MGE detailed information
MGE type: Genomic_island MGE length: 72548 bp
Accession: NZ_CP011317 Location: 1261921..1334468 Organism: Pseudomonas aeruginosa strain Carb01 63 Replicon: chromosome
Accession: NZ_CP011317 Location: 1261921..1334468 Organism: Pseudomonas aeruginosa strain Carb01 63 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| YQ19_RS06165 () | 1257238..1257807 | + | 570 | WP_003114324.1 | pseudouridine synthase | - |
| YQ19_RS06170 () | 1257841..1258233 | - | 393 | WP_003093127.1 | globin | - |
| YQ19_RS06175 () | 1258334..1258543 | - | 210 | WP_003093125.1 | DUF2788 domain-containing protein | - |
| YQ19_RS06180 () | 1258745..1259254 | - | 510 | WP_003119210.1 | Lrp/AsnC family transcriptional regulator | - |
| YQ19_RS06185 () | 1259702..1260385 | + | 684 | WP_003118264.1 | hypothetical protein | - |
| YQ19_RS06190 () | 1260378..1261274 | - | 897 | WP_003093118.1 | CDF family cation-efflux transporter FieF | - |
| YQ19_RS06195 () | 1261363..1261779 | - | 417 | WP_003093116.1 | hypothetical protein | - |
| YQ19_RS06200 () | 1261921..1262376 | + | 456 | WP_023128597.1 | DEAD/DEAH box helicase | - |
| YQ19_RS06205 () | 1262430..1264952 | + | 2523 | WP_015649536.1 | ATP-dependent helicase HrpB | - |
| YQ19_RS06210 () | 1265274..1265726 | - | 453 | WP_015649535.1 | hypothetical protein | - |
| YQ19_RS06215 () | 1265989..1266675 | - | 687 | WP_015649534.1 | helix-turn-helix domain-containing protein | - |
| YQ19_RS06220 () | 1266970..1267626 | + | 657 | WP_015649533.1 | hypothetical protein | - |
| YQ19_RS06225 () | 1267619..1268485 | + | 867 | WP_015649532.1 | ImmA/IrrE family metallo-endopeptidase | - |
| YQ19_RS06230 () | 1268478..1269554 | + | 1077 | WP_015649531.1 | hypothetical protein | - |
| YQ19_RS35805 () | 1269513..1270100 | - | 588 | WP_071534663.1 | sce7726 family protein | - |
| YQ19_RS06235 () | 1270294..1270506 | + | 213 | WP_023128602.1 | hypothetical protein | - |
| YQ19_RS06240 () | 1270597..1271052 | - | 456 | WP_025297646.1 | helix-turn-helix domain-containing protein | - |
| YQ19_RS06245 () | 1271217..1271612 | + | 396 | WP_023128603.1 | hypothetical protein | - |
| YQ19_RS06250 () | 1271655..1272125 | + | 471 | WP_023128604.1 | hypothetical protein | - |
| YQ19_RS06255 () | 1272128..1272511 | + | 384 | WP_025297645.1 | hypothetical protein | - |
| YQ19_RS06260 () | 1272593..1273171 | + | 579 | WP_025297644.1 | hypothetical protein | - |
| YQ19_RS06265 () | 1273502..1273866 | + | 365 | Protein_1264 | DNA binding protein | - |
| YQ19_RS06270 () | 1274090..1274284 | - | 195 | WP_023128607.1 | OprD family outer membrane porin | - |
| YQ19_RS06275 () | 1274259..1275052 | + | 794 | Protein_1266 | transporter substrate-binding domain-containing protein | - |
| YQ19_RS35810 () | 1275191..1275484 | - | 294 | WP_158025315.1 | type II toxin-antitoxin system RnlB family antitoxin | Antitoxin Detail |
| YQ19_RS06280 () | 1275539..1276612 | - | 1074 | WP_025297643.1 | type II toxin-antitoxin system RnlA family toxin | Toxin Detail |
