MGE detailed information
MGE type: Genomic_island MGE length: 24964 bp
Accession: NZ_CP010812 Location: 1585568..1610531 Organism: Vibrio cholerae strain 10432-62 Replicon: chromosome
Accession: NZ_CP010812 Location: 1585568..1610531 Organism: Vibrio cholerae strain 10432-62 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| VAB027_RS07445 () | 1581977..1585249 | + | 3273 | WP_046126472.1 | type I restriction endonuclease subunit R | - |
| VAB027_RS07450 () | 1585568..1586035 | - | 468 | WP_046127336.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| VAB027_RS07455 () | 1586032..1587393 | - | 1362 | WP_046126473.1 | type II toxin-antitoxin system HipA family toxin | Toxin Detail |
| VAB027_RS07465 () | 1588040..1588339 | + | 300 | WP_046127337.1 | helix-turn-helix transcriptional regulator | - |
| VAB027_RS07470 () | 1588448..1588696 | + | 249 | WP_046126474.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| VAB027_RS07475 () | 1588686..1588975 | + | 290 | Protein_1453 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| VAB027_RS07480 () | 1589067..1589267 | + | 201 | WP_046126475.1 | AlpA family transcriptional regulator | - |
| VAB027_RS07485 () | 1589296..1589592 | - | 297 | WP_144406906.1 | hypothetical protein | - |
| VAB027_RS07490 () | 1589720..1590406 | - | 687 | WP_046126477.1 | hypothetical protein | - |
| VAB027_RS07495 () | 1590859..1591517 | + | 659 | Protein_1457 | inovirus Gp2 family protein | - |
| VAB027_RS07500 () | 1591596..1592285 | - | 690 | WP_046126478.1 | hypothetical protein | - |
| VAB027_RS07505 () | 1592388..1592723 | - | 336 | WP_011150766.1 | hypothetical protein | - |
| VAB027_RS07510 () | 1592864..1593115 | - | 252 | WP_046126479.1 | hypothetical protein | - |
| VAB027_RS07515 () | 1593145..1593663 | + | 519 | WP_080341949.1 | ribonuclease HI | - |
| VAB027_RS07520 () | 1593920..1594363 | - | 444 | WP_046126481.1 | DUF2787 domain-containing protein | - |
| VAB027_RS07525 () | 1594412..1594840 | - | 429 | WP_080341950.1 | DUF2787 domain-containing protein | - |
| VAB027_RS07530 () | 1594837..1595309 | - | 473 | Protein_1464 | DNA repair protein RadC | - |
| VAB027_RS07535 () | 1595456..1595632 | + | 177 | WP_046126483.1 | AlpA family transcriptional regulator | - |
| VAB027_RS07540 () | 1596040..1598013 | - | 1974 | WP_046126484.1 | ATP-binding protein | - |
| VAB027_RS07545 () | 1598010..1599827 | - | 1818 | WP_046126485.1 | N-6 DNA methylase | - |
| VAB027_RS07550 () | 1599835..1602306 | - | 2472 | WP_046126486.1 | PglZ domain-containing protein | - |
| VAB027_RS07555 () | 1602303..1603814 | - | 1512 | WP_046126487.1 | restriction endonuclease subunit S | - |
| VAB027_RS07560 () | 1603818..1606856 | - | 3039 | WP_046126488.1 | hypothetical protein | - |
| VAB027_RS07565 () | 1606922..1607992 | - | 1071 | WP_046126489.1 | hypothetical protein | - |
| VAB027_RS07570 () | 1607994..1608533 | - | 540 | WP_046126490.1 | ATP-binding protein | - |
| VAB027_RS07575 () | 1608520..1609278 | - | 759 | WP_142629410.1 | hypothetical protein | - |
| VAB027_RS07580 () | 1609298..1609501 | - | 204 | WP_046126492.1 | helix-turn-helix domain-containing protein | - |
| VAB027_RS07585 () | 1610079..1610531 | + | 453 | Protein_1475 | IS3 family transposase | - |
| VAB027_RS07590 () | 1610621..1611868 | - | 1248 | WP_046126493.1 | tyrosine-type recombinase/integrase | - |
| VAB027_RS07595 () | 1612469..1612954 | - | 486 | WP_000162689.1 | SsrA-binding protein SmpB | - |
| VAB027_RS07600 () | 1613138..1613572 | + | 435 | WP_000815880.1 | type II toxin-antitoxin system RatA family toxin | - |
| VAB027_RS07605 () | 1613575..1613880 | + | 306 | WP_001918351.1 | RnfH family protein | - |
| VAB027_RS07610 () | 1613956..1614315 | - | 360 | WP_001160907.1 | outer membrane protein assembly factor BamE | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|