MGE detailed information
MGE type: Genomic_island MGE length: 11127 bp
Accession: NZ_CP011427 Location: 1398208..1409334 Organism: Pantoea vagans strain ND02 Replicon: chromosome
Accession: NZ_CP011427 Location: 1398208..1409334 Organism: Pantoea vagans strain ND02 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LK04_RS06425 () | 1394457..1395251 | - | 795 | WP_039335113.1 | PhnD/SsuA/transferrin family substrate-binding protein | - |
| LK04_RS06430 () | 1395139..1396188 | - | 1050 | WP_039335133.1 | fatty acid desaturase | - |
| LK04_RS06435 () | 1396405..1397427 | + | 1023 | WP_039335111.1 | LLM class flavin-dependent oxidoreductase | - |
| LK04_RS06440 () | 1397456..1398055 | - | 600 | WP_039335109.1 | glutathione S-transferase family protein | - |
| LK04_RS06445 () | 1398208..1399101 | + | 894 | WP_039335107.1 | LysR family transcriptional regulator | - |
| LK04_RS06450 () | 1399179..1399367 | + | 189 | WP_039335104.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| LK04_RS06455 () | 1399385..1399795 | + | 411 | WP_039335103.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| LK04_RS06460 () | 1399884..1400711 | - | 828 | WP_039335100.1 | hypothetical protein | VF |
| LK04_RS06465 () | 1400856..1402238 | - | 1383 | WP_039329060.1 | FAD-binding protein | - |
| LK04_RS06470 () | 1402313..1402954 | - | 642 | WP_039329059.1 | TetR family transcriptional regulator | - |
| LK04_RS06475 () | 1403168..1403995 | + | 828 | WP_039329057.1 | D-methionine-binding lipoprotein MetQ | VF |
| LK04_RS06480 () | 1404005..1405132 | + | 1128 | WP_081998071.1 | Methionine import ATP-binding protein MetN | VF |
| LK04_RS06485 () | 1405113..1405769 | + | 657 | WP_039329056.1 | ABC transporter permease | - |
| LK04_RS06490 () | 1405992..1407191 | + | 1200 | WP_039329055.1 | M20 family metallopeptidase | - |
| LK04_RS06495 () | 1407203..1408507 | + | 1305 | WP_039329054.1 | NtaA/DmoA family FMN-dependent monooxygenase | - |
| LK04_RS06500 () | 1408674..1409027 | + | 354 | WP_039329053.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LK04_RS06505 () | 1409032..1409334 | + | 303 | WP_039329052.1 | XRE family transcriptional regulator | Antitoxin Detail |
| LK04_RS06515 () | 1410056..1410979 | + | 924 | WP_039329051.1 | sugar ABC transporter substrate-binding protein | - |
| LK04_RS06520 () | 1411012..1412496 | + | 1485 | WP_039329050.1 | sugar ABC transporter ATP-binding protein | - |
| LK04_RS06525 () | 1412511..1413542 | + | 1032 | WP_039329049.1 | ABC transporter permease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|