| YQ19_RS06285 () | 1277327..1277581 | + | 255 | WP_023128610.1 | hypothetical protein | - |
| YQ19_RS06290 () | 1277879..1278175 | + | 297 | WP_023128612.1 | hypothetical protein | - |
| YQ19_RS06295 () | 1278228..1279811 | - | 1584 | WP_025297642.1 | hypothetical protein | - |
| YQ19_RS06300 () | 1280091..1280519 | + | 429 | WP_025297641.1 | S24 family peptidase | - |
| YQ19_RS06305 () | 1280903..1282129 | + | 1227 | WP_025297640.1 | CmlA/FloR family chloramphenicol efflux MFS transporter | - |
| YQ19_RS06310 () | 1282308..1282718 | + | 411 | WP_079379916.1 | hypothetical protein | VF |
| YQ19_RS35435 () | 1282874..1283644 | + | 771 | WP_050397054.1 | DUF4111 domain-containing protein | - |
| YQ19_RS06315 () | 1283641..1284444 | + | 804 | WP_029771308.1 | APH(3'') family aminoglycoside O-phosphotransferase | - |
| YQ19_RS35440 () | 1284476..1285768 | + | 1293 | WP_063879050.1 | hypothetical protein ; Integrase | Integrase |
| YQ19_RS37150 () | 1285755..1287512 | + | 1758 | WP_054889621.1 | hypothetical protein | - |
| YQ19_RS06325 () | 1287509..1289518 | + | 2010 | WP_033895284.1 | hypothetical protein ; Integrase | Integrase |
| YQ19_RS06330 () | 1289490..1289915 | + | 426 | WP_025297803.1 | hypothetical protein | - |
| YQ19_RS37155 () | 1290342..1290542 | + | 201 | WP_108703329.1 | hypothetical protein | - |
| YQ19_RS06335 () | 1290680..1290970 | + | 291 | Protein_1282 | DNA polymerase V subunit UmuC | - |
| YQ19_RS06340 () | 1291047..1292336 | + | 1290 | WP_025297805.1 | hypothetical protein ; Integrase | Integrase |
| YQ19_RS06345 () | 1292329..1294059 | + | 1731 | WP_025297806.1 | hypothetical protein ; Integrase | Integrase |
| YQ19_RS37500 () | 1294056..1296095 | + | 2040 | WP_025297807.1 | hypothetical protein | - |
| YQ19_RS35820 () | 1296118..1296540 | + | 423 | WP_079379915.1 | hypothetical protein | - |
| YQ19_RS06355 () | 1296608..1299298 | - | 2691 | WP_025297808.1 | AAA family ATPase | - |
| YQ19_RS06360 () | 1300027..1301514 | + | 1488 | WP_003123389.1 | SulP family inorganic anion transporter | - |
| YQ19_RS06365 () | 1301529..1302380 | + | 852 | WP_025297809.1 | universal stress protein | - |
| YQ19_RS06370 () | 1302669..1303874 | + | 1206 | WP_025297810.1 | chromate efflux transporter | - |
| YQ19_RS37160 () | 1303885..1303995 | + | 111 | Protein_1291 | PadR family transcriptional regulator | - |
| YQ19_RS06380 () | 1304002..1304619 | + | 618 | WP_025297811.1 | class I SAM-dependent methyltransferase | - |
| YQ19_RS06385 () | 1304951..1305918 | + | 968 | Protein_1293 | Y-family DNA polymerase | - |
| YQ19_RS06390 () | 1306072..1306365 | + | 294 | WP_023128615.1 | hypothetical protein | - |
| YQ19_RS06405 () | 1307896..1310043 | + | 2148 | WP_086230873.1 | ATP-dependent helicase HrpB | - |
| YQ19_RS06410 () | 1310099..1311565 | + | 1467 | WP_003132541.1 | hypothetical protein ; Integrase | Integrase |
| YQ19_RS35825 () | 1311562..1313490 | + | 1929 | WP_003132543.1 | hypothetical protein | - |
