MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 34979 bp
Accession: NZ_CP011521 Location: 1..34979 Organism: Pandoraea oxalativorans strain DSM 23570 Replicon: plasmid pPO70-4
Accession: NZ_CP011521 Location: 1..34979 Organism: Pandoraea oxalativorans strain DSM 23570 Replicon: plasmid pPO70-4
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MB84_RS30450 () | 28..219 | - | 192 | WP_157123170.1 | hypothetical protein | - |
| MB84_RS28485 () | 251..1300 | - | 1050 | WP_052654834.1 | type IV secretion system protein | - |
| MB84_RS28490 () | 1311..1577 | - | 267 | WP_052654835.1 | EexN family lipoprotein | - |
| MB84_RS28495 () | 1590..2297 | - | 708 | WP_052654836.1 | hypothetical protein | VF |
| MB84_RS28500 () | 2315..4993 | - | 2679 | WP_052654837.1 | Type IV secretion system protein virB4 | VF |
| MB84_RS28505 () | 4995..5327 | - | 333 | WP_052654838.1 | Type IV secretion system protein virB3 | VF |
| MB84_RS28510 () | 5327..5602 | - | 276 | WP_084010184.1 | TrbC/VirB2 family protein | - |
| MB84_RS28515 () | 5611..5916 | - | 306 | WP_052654840.1 | hypothetical protein | - |
| MB84_RS28520 () | 5913..6698 | - | 786 | WP_169835103.1 | Type IV secretion system protein virB1 | VF |
| MB84_RS29705 () | 6734..7132 | + | 399 | WP_084010186.1 | H-NS histone family protein | - |
| MB84_RS28525 () | 7136..7510 | + | 375 | WP_065225924.1 | hypothetical protein | - |
| MB84_RS28530 () | 7515..7832 | + | 318 | WP_065225925.1 | hypothetical protein | - |
| MB84_RS28535 () | 7959..8456 | - | 498 | WP_052654843.1 | single-stranded DNA-binding protein | - |
| MB84_RS28545 () | 9222..9575 | - | 354 | WP_052654853.1 | hypothetical protein | - |
| MB84_RS28550 () | 9780..10985 | - | 1206 | WP_052654845.1 | replication initiation protein | - |
| MB84_RS28555 () | 11229..11540 | - | 312 | WP_052654846.1 | hypothetical protein | - |
| MB84_RS28560 () | 11687..11998 | - | 312 | WP_052654847.1 | hypothetical protein | - |
| MB84_RS28565 () | 11995..12621 | - | 627 | WP_052654848.1 | Chromosome-partitioning ATPase Soj | VF |
| MB84_RS28570 () | 13027..13761 | + | 735 | WP_052654849.1 | IS6 family transposase ISApr5 | Transposase |
| MB84_RS28575 () | 13877..14149 | + | 273 | WP_052654854.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| MB84_RS28580 () | 14146..14550 | + | 405 | WP_052654850.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| MB84_RS28585 () | 14620..15354 | + | 735 | WP_052654851.1 | IS6 family transposase ISApr5 | Transposase |
| MB84_RS28590 () | 15717..16772 | - | 1056 | WP_052654852.1 | hypothetical protein | - |
| MB84_RS30675 () | 17158..17400 | - | 243 | Protein_24 | IS6 family transposase | - |
| MB84_RS28595 () | 17443..17775 | + | 333 | Protein_25 | IS6 family transposase ISRsp9 | Transposase |
| MB84_RS28600 () | 17815..19065 | - | 1251 | WP_046290551.1 | IS256 family transposase IS1090 | Transposase |
| MB84_RS28605 () | 19122..19622 | + | 501 | Protein_27 | IS3 family transposase ISBmu11 | Transposase |
| MB84_RS28610 () | 19805..20527 | - | 723 | WP_052654821.1 | hypothetical protein | - |
| MB84_RS28615 () | 21126..22391 | + | 1266 | WP_046290067.1 | IS256 family transposase IS1490 | Transposase |
| MB84_RS28625 () | 23727..25445 | + | 1719 | WP_052654823.1 | type IV secretory system conjugative DNA transfer family protein | - |
| MB84_RS30455 () | 25486..26694 | - | 1209 | WP_157123172.1 | hypothetical protein | - |
| MB84_RS28635 () | 27176..27793 | - | 618 | WP_052654825.1 | Tn3 family transposase TnpR_ISAzs17 | Transposase |
| MB84_RS28640 () | 27793..28128 | - | 336 | WP_052654826.1 | hypothetical protein | - |
| MB84_RS28645 () | 28570..30228 | + | 1659 | WP_052654827.1 | hypothetical protein | - |
| MB84_RS28650 () | 30464..30730 | - | 267 | WP_052654828.1 | DUF2274 domain-containing protein | - |
| MB84_RS28655 () | 30745..31227 | - | 483 | WP_052654829.1 | hypothetical protein | - |
| MB84_RS28660 () | 31237..32265 | - | 1029 | WP_052654830.1 | Type IV secretion system protein VirB11 | VF |
| MB84_RS28665 () | 32262..33413 | - | 1152 | WP_052654831.1 | type IV secretion system protein VirB10 | - |
| MB84_RS28670 () | 33410..34297 | - | 888 | WP_052654832.1 | Type IV secretion system protein virB9 | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|