MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 183844 bp
Accession: NZ_CP010737 Location: 1..183844 Organism: Phaeobacter inhibens strain P72 Replicon: plasmid pP72_b
Accession: NZ_CP010737 Location: 1..183844 Organism: Phaeobacter inhibens strain P72 Replicon: plasmid pP72_b
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PhaeoP72_RS19400 () | 1..1176 | + | 1176 | WP_027246612.1 | Cell division protein PomZ | VF |
| PhaeoP72_RS19405 () | 1176..2153 | + | 978 | WP_102859848.1 | plasmid partitioning protein RepB | - |
| PhaeoP72_RS19410 () | 2338..3492 | + | 1155 | WP_102859849.1 | replication initiator RepC | - |
| PhaeoP72_RS19415 () | 3640..4524 | - | 885 | WP_102859850.1 | alpha/beta fold hydrolase | - |
| PhaeoP72_RS19420 () | 4610..5167 | + | 558 | WP_102859851.1 | putative HTH-type transcriptional regulator YxaF | VF |
| PhaeoP72_RS19425 () | 5258..5557 | - | 300 | WP_102859852.1 | CcdB family protein | Toxin Detail |
| PhaeoP72_RS19430 () | 5557..5793 | - | 237 | WP_027246608.1 | type II toxin-antitoxin system CcdA family antitoxin | Antitoxin Detail |
| PhaeoP72_RS19435 () | 6189..7103 | - | 915 | WP_102859853.1 | FAD:protein FMN transferase | - |
| PhaeoP72_RS19440 () | 7107..7595 | - | 489 | WP_158525079.1 | nitrous oxide reductase accessory protein NosL | - |
| PhaeoP72_RS19445 () | 7670..8494 | - | 825 | WP_102859855.1 | ABC transporter permease | - |
| PhaeoP72_RS19450 () | 8491..9387 | - | 897 | WP_102859981.1 | ABC transporter ATP-binding protein | - |
| PhaeoP72_RS19455 () | 9353..10684 | - | 1332 | WP_102859856.1 | nitrous oxide reductase family maturation protein NosD | - |
| PhaeoP72_RS19460 () | 10688..12625 | - | 1938 | WP_102859857.1 | TAT-dependent nitrous-oxide reductase | - |
| PhaeoP72_RS19465 () | 12638..14830 | - | 2193 | WP_102859858.1 | regulatory protein NosR | - |
| PhaeoP72_RS19470 () | 14827..15285 | - | 459 | WP_123618822.1 | hypothetical protein | - |
| PhaeoP72_RS19475 () | 15554..15748 | - | 195 | WP_102859860.1 | Crp/Fnr family transcriptional regulator | - |
| PhaeoP72_RS19480 () | 15842..16858 | + | 1017 | WP_199536325.1 | hypothetical protein | - |
| PhaeoP72_RS19485 () | 16985..17696 | - | 712 | Protein_17 | IS5 family transposase | - |
| PhaeoP72_RS19490 () | 17969..18454 | + | 486 | WP_102859862.1 | hypothetical protein | - |
| PhaeoP72_RS19495 () | 18495..19433 | + | 939 | WP_102859863.1 | DUF1738 domain-containing protein | - |
| PhaeoP72_RS19500 () | 19503..19892 | + | 390 | WP_102859864.1 | DUF3768 domain-containing protein | - |
| PhaeoP72_RS19505 () | 20051..22033 | + | 1983 | WP_102859865.1 | ParB/RepB/Spo0J family partition protein | - |
| PhaeoP72_RS19510 () | 22108..22701 | + | 594 | WP_102859866.1 | regulator | - |
| PhaeoP72_RS19515 () | 22701..23354 | + | 654 | WP_102859867.1 | hypothetical protein | - |
| PhaeoP72_RS19520 () | 23481..23807 | + | 327 | WP_102859868.1 | type II toxin-antitoxin system PrlF family antitoxin | - |
| PhaeoP72_RS19525 () | 23804..24322 | + | 519 | WP_102859869.1 | type II toxin-antitoxin system YhaV family toxin | - |