| YQ19_RS06415 () | 1313487..1315535 | + | 2049 | WP_003132545.1 | hypothetical protein | - |
| YQ19_RS35830 () | 1315538..1315966 | + | 429 | WP_010562495.1 | hypothetical protein | - |
| YQ19_RS06420 () | 1316099..1316320 | - | 222 | WP_010562496.1 | helix-turn-helix domain-containing protein | - |
| YQ19_RS06425 () | 1316425..1317003 | + | 579 | WP_003127304.1 | hypothetical protein | - |
| YQ19_RS06430 () | 1317000..1318400 | + | 1401 | WP_003127305.1 | DEAD/DEAH box helicase family protein | - |
| YQ19_RS06435 () | 1318491..1318793 | + | 303 | WP_003298444.1 | hypothetical protein | - |
| YQ19_RS35835 () | 1318832..1319245 | + | 414 | Protein_1305 | hypothetical protein | - |
| YQ19_RS06440 () | 1319634..1320026 | + | 393 | WP_079280456.1 | IS66 family transposase ISSal1 | Transposase |
| YQ19_RS06445 () | 1320023..1320358 | + | 336 | WP_023105888.1 | IS66 family transposase ISPpu30 | Transposase |
| YQ19_RS06450 () | 1320422..1321933 | + | 1512 | WP_023105887.1 | IS66 family transposase ISPsy43 | Transposase |
| YQ19_RS06455 () | 1322030..1322365 | + | 336 | WP_010562499.1 | IS66 family transposase ISSal1 | Transposase |
| YQ19_RS06460 () | 1322463..1322768 | - | 306 | Protein_1310 | IS5 family transposase ISPst7 | Transposase |
| YQ19_RS06465 () | 1322876..1323745 | - | 870 | WP_003127731.1 | hypothetical protein | VF |
| YQ19_RS06470 () | 1323739..1324749 | - | 1011 | WP_003127732.1 | phosphonate dehydrogenase PtxD | - |
| YQ19_RS06475 () | 1324758..1325585 | - | 828 | WP_010466252.1 | phosphonate ABC transporter, permease protein PhnE | - |
| YQ19_RS06480 () | 1325594..1326457 | - | 864 | WP_010562501.1 | phosphate/phosphite/phosphonate ABC transporter substrate-binding protein | - |
| YQ19_RS06485 () | 1326454..1327281 | - | 828 | WP_003118432.1 | hypothetical protein | VF |
| YQ19_RS06490 () | 1327624..1328134 | + | 511 | Protein_1316 | IS5 family transposase ISPre2 | Transposase |
| YQ19_RS06495 () | 1328654..1329922 | + | 1269 | WP_010562502.1 | group II intron reverse transcriptase/maturase | - |
| YQ19_RS37505 () | 1330654..1330827 | - | 174 | WP_016712140.1 | hypothetical protein | - |
| YQ19_RS06500 () | 1331917..1333461 | - | 1545 | WP_003127475.1 | transcriptional regulator | - |
| YQ19_RS06505 () | 1333542..1334468 | - | 927 | WP_010562503.1 | nucleotide-binding protein | - |
| YQ19_RS06510 () | 1334906..1335313 | - | 408 | WP_003093113.1 | hypothetical protein | - |
| YQ19_RS06515 () | 1335337..1336071 | - | 735 | WP_003159347.1 | hypothetical protein | - |
| YQ19_RS06520 () | 1336161..1337300 | - | 1140 | WP_003106827.1 | endonuclease/exonuclease/phosphatase family protein | - |
| YQ19_RS06525 () | 1337362..1338198 | + | 837 | WP_003106828.1 | SDR family oxidoreductase | - |
| YQ19_RS06530 () | 1338205..1338639 | - | 435 | WP_003106829.1 | VOC family protein | - |
| YQ19_RS06535 () | 1338706..1339362 | - | 657 | WP_003106831.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|