MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 70356 bp
Accession: NZ_CP012060 Location: 5117076..5187431 Organism: Xanthomonas sp. ISO98C4 Replicon: chromosome
Accession: NZ_CP012060 Location: 5117076..5187431 Organism: Xanthomonas sp. ISO98C4 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AC801_RS23425 () | 5112207..5113571 | + | 1365 | WP_127446627.1 | PrgH/EprH family type III secretion apparatus protein | - |
| AC801_RS23430 () | 5113568..5113873 | + | 306 | WP_080950357.1 | type III secretion system needle filament subunit SctF | - |
| AC801_RS23435 () | 5113939..5114223 | + | 285 | WP_039571032.1 | type III secretion system inner rod subunit SctI | - |
| AC801_RS23440 () | 5114230..5115111 | + | 882 | WP_127446628.1 | type III secretion inner membrane ring lipoprotein SctJ | - |
| AC801_RS23445 () | 5115108..5115704 | + | 597 | WP_080949130.1 | hypothetical protein | - |
| AC801_RS23450 () | 5115676..5116350 | + | 675 | WP_039571029.1 | hypothetical protein | - |
| AC801_RS23455 () | 5116347..5116580 | + | 234 | WP_039571027.1 | hypothetical protein | - |
| AC801_RS23460 () | 5116762..5117076 | + | 315 | WP_039571026.1 | DUF1153 domain-containing protein | - |
| AC801_RS23465 () | 5117076..5117891 | + | 816 | WP_039571024.1 | IS3 family transposase ISKpn40 | Transposase |
| AC801_RS23470 () | 5118000..5118221 | + | 222 | WP_127446629.1 | hypothetical protein | - |
| AC801_RS24865 () | 5118882..5119184 | + | 303 | WP_039575112.1 | hypothetical protein | - |
| AC801_RS23475 () | 5119360..5119650 | + | 291 | WP_127446630.1 | hypothetical protein | - |
| AC801_RS23480 () | 5119728..5119988 | + | 261 | WP_039575117.1 | hypothetical protein | - |
| AC801_RS23485 () | 5119978..5121213 | + | 1236 | WP_039575118.1 | hypothetical protein ; Integrase | Integrase |
| AC801_RS23490 () | 5121406..5122440 | + | 1035 | WP_039575120.1 | hypothetical protein | - |
| AC801_RS23495 () | 5122763..5123059 | - | 297 | WP_074052318.1 | hypothetical protein | - |
| AC801_RS23500 () | 5123586..5123993 | + | 408 | WP_127446631.1 | hypothetical protein | - |
| AC801_RS23505 () | 5123952..5125487 | - | 1536 | WP_080948716.1 | MASE1 domain-containing protein | - |
| AC801_RS24870 () | 5125862..5126602 | + | 741 | WP_150115861.1 | hypothetical protein | - |
| AC801_RS23510 () | 5126505..5127074 | + | 570 | WP_080950356.1 | HD domain-containing protein | - |
| AC801_RS23515 () | 5127942..5128121 | - | 180 | Protein_4354 | hypothetical protein | - |
| AC801_RS23525 () | 5129156..5129893 | - | 738 | WP_039574675.1 | hypothetical protein | - |
| AC801_RS23530 () | 5129898..5130920 | - | 1023 | WP_127447083.1 | conjugal transfer protein TraN | - |
| AC801_RS23535 () | 5131060..5132043 | + | 984 | WP_022557821.1 | IS5 family transposase ISXfu1 | Transposase |
| AC801_RS23540 () | 5132147..5132911 | - | 765 | WP_127446633.1 | hypothetical protein | - |
| AC801_RS23545 () | 5132928..5134085 | - | 1158 | WP_074052150.1 | TraU family protein | - |
| AC801_RS23550 () | 5134082..5134387 | - | 306 | WP_127446634.1 | hypothetical protein | - |
| AC801_RS23570 () | 5135671..5136558 | - | 888 | WP_164747947.1 | hypothetical protein | - |
| AC801_RS23575 () | 5136594..5137115 | - | 522 | WP_127446636.1 | S26 family signal peptidase | - |
| AC801_RS23580 () | 5137112..5137348 | - | 237 | WP_046736092.1 | hypothetical protein | - |
| AC801_RS23585 () | 5137386..5138530 | + | 1145 | WP_099770634.1 | IS3 family transposase ISXac3 | Transposase |
| AC801_RS23590 () | 5138661..5141093 | - | 2433 | WP_039575802.1 | type IV secretion system protein TraC | - |
| AC801_RS23595 () | 5141112..5141480 | - | 369 | WP_039575799.1 | hypothetical protein | - |
| AC801_RS23600 () | 5141499..5142188 | - | 690 | WP_127446637.1 | TraV family lipoprotein | - |
| AC801_RS23605 () | 5142261..5143271 | - | 1011 | WP_164747948.1 | TraB/VirB10 family protein | - |
| AC801_RS23615 () | 5143485..5144572 | + | 1088 | WP_087944778.1 | IS3 family transposase ISXac2 | Transposase |