| PhaeoP72_RS19530 () | 24470..24622 | + | 153 | WP_040618656.1 | hypothetical protein | - |
| PhaeoP72_RS19535 () | 24725..28987 | + | 4263 | WP_102859870.1 | strawberry notch family protein | - |
| PhaeoP72_RS19540 () | 29109..29495 | + | 387 | WP_102859871.1 | hypothetical protein | - |
| PhaeoP72_RS19545 () | 29497..29958 | + | 462 | WP_102859872.1 | hypothetical protein | - |
| PhaeoP72_RS19550 () | 30059..30361 | + | 303 | Protein_30 | hypothetical protein | - |
| PhaeoP72_RS19555 () | 30486..31214 | + | 729 | WP_102859873.1 | DUF736 family protein | - |
| PhaeoP72_RS19560 () | 31499..31906 | + | 408 | WP_102859982.1 | hypothetical protein | - |
| PhaeoP72_RS19565 () | 32055..32636 | + | 582 | WP_102859983.1 | rhomboid family intramembrane serine protease | - |
| PhaeoP72_RS21405 () | 32862..33038 | + | 177 | WP_158525074.1 | hypothetical protein | - |
| PhaeoP72_RS19570 () | 33035..35488 | + | 2454 | WP_102859874.1 | AAA family ATPase | - |
| PhaeoP72_RS19575 () | 36208..37137 | + | 930 | WP_102859875.1 | DUF2493 domain-containing protein | - |
| PhaeoP72_RS19580 () | 37673..37879 | + | 207 | WP_007120662.1 | hypothetical protein | - |
| PhaeoP72_RS19585 () | 38266..38859 | + | 594 | WP_102859876.1 | helix-turn-helix domain-containing protein | - |
| PhaeoP72_RS19590 () | 38846..41179 | + | 2334 | WP_102859877.1 | T-DNA border endonuclease VirD2 | Relaxase |
| PhaeoP72_RS19595 () | 41188..43182 | + | 1995 | WP_102859878.1 | Protein VirD4 | VF |
| PhaeoP72_RS19600 () | 43310..47425 | - | 4116 | WP_123618823.1 | hypothetical protein | - |
| PhaeoP72_RS19605 () | 47568..48566 | + | 999 | WP_102859880.1 | hypothetical protein | - |
| PhaeoP72_RS19610 () | 48940..49959 | - | 1020 | WP_102859881.1 | IS110 family transposase ISMlo3 | Transposase |
| PhaeoP72_RS19615 () | 50060..50611 | - | 552 | WP_102859882.1 | TetR/AcrR family transcriptional regulator | - |
| PhaeoP72_RS19620 () | 50708..51607 | + | 900 | WP_102859883.1 | AraC family transcriptional regulator | - |
| PhaeoP72_RS19625 () | 51716..52006 | + | 291 | WP_102859884.1 | antibiotic biosynthesis monooxygenase | - |
| PhaeoP72_RS19635 () | 52340..52798 | + | 459 | WP_102859886.1 | SRPBCC family protein | - |
| PhaeoP72_RS19640 () | 52795..53241 | + | 447 | WP_102859887.1 | DUF3995 domain-containing protein | - |
| PhaeoP72_RS19645 () | 53243..53617 | + | 375 | WP_102859888.1 | hypothetical protein | - |
| PhaeoP72_RS19650 () | 53617..54006 | + | 390 | WP_102859889.1 | hypothetical protein | - |
| PhaeoP72_RS19655 () | 54003..54500 | + | 498 | WP_102859890.1 | DUF2867 domain-containing protein | - |
| PhaeoP72_RS19660 () | 54491..55159 | + | 669 | WP_102859891.1 | LysE family translocator | - |
| PhaeoP72_RS19665 () | 55156..56226 | - | 1071 | WP_102859892.1 | alpha/beta hydrolase fold domain-containing protein | - |
| PhaeoP72_RS19670 () | 56324..57160 | + | 837 | WP_102859893.1 | helix-turn-helix domain-containing protein | - |
| PhaeoP72_RS19675 () | 57916..58779 | - | 864 | WP_102856140.1 | LysR family transcriptional regulator | - |
