MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 115493 bp
Accession: NZ_CP010602 Location: 1..115493 Organism: Phaeobacter inhibens strain P83 Replicon: plasmid pP83_c
Accession: NZ_CP010602 Location: 1..115493 Organism: Phaeobacter inhibens strain P83 Replicon: plasmid pP83_c
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PhaeoP83_RS20065 () | 1..1176 | + | 1176 | WP_027246612.1 | plasmid partitioning protein RepA | - |
| PhaeoP83_RS20070 () | 1176..2153 | + | 978 | WP_027246611.1 | plasmid partitioning protein RepB | - |
| PhaeoP83_RS20075 () | 2338..3492 | + | 1155 | WP_102875534.1 | replication initiator RepC | - |
| PhaeoP83_RS20080 () | 3640..4524 | - | 885 | WP_102875535.1 | alpha/beta fold hydrolase | - |
| PhaeoP83_RS20085 () | 4610..5167 | + | 558 | WP_102875536.1 | TetR/AcrR family transcriptional regulator | - |
| PhaeoP83_RS20090 () | 5258..5557 | - | 300 | WP_102859852.1 | CcdB family protein | Toxin Detail |
| PhaeoP83_RS20095 () | 5557..5793 | - | 237 | WP_027246608.1 | type II toxin-antitoxin system CcdA family antitoxin | Antitoxin Detail |
| PhaeoP83_RS20100 () | 6189..7103 | - | 915 | WP_102875537.1 | FAD:protein FMN transferase | - |
| PhaeoP83_RS20105 () | 7107..7595 | - | 489 | WP_158525079.1 | nitrous oxide reductase accessory protein NosL | - |
| PhaeoP83_RS20110 () | 7670..8494 | - | 825 | WP_102875538.1 | ABC transporter permease | - |
| PhaeoP83_RS20115 () | 8491..9387 | - | 897 | WP_102859981.1 | ABC transporter ATP-binding protein | - |
| PhaeoP83_RS20120 () | 9353..10684 | - | 1332 | WP_102875539.1 | nitrous oxide reductase family maturation protein NosD | - |
| PhaeoP83_RS20125 () | 10688..12625 | - | 1938 | WP_096873419.1 | TAT-dependent nitrous-oxide reductase | - |
| PhaeoP83_RS20130 () | 12638..14830 | - | 2193 | WP_102875540.1 | regulatory protein NosR | - |
| PhaeoP83_RS20140 () | 15554..15748 | - | 195 | WP_102859860.1 | Crp/Fnr family transcriptional regulator | - |
| PhaeoP83_RS20145 () | 15842..16858 | + | 1017 | WP_199536325.1 | hypothetical protein | - |
| PhaeoP83_RS20150 () | 16985..17696 | - | 712 | Protein_16 | IS5 family transposase | - |
| PhaeoP83_RS20155 () | 17969..18436 | + | 468 | WP_102875541.1 | hypothetical protein | - |
| PhaeoP83_RS20160 () | 18477..19121 | + | 645 | Protein_18 | DUF1738 domain-containing protein | - |
| PhaeoP83_RS20165 () | 19638..20549 | + | 912 | WP_058123598.1 | tyrosine-type recombinase/integrase | - |
| PhaeoP83_RS20170 () | 20546..21490 | + | 945 | WP_102856249.1 | tyrosine-type recombinase/integrase | - |
| PhaeoP83_RS20175 () | 21487..22485 | + | 999 | WP_102856250.1 | tyrosine-type recombinase/integrase | - |
| PhaeoP83_RS20180 () | 22596..22757 | + | 162 | Protein_22 | antirestriction protein | - |
| PhaeoP83_RS20190 () | 23018..23371 | - | 354 | WP_102875593.1 | hypothetical protein | - |
| PhaeoP83_RS20200 () | 23958..24215 | + | 258 | WP_102855967.1 | helix-turn-helix domain-containing protein | - |
| PhaeoP83_RS20205 () | 24380..24607 | + | 228 | WP_102875542.1 | hypothetical protein | - |
| PhaeoP83_RS20210 () | 25049..25231 | + | 183 | WP_102891922.1 | hypothetical protein | - |
| PhaeoP83_RS20220 () | 25893..26615 | - | 723 | WP_102875544.1 | MipA/OmpV family protein | - |
| PhaeoP83_RS20225 () | 26762..27985 | + | 1224 | WP_102859911.1 | AraC family transcriptional regulator | - |
| PhaeoP83_RS20230 () | 28138..29169 | + | 1032 | WP_158526384.1 | alpha/beta fold hydrolase | - |
| PhaeoP83_RS20235 () | 29244..29558 | + | 315 | WP_102854918.1 | hypothetical protein | - |
| PhaeoP83_RS22305 () | 30145..31164 | + | 1020 | WP_123619110.1 | Hint domain-containing protein | - |
| PhaeoP83_RS20245 () | 31802..32095 | + | 294 | WP_102875547.1 | hypothetical protein | - |
