MGE detailed information
MGE type: IS/Tn MGE length: 1356 bp
Accession: NZ_CP011972 Location: 206672..208027 Organism: Pseudomonas syringae pv. actinidiae ICMP 18884 Replicon: chromosome
Accession: NZ_CP011972 Location: 206672..208027 Organism: Pseudomonas syringae pv. actinidiae ICMP 18884 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IYO_RS29900 () | 202484..202762 | + | 279 | WP_003377943.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| IYO_RS00955 () | 202772..203077 | + | 306 | WP_005739893.1 | HigA family addiction module antidote protein | Antitoxin Detail |
| IYO_RS00960 () | 203111..203392 | - | 282 | WP_017682769.1 | accessory factor UbiK family protein | - |
| IYO_RS00965 () | 203812..204150 | + | 339 | WP_002555808.1 | P-II family nitrogen regulator | - |
| IYO_RS00970 () | 204185..205522 | + | 1338 | WP_003377937.1 | ammonium transporter | - |
| IYO_RS00975 () | 205510..205773 | - | 264 | WP_017699472.1 | hypothetical protein | - |
| IYO_RS00980 () | 205765..206190 | + | 426 | WP_003377936.1 | secondary thiamine-phosphate synthase enzyme YjbQ | - |
| IYO_RS00985 () | 206289..206621 | + | 333 | WP_003377934.1 | hypothetical protein | - |
| IYO_RS00990 () | 206672..208009 | - | 1338 | WP_032685517.1 | IS4 family transposase ISPsy33 | Transposase |
| IYO_RS00995 () | 208138..208830 | - | 693 | WP_003377932.1 | HAD family hydrolase | - |
| IYO_RS01000 () | 208823..209722 | - | 900 | WP_017684895.1 | tyrosine recombinase XerC | - |
| IYO_RS01005 () | 209725..210459 | - | 735 | WP_003377929.1 | DUF484 family protein | - |
| IYO_RS01010 () | 210473..211303 | - | 831 | WP_017684894.1 | diaminopimelate epimerase | - |
| IYO_RS01015 () | 211308..212555 | - | 1248 | WP_017684893.1 | diaminopimelate decarboxylase | - |
| IYO_RS01020 () | 212565..212711 | - | 147 | WP_003377923.1 | lipoprotein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|