| PhaeoP72_RS19680 () | 58890..60047 | + | 1158 | WP_102859894.1 | Maltose/maltodextrin import ATP-binding protein MalK | VF |
| PhaeoP72_RS19685 () | 60049..61032 | + | 984 | WP_102856085.1 | sugar ABC transporter permease | - |
| PhaeoP72_RS19690 () | 61029..61991 | + | 963 | WP_102856084.1 | carbohydrate ABC transporter permease | - |
| PhaeoP72_RS19695 () | 62102..63349 | + | 1248 | WP_102859895.1 | ABC transporter substrate-binding protein | - |
| PhaeoP72_RS19700 () | 63414..64244 | + | 831 | WP_102859984.1 | metallophosphoesterase | - |
| PhaeoP72_RS19705 () | 64752..65990 | + | 1239 | WP_102859896.1 | hypothetical protein | - |
| PhaeoP72_RS19710 () | 66349..67425 | - | 1077 | WP_102859897.1 | hypothetical protein | VF |
| PhaeoP72_RS19715 () | 67438..67851 | - | 414 | WP_058243507.1 | hypothetical protein | - |
| PhaeoP72_RS19720 () | 67848..68042 | - | 195 | WP_102859898.1 | hypothetical protein | - |
| PhaeoP72_RS19725 () | 68039..69025 | - | 987 | WP_102859899.1 | Type IV secretion system protein VirB11 | VF |
| PhaeoP72_RS19730 () | 69030..70409 | - | 1380 | WP_102859900.1 | Type IV secretion system protein PtlG | VF |
| PhaeoP72_RS19735 () | 70406..71101 | - | 696 | WP_102859901.1 | Protein virB9 | VF |
| PhaeoP72_RS19740 () | 71103..71759 | - | 657 | WP_102859902.1 | type IV secretion system protein | - |
| PhaeoP72_RS19745 () | 71774..72583 | - | 810 | WP_102859903.1 | conjugal transfer protein TraF | - |
| PhaeoP72_RS19750 () | 72583..73737 | - | 1155 | WP_199536326.1 | lytic transglycosylase domain-containing protein | - |
| PhaeoP72_RS21525 () | 73727..73894 | - | 168 | WP_199536327.1 | hypothetical protein | - |
| PhaeoP72_RS19755 () | 73891..76266 | - | 2376 | WP_102859904.1 | type IV secretion system DNA-binding domain-containing protein | - |
| PhaeoP72_RS19760 () | 76256..76534 | - | 279 | WP_102855963.1 | VirB3 family type IV secretion system protein | - |
| PhaeoP72_RS19765 () | 76527..76820 | - | 294 | WP_102859905.1 | Type IV secretion system protein virB2 | VF |
| PhaeoP72_RS19770 () | 76817..77431 | - | 615 | WP_102859906.1 | lytic transglycosylase domain-containing protein | - |
| PhaeoP72_RS19775 () | 77475..77828 | - | 354 | WP_012187165.1 | hypothetical protein | - |
| PhaeoP72_RS19780 () | 78032..78292 | + | 261 | WP_102859907.1 | hypothetical protein | - |
| PhaeoP72_RS19785 () | 78417..78674 | + | 258 | WP_102855967.1 | helix-turn-helix domain-containing protein | - |
| PhaeoP72_RS19790 () | 78839..79066 | + | 228 | WP_102855968.1 | hypothetical protein | - |
| PhaeoP72_RS19795 () | 79508..79690 | + | 183 | WP_102891922.1 | hypothetical protein | - |
| PhaeoP72_RS19805 () | 80352..81074 | - | 723 | WP_102859910.1 | MipA/OmpV family protein | - |
| PhaeoP72_RS19810 () | 81221..82444 | + | 1224 | WP_102859911.1 | AraC family transcriptional regulator | - |
| PhaeoP72_RS19815 () | 82597..83628 | + | 1032 | WP_158525075.1 | alpha/beta fold hydrolase | - |
| PhaeoP72_RS19820 () | 83610..84017 | + | 408 | WP_123618826.1 | hypothetical protein | - |
| PhaeoP72_RS21270 () | 84604..85623 | + | 1020 | WP_123618827.1 | Hint domain-containing protein | - |