| PhaeoP83_RS20250 () | 32065..33633 | - | 1569 | WP_102875548.1 | hypothetical protein | - |
| PhaeoP83_RS20260 () | 34644..35604 | - | 961 | Protein_34 | IS5 family transposase | - |
| PhaeoP83_RS20265 () | 36880..37725 | - | 846 | WP_102859930.1 | energy transducer TonB | - |
| PhaeoP83_RS20270 () | 37722..38111 | - | 390 | WP_102859931.1 | biopolymer transporter ExbD | - |
| PhaeoP83_RS20275 () | 38111..38452 | - | 342 | WP_102859932.1 | biopolymer transporter ExbD | - |
| PhaeoP83_RS20280 () | 38484..39140 | - | 657 | WP_102875550.1 | MotA/TolQ/ExbB proton channel family protein | - |
| PhaeoP83_RS20285 () | 39137..39568 | - | 432 | WP_102875551.1 | hypothetical protein | - |
| PhaeoP83_RS20290 () | 39597..41663 | - | 2067 | WP_199538362.1 | TonB-dependent receptor | - |
| PhaeoP83_RS20295 () | 41897..42949 | + | 1053 | WP_102859935.1 | hemin-degrading factor | - |
| PhaeoP83_RS20300 () | 42949..43818 | + | 870 | WP_102859936.1 | ABC transporter substrate-binding protein | - |
| PhaeoP83_RS20305 () | 43820..44905 | + | 1086 | WP_102875552.1 | iron ABC transporter permease | - |
| PhaeoP83_RS20310 () | 44918..45694 | + | 777 | WP_199538363.1 | heme ABC transporter ATP-binding protein | - |
| PhaeoP83_RS20315 () | 46270..46731 | - | 462 | WP_102875554.1 | hypothetical protein | - |
| PhaeoP83_RS20320 () | 47182..48459 | + | 1278 | WP_123619112.1 | phospholipase D family protein | - |
| PhaeoP83_RS22430 () | 48673..48918 | - | 246 | WP_158526385.1 | hypothetical protein | - |
| PhaeoP83_RS20330 () | 49414..50418 | + | 1005 | WP_102875556.1 | ATP-binding protein | - |
| PhaeoP83_RS20335 () | 50563..52917 | + | 2355 | WP_158526386.1 | S8 family peptidase | - |
| PhaeoP83_RS20340 () | 53268..53621 | - | 354 | WP_040180991.1 | response regulator | - |
| PhaeoP83_RS20345 () | 53653..54885 | - | 1233 | WP_123585448.1 | PAS domain S-box protein | - |
| PhaeoP83_RS22310 () | 55686..56405 | - | 720 | WP_158526387.1 | LuxR family transcriptional regulator | - |
| PhaeoP83_RS20360 () | 56488..58884 | + | 2397 | WP_102875559.1 | VWA domain-containing protein | - |
| PhaeoP83_RS20365 () | 58824..59801 | + | 978 | WP_123619114.1 | hypothetical protein | - |
| PhaeoP83_RS20370 () | 59813..60376 | + | 564 | WP_102875561.1 | hypothetical protein | - |
| PhaeoP83_RS20380 () | 61174..62067 | - | 894 | WP_102875563.1 | LysR family transcriptional regulator | - |
| PhaeoP83_RS20385 () | 62151..65579 | + | 3429 | WP_102875564.1 | molybdopterin-dependent oxidoreductase | - |
| PhaeoP83_RS20390 () | 65597..66538 | + | 942 | WP_102875565.1 | ornithine cyclodeaminase family protein | - |
| PhaeoP83_RS20395 () | 67127..67540 | + | 414 | WP_102859987.1 | MarR family winged helix-turn-helix transcriptional regulator | - |
| PhaeoP83_RS20400 () | 67537..68157 | + | 621 | WP_102859916.1 | cysteine hydrolase | - |
| PhaeoP83_RS20405 () | 68414..68926 | - | 513 | WP_102875566.1 | GNAT family N-acetyltransferase | - |
| PhaeoP83_RS20410 () | 69570..69851 | - | 282 | WP_102875567.1 | hypothetical protein | - |
| PhaeoP83_RS20415 () | 70473..71228 | - | 756 | WP_102875568.1 | alpha/beta hydrolase | - |
| PhaeoP83_RS20420 () | 71228..72529 | - | 1302 | WP_102875569.1 | TRAP transporter large permease | - |
| PhaeoP83_RS20425 () | 72529..73038 | - | 510 | WP_102875570.1 | TRAP transporter small permease | - |
| PhaeoP83_RS20430 () | 73110..74105 | - | 996 | WP_102875571.1 | TRAP transporter substrate-binding protein DctP | - |
| PhaeoP83_RS20435 () | 74322..75206 | + | 885 | WP_024098171.1 | LysR family transcriptional regulator | - |
| PhaeoP83_RS20440 () | 75201..76097 | - | 897 | WP_102875596.1 | LysR family transcriptional regulator | - |