| AC801_RS23625 () | 5144611..5144853 | + | 243 | Protein_4371 | restriction endonuclease | - |
| AC801_RS24875 () | 5146034..5146351 | - | 318 | WP_052756666.1 | hypothetical protein | - |
| AC801_RS23640 () | 5146351..5146662 | - | 312 | WP_052756667.1 | hypothetical protein | - |
| AC801_RS23645 () | 5146655..5147362 | - | 708 | WP_127446638.1 | hypothetical protein | - |
| AC801_RS23650 () | 5147444..5147635 | - | 192 | WP_080948735.1 | hypothetical protein | - |
| AC801_RS23655 () | 5148054..5151701 | - | 3648 | WP_039574563.1 | urea carboxylase | - |
| AC801_RS23660 () | 5151785..5153584 | - | 1800 | WP_039574561.1 | allophanate hydrolase | - |
| AC801_RS23665 () | 5153934..5154410 | - | 477 | WP_039574558.1 | nuclear transport factor 2 family protein | - |
| AC801_RS23670 () | 5154474..5155073 | - | 600 | WP_201417374.1 | TetR family transcriptional regulator | - |
| AC801_RS23675 () | 5155160..5155732 | - | 573 | WP_017158948.1 | TetR/AcrR family transcriptional regulator | - |
| AC801_RS23680 () | 5155817..5156560 | + | 744 | WP_039574556.1 | Glucose 1-dehydrogenase | VF |
| AC801_RS23685 () | 5156926..5157444 | - | 519 | WP_039574553.1 | hypothetical protein | - |
| AC801_RS23690 () | 5157472..5157849 | - | 378 | Protein_4384 | hypothetical protein | - |
| AC801_RS23695 () | 5157872..5158141 | - | 270 | WP_080948736.1 | hypothetical protein | - |
| AC801_RS23700 () | 5158437..5158769 | + | 333 | WP_003482333.1 | hypothetical protein | - |
| AC801_RS23710 () | 5159084..5161009 | + | 1926 | WP_039574551.1 | M61 family metallopeptidase | - |
| AC801_RS25015 () | 5161077..5161256 | + | 180 | WP_039574549.1 | hypothetical protein | - |
| AC801_RS23720 () | 5161359..5162747 | - | 1389 | WP_039574546.1 | nucleoside hydrolase | - |
| AC801_RS23730 () | 5163102..5163392 | - | 291 | WP_017156025.1 | HigA family addiction module antidote protein | Antitoxin Detail |
| AC801_RS25020 () | 5163410..5163550 | - | 141 | WP_201417376.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| AC801_RS23740 () | 5163788..5166295 | - | 2508 | WP_046834789.1 | AAA family ATPase | - |
| AC801_RS23745 () | 5166483..5170469 | - | 3987 | WP_039569010.1 | exodeoxyribonuclease V subunit beta | - |
| AC801_RS23750 () | 5170466..5173870 | - | 3405 | WP_039569011.1 | exodeoxyribonuclease V subunit gamma | - |
| AC801_RS23755 () | 5174223..5178962 | - | 4740 | WP_039569012.1 | autotransporter domain-containing protein | - |
| AC801_RS23760 () | 5179260..5179811 | + | 552 | WP_017165353.1 | phage tail protein | - |
| AC801_RS23765 () | 5179859..5180386 | + | 528 | WP_039569016.1 | phage tail protein | - |
| AC801_RS23770 () | 5180446..5180981 | + | 536 | Protein_4398 | phage tail protein | - |
| AC801_RS23775 () | 5180991..5181539 | + | 549 | WP_039569019.1 | hypothetical protein | VF |
| AC801_RS23780 () | 5181558..5181845 | - | 288 | WP_017158959.1 | hypothetical protein | - |
| AC801_RS23785 () | 5182227..5183021 | + | 795 | WP_017156015.1 | putative phospholipid import ATP-binding protein MlaF | VF |
| AC801_RS23790 () | 5183021..5183770 | + | 750 | WP_011349188.1 | MlaE family lipid ABC transporter permease subunit | - |
| AC801_RS23795 () | 5183782..5184327 | + | 546 | WP_005912377.1 | outer membrane lipid asymmetry maintenance protein MlaD | - |
| AC801_RS23800 () | 5184324..5184986 | + | 663 | WP_011349189.1 | ABC transporter substrate-binding protein | - |
| AC801_RS23805 () | 5184976..5185266 | + | 291 | WP_039569023.1 | STAS domain-containing protein | - |
| AC801_RS23810 () | 5185277..5186332 | + | 1056 | WP_039569025.1 | VacJ family lipoprotein | - |
| AC801_RS23825 () | 5187886..5188431 | - | 546 | WP_039571216.1 | glutathione peroxidase | - |
| AC801_RS23830 () | 5188585..5188962 | - | 378 | WP_039571219.1 | hypothetical protein | - |
| AC801_RS23835 () | 5189178..5190710 | - | 1533 | WP_180301640.1 | DNA recombination protein RmuC | - |
| AC801_RS23840 () | 5190939..5191946 | - | 1008 | WP_039571231.1 | zinc-binding alcohol dehydrogenase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|