| PhaeoP72_RS19830 () | 86218..87123 | - | 906 | WP_102859913.1 | AEC family transporter | - |
| PhaeoP72_RS19835 () | 87120..88304 | - | 1185 | WP_102859914.1 | PLP-dependent aminotransferase family protein | - |
| PhaeoP72_RS19840 () | 88429..89226 | + | 798 | WP_158525076.1 | LysR family transcriptional regulator | - |
| PhaeoP72_RS19845 () | 89639..90259 | - | 621 | WP_102859916.1 | cysteine hydrolase | - |
| PhaeoP72_RS19850 () | 90256..90669 | - | 414 | WP_102859987.1 | MarR family winged helix-turn-helix transcriptional regulator | - |
| PhaeoP72_RS19860 () | 91286..93028 | - | 1743 | WP_102859918.1 | FAD/NAD(P)-binding domain-containing protein | - |
| PhaeoP72_RS19865 () | 93358..93871 | - | 514 | Protein_92 | IS3 family transposase ISRosp5 | Transposase |
| PhaeoP72_RS19870 () | 94052..95548 | + | 1497 | WP_102859919.1 | PAS domain-containing protein | - |
| PhaeoP72_RS19875 () | 95658..97013 | + | 1356 | WP_102859920.1 | type VI secretion protein ImpB | - |
| PhaeoP72_RS19880 () | 97754..98015 | - | 262 | Protein_95 | IS3 family transposase ISMex5 | Transposase |
| PhaeoP72_RS19885 () | 98296..99516 | + | 1221 | WP_102859921.1 | radical SAM protein | - |
| PhaeoP72_RS19890 () | 99516..101120 | + | 1605 | WP_102859922.1 | hypothetical protein | - |
| PhaeoP72_RS19895 () | 101117..102118 | + | 1002 | WP_102859923.1 | hypothetical protein | - |
| PhaeoP72_RS19900 () | 102194..102559 | + | 366 | WP_102859924.1 | inorganic diphosphatase | - |
| PhaeoP72_RS19905 () | 102572..103621 | + | 1050 | WP_102859925.1 | GNAT family N-acetyltransferase | - |
| PhaeoP72_RS19910 () | 103618..104973 | + | 1356 | WP_102859926.1 | hypothetical protein | - |
| PhaeoP72_RS19915 () | 104966..106999 | + | 2034 | WP_102859927.1 | alcohol dehydrogenase catalytic domain-containing protein | - |
| PhaeoP72_RS19920 () | 107010..107768 | + | 759 | WP_102859928.1 | class I SAM-dependent methyltransferase | - |
| PhaeoP72_RS19925 () | 107795..108427 | - | 633 | Protein_104 | IS21 family transposase | - |
| PhaeoP72_RS19940 () | 109811..110784 | - | 974 | Protein_105 | IS5 family transposase ISPko1 | Transposase |
| PhaeoP72_RS19945 () | 112060..112836 | - | 777 | WP_158525077.1 | TonB family protein | - |
| PhaeoP72_RS19950 () | 112902..113291 | - | 390 | WP_102859931.1 | biopolymer transporter ExbD | - |
| PhaeoP72_RS19955 () | 113291..113632 | - | 342 | WP_102859932.1 | biopolymer transporter ExbD | - |
| PhaeoP72_RS19960 () | 113664..114320 | - | 657 | WP_102859933.1 | MotA/TolQ/ExbB proton channel family protein | - |
| PhaeoP72_RS19965 () | 114317..114748 | - | 432 | WP_102859934.1 | hypothetical protein | - |
| PhaeoP72_RS19970 () | 114777..116843 | - | 2067 | WP_199536324.1 | TonB-dependent receptor | - |
| PhaeoP72_RS19975 () | 117077..118129 | + | 1053 | WP_102859935.1 | Hemin transport protein HemS | VF |
| PhaeoP72_RS19980 () | 118129..118998 | + | 870 | WP_102859936.1 | Hemin-binding periplasmic protein HmuT | VF |
| PhaeoP72_RS19985 () | 119000..120085 | + | 1086 | WP_102859937.1 | Hemin transport system permease protein HmuU | VF |