| PhaeoP83_RS20445 () | 76219..77235 | + | 1017 | WP_102875572.1 | D-cysteine desulfhydrase | - |
| PhaeoP83_RS20450 () | 77315..78301 | + | 987 | WP_102875573.1 | putative sulfate exporter family transporter | - |
| PhaeoP83_RS20455 () | 78325..78675 | + | 351 | WP_102875574.1 | RidA family protein | - |
| PhaeoP83_RS20460 () | 79198..79710 | - | 513 | WP_102875575.1 | hypothetical protein | - |
| PhaeoP83_RS20465 () | 80049..81050 | - | 1002 | WP_102875576.1 | IS30 family transposase | - |
| PhaeoP83_RS20470 () | 81312..81722 | + | 411 | Protein_74 | transposase | - |
| PhaeoP83_RS20475 () | 81733..82404 | + | 672 | WP_102875577.1 | LysR family transcriptional regulator substrate-binding protein | - |
| PhaeoP83_RS20485 () | 83782..84453 | + | 672 | WP_027246629.1 | hypothetical protein | - |
| PhaeoP83_RS22315 () | 84523..85227 | + | 705 | WP_123619115.1 | hypothetical protein | - |
| PhaeoP83_RS20490 () | 85317..85712 | + | 396 | WP_102875578.1 | hypothetical protein | - |
| PhaeoP83_RS22435 () | 85781..85954 | + | 174 | WP_024099452.1 | hypothetical protein | - |
| PhaeoP83_RS20495 () | 85996..88053 | - | 2058 | WP_102875579.1 | S8 family serine peptidase | - |
| PhaeoP83_RS22320 () | 88087..89256 | - | 1170 | WP_123619116.1 | phosphatase PAP2 family protein | - |
| PhaeoP83_RS20505 () | 89594..91657 | - | 2064 | WP_102875581.1 | winged helix-turn-helix domain-containing protein | - |
| PhaeoP83_RS20510 () | 92163..92372 | + | 210 | WP_102875582.1 | hypothetical protein | - |
| PhaeoP83_RS20515 () | 92751..93317 | - | 567 | WP_102859963.1 | 3-hydroxyanthranilate 3,4-dioxygenase | - |
| PhaeoP83_RS20520 () | 93363..94793 | - | 1431 | WP_102875583.1 | NAD-dependent succinate-semialdehyde dehydrogenase | - |
| PhaeoP83_RS20525 () | 94910..95632 | - | 723 | WP_102875584.1 | FCD domain-containing protein | - |
| PhaeoP83_RS20530 () | 95740..96990 | + | 1251 | WP_102875585.1 | kynureninase | - |
| PhaeoP83_RS20535 () | 97181..98128 | + | 948 | WP_102875586.1 | tripartite tricarboxylate transporter substrate binding protein | - |
| PhaeoP83_RS20540 () | 98191..98613 | + | 423 | WP_102859968.1 | tripartite tricarboxylate transporter TctB family protein | - |
| PhaeoP83_RS20545 () | 98626..100131 | + | 1506 | WP_102859969.1 | tripartite tricarboxylate transporter permease | - |
| PhaeoP83_RS20550 () | 100284..101264 | + | 981 | WP_102859970.1 | TRAP transporter substrate-binding protein | - |
| PhaeoP83_RS20555 () | 101354..101899 | + | 546 | WP_102859971.1 | TRAP transporter small permease subunit | - |
| PhaeoP83_RS20560 () | 101896..103158 | + | 1263 | WP_102891924.1 | TRAP transporter large permease | - |
| PhaeoP83_RS20565 () | 103153..104100 | - | 948 | WP_024099436.1 | LysR family transcriptional regulator | - |
| PhaeoP83_RS20570 () | 104120..104914 | - | 795 | WP_102875588.1 | aspartate dehydrogenase | - |
| PhaeoP83_RS20575 () | 105103..106056 | + | 954 | WP_102859974.1 | dihydrodipicolinate synthase family protein | - |
| PhaeoP83_RS20580 () | 106196..107074 | + | 879 | WP_102875589.1 | DMT family transporter | - |
| PhaeoP83_RS20585 () | 107300..109048 | + | 1749 | WP_102875590.1 | hypothetical protein | - |
| PhaeoP83_RS20590 () | 109356..109669 | + | 314 | Protein_99 | alpha/beta fold hydrolase | - |
| PhaeoP83_RS20595 () | 109975..111846 | + | 1872 | WP_102875591.1 | serine hydrolase | - |
| PhaeoP83_RS20600 () | 111924..113129 | + | 1206 | WP_102859978.1 | helix-turn-helix transcriptional regulator | - |
| PhaeoP83_RS20605 () | 113232..114239 | - | 1008 | WP_102875592.1 | alpha/beta hydrolase | - |
| PhaeoP83_RS20610 () | 114292..114897 | + | 606 | WP_102859980.1 | GNAT family N-acetyltransferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|