AC801_RS24365 () | 57808..58392 | - | 585 | WP_039572170.1 | hypothetical protein | - |
| AC801_RS24370 () | 58504..58848 | - | 345 | WP_039572167.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|