| PhaeoP72_RS19990 () | 120095..120874 | + | 780 | WP_102859938.1 | Hemin import ATP-binding protein HmuV | VF |
| PhaeoP72_RS20005 () | 122318..122698 | - | 381 | WP_102855861.1 | hypothetical protein | - |
| PhaeoP72_RS20010 () | 122721..123041 | - | 321 | WP_014875291.1 | monooxygenase | - |
| PhaeoP72_RS20015 () | 123180..124076 | + | 897 | WP_044040797.1 | HTH-type transcriptional regulator PgrR | VF |
| PhaeoP72_RS20020 () | 124705..125889 | - | 1185 | WP_102859939.1 | acetyl-CoA C-acyltransferase | - |
| PhaeoP72_RS20025 () | 125886..128006 | - | 2121 | WP_102859940.1 | enoyl-CoA hydratase/isomerase family protein | - |
| PhaeoP72_RS20030 () | 128018..128704 | - | 687 | WP_058277181.1 | hypothetical protein | - |
| PhaeoP72_RS20035 () | 128701..130305 | - | 1605 | WP_102859941.1 | fatty acid--CoA ligase | - |
| PhaeoP72_RS20040 () | 130543..131466 | + | 924 | WP_102859942.1 | LysR family transcriptional regulator | - |
| PhaeoP72_RS20045 () | 131500..132558 | - | 1059 | WP_102859943.1 | Glycine betaine transport ATP-binding protein OpuAA | VF |
| PhaeoP72_RS20050 () | 132571..133599 | - | 1029 | WP_073256169.1 | ABC transporter permease subunit | - |
| PhaeoP72_RS20055 () | 133667..134638 | - | 972 | WP_102859944.1 | ABC transporter substrate-binding protein | - |
| PhaeoP72_RS20065 () | 135293..136003 | - | 711 | WP_102859946.1 | hypothetical protein | - |
| PhaeoP72_RS20070 () | 136661..137449 | + | 789 | WP_102855971.1 | alpha/beta hydrolase | - |
| PhaeoP72_RS20075 () | 137457..138551 | + | 1095 | WP_102859947.1 | HAMP domain-containing histidine kinase | - |
| PhaeoP72_RS20080 () | 139854..141806 | + | 1953 | WP_102859948.1 | TonB-dependent receptor | - |
| PhaeoP72_RS20085 () | 141843..142646 | + | 804 | WP_102856006.1 | ABC transporter substrate-binding protein | - |
| PhaeoP72_RS20090 () | 142643..143626 | + | 984 | WP_102859949.1 | Iron-uptake system permease protein FeuC | VF |
| PhaeoP72_RS20095 () | 143623..144378 | + | 756 | WP_102859950.1 | Fe(3+) dicitrate transport ATP-binding protein FecE | VF |
| PhaeoP72_RS20100 () | 144378..145034 | + | 657 | WP_102859951.1 | adenosylcobinamide amidohydrolase | - |
| PhaeoP72_RS20105 () | 145027..146028 | + | 1002 | WP_102859952.1 | hypothetical protein | - |
| PhaeoP72_RS20110 () | 146040..146681 | + | 642 | WP_102859953.1 | MotA/TolQ/ExbB proton channel family protein | - |
| PhaeoP72_RS20115 () | 146678..147058 | + | 381 | WP_102855978.1 | biopolymer transporter ExbD | - |
| PhaeoP72_RS20120 () | 147064..147447 | + | 384 | WP_102859954.1 | biopolymer transporter ExbD | - |
| PhaeoP72_RS20125 () | 147444..148220 | + | 777 | WP_102855980.1 | TonB family protein | - |
| PhaeoP72_RS20130 () | 148327..148527 | + | 201 | WP_102855981.1 | isochorismatase family protein | - |
| PhaeoP72_RS20135 () | 148670..149182 | - | 513 | WP_102859955.1 | hypothetical protein | - |
| PhaeoP72_RS20140 () | 149663..150073 | + | 411 | Protein_142 | IS5 family transposase IS1248A | Transposase |
| PhaeoP72_RS20145 () | 150084..150698 | + | 615 | WP_102859956.1 | LysR family transcriptional regulator substrate-binding protein | - |
| PhaeoP72_RS20155 () | 152132..152803 | + | 672 | WP_102859958.1 | hypothetical protein | - |
| PhaeoP72_RS21275 () | 152872..153576 | + | 705 | WP_123618828.1 | hypothetical protein | - |
| PhaeoP72_RS20160 () | 153666..154061 | + | 396 | WP_061047611.1 | hypothetical protein | - |
| PhaeoP72_RS21410 () | 154130..154303 | + | 174 | WP_158525078.1 | hypothetical protein | - |
| PhaeoP72_RS20165 () | 154360..156402 | - | 2043 | WP_102859959.1 | hypothetical protein | - |
| PhaeoP72_RS21280 () | 156436..157581 | - | 1146 | WP_123618829.1 | phosphatase PAP2 family protein | - |
| PhaeoP72_RS20175 () | 157943..160006 | - | 2064 | WP_102859961.1 | Transcriptional activator CadC | VF |
| PhaeoP72_RS20180 () | 160512..160721 | + | 210 | WP_102859962.1 | hypothetical protein | - |
| PhaeoP72_RS20185 () | 161100..161666 | - | 567 | WP_102859963.1 | 3-hydroxyanthranilate 3,4-dioxygenase | - |
| PhaeoP72_RS20190 () | 161712..163142 | - | 1431 | WP_102859964.1 | NAD-dependent succinate-semialdehyde dehydrogenase | - |
| PhaeoP72_RS20195 () | 163259..163981 | - | 723 | WP_102859965.1 | FCD domain-containing protein | - |
| PhaeoP72_RS20200 () | 164090..165340 | + | 1251 | WP_102859966.1 | kynureninase | - |
| PhaeoP72_RS20205 () | 165531..166478 | + | 948 | WP_102859967.1 | tripartite tricarboxylate transporter substrate binding protein | - |
| PhaeoP72_RS20210 () | 166541..166963 | + | 423 | WP_102859968.1 | tripartite tricarboxylate transporter TctB family protein | - |
| PhaeoP72_RS20215 () | 166976..168481 | + | 1506 | WP_102859969.1 | tripartite tricarboxylate transporter permease | - |
| PhaeoP72_RS20220 () | 168634..169614 | + | 981 | WP_102859970.1 | TRAP transporter substrate-binding protein | - |
| PhaeoP72_RS20225 () | 169704..170249 | + | 546 | WP_102859971.1 | TRAP transporter small permease subunit | - |
| PhaeoP72_RS20230 () | 170246..171508 | + | 1263 | WP_096708205.1 | TRAP transporter large permease | - |
| PhaeoP72_RS20235 () | 171503..172450 | - | 948 | WP_102859972.1 | LysR family transcriptional regulator | - |
| PhaeoP72_RS20240 () | 172470..173264 | - | 795 | WP_102859973.1 | aspartate dehydrogenase | - |
| PhaeoP72_RS20245 () | 173453..174406 | + | 954 | WP_102859974.1 | dihydrodipicolinate synthase family protein | - |
| PhaeoP72_RS20250 () | 174546..175424 | + | 879 | WP_102859975.1 | DMT family transporter | - |
| PhaeoP72_RS20255 () | 175650..177398 | + | 1749 | WP_102859976.1 | hypothetical protein | - |
| PhaeoP72_RS20260 () | 177706..178019 | + | 314 | Protein_167 | alpha/beta fold hydrolase | - |
| PhaeoP72_RS20265 () | 178325..180196 | + | 1872 | WP_102859977.1 | D-alanyl-D-alanine carboxypeptidase | VF |
| PhaeoP72_RS20270 () | 180274..181479 | + | 1206 | WP_102859978.1 | helix-turn-helix transcriptional regulator | - |
| PhaeoP72_RS20275 () | 181582..182589 | - | 1008 | WP_102859979.1 | alpha/beta hydrolase | - |
| PhaeoP72_RS20280 () | 182642..183247 | + | 606 | WP_102859980.1 | GNAT family N-acetyltransferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|