MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 114557 bp
Accession: NZ_CP010445 Location: 614676..729232 Organism: Escherichia coli K-12 strain K-12 MG1655 Replicon: chromosome
Accession: NZ_CP010445 Location: 614676..729232 Organism: Escherichia coli K-12 strain K-12 MG1655 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SF31_RS02925 () | 610784..611347 | + | 564 | WP_000896738.1 | gluconokinase | - |
| SF31_RS02930 () | 611351..612370 | - | 1020 | WP_001309160.1 | NADPH-dependent aldehyde reductase Ahr | - |
| SF31_RS02940 () | 612836..614101 | + | 1266 | Protein_536 | integrase arm-type DNA-binding domain-containing protein | - |
| SF31_RS02955 () | 614433..615661 | + | 1229 | WP_088895425.1 | IS3 family transposase IS2 | Transposase |
| SF31_RS25220 () | 615672..616958 | - | 1287 | Protein_538 | IS66 family transposase | - |
| SF31_RS25735 () | 618274..618408 | - | 135 | Protein_540 | IS3 family transposase | - |
| SF31_RS02990 () | 619083..619271 | + | 189 | WP_000131420.1 | hypothetical protein | - |
| SF31_RS03000 () | 619874..620287 | + | 414 | WP_000483319.1 | hypothetical protein | - |
| SF31_RS03005 () | 620393..620857 | + | 465 | WP_001351581.1 | polymer-forming cytoskeletal protein | - |
| SF31_RS03010 () | 621021..621434 | + | 414 | WP_001351580.1 | hypothetical protein | - |
| SF31_RS03015 () | 621544..622605 | + | 1062 | WP_001092154.1 | EAL domain-containing protein | - |
| SF31_RS03020 () | 623196..626204 | - | 3009 | WP_001143750.1 | Tn3 family transposase ISEc63 | Transposase |
| SF31_RS03025 () | 626368..626919 | + | 552 | WP_001235704.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| SF31_RS03030 () | 626935..629031 | + | 2097 | WP_000422420.1 | hypothetical protein | - |
| SF31_RS03040 () | 629410..629484 | - | 75 | WP_001442103.1 | RepA leader peptide Tap | - |
| SF31_RS03045 () | 629718..629975 | - | 258 | WP_000083834.1 | replication regulatory protein RepA | - |
| SF31_RS03050 () | 630259..630465 | - | 207 | WP_001362723.1 | type I toxin-antitoxin system Hok family toxin | - |
| SF31_RS03055 () | 630809..631120 | + | 312 | WP_000802277.1 | hypothetical protein | - |
| SF31_RS26280 () | 631301..631387 | - | 87 | Protein_553 | endonuclease | - |
| SF31_RS03065 () | 631585..631773 | - | 189 | WP_001345829.1 | hypothetical protein | - |
| SF31_RS23645 () | 631908..632075 | - | 168 | Protein_555 | conjugal transfer protein | - |
| SF31_RS03080 () | 633337..633729 | - | 393 | Protein_557 | fertility inhibition protein FinO | - |
| SF31_RS03085 () | 633784..634530 | - | 747 | WP_000205776.1 | conjugal transfer pilus acetylase TraX | - |
| SF31_RS03090 () | 634550..639820 | - | 5271 | WP_000987005.1 | conjugative transfer relaxase/helicase TraI | - |
| SF31_RS03095 () | 639902..640129 | + | 228 | WP_000450532.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| SF31_RS03100 () | 640129..640527 | + | 399 | WP_000911324.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| SF31_RS03105 () | 640536..642689 | - | 2154 | WP_000009350.1 | type IV conjugative transfer system coupling protein TraD | - |
| SF31_RS25745 () | 642942..643673 | - | 732 | WP_000850422.1 | complement resistance protein TraT | - |
| SF31_RS25750 () | 643698..644219 | - | 522 | WP_000632670.1 | conjugal transfer entry exclusion protein TraS | - |
| SF31_RS03120 () | 644252..647068 | - | 2817 | WP_001007055.1 | conjugal transfer mating pair stabilization protein TraG | - |
| SF31_RS03125 () | 647065..648438 | - | 1374 | WP_021553026.1 | conjugal transfer protein TraH | - |
| SF31_RS03130 () | 648438..648851 | - | 414 | WP_001331260.1 | F-type conjugal transfer protein TrbF | - |
| SF31_RS03135 () | 648805..649146 | - | 342 | WP_001443031.1 | P-type conjugative transfer protein TrbJ | - |
| SF31_RS03140 () | 649076..649621 | - | 546 | WP_000059850.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| SF31_RS03145 () | 649608..649892 | - | 285 | WP_000624109.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| SF31_RS03150 () | 649973..650287 | + | 315 | WP_000415566.1 | protein ArtA | - |
| SF31_RS03155 () | 650289..650636 | - | 348 | WP_001287913.1 | conjugal transfer protein TrbA | - |
| SF31_RS03160 () | 650652..651395 | - | 744 | WP_001030367.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| SF31_RS03165 () | 651388..651645 | - | 258 | WP_000864318.1 | conjugal transfer protein TrbE | - |
| SF31_RS03170 () | 651672..653480 | - | 1809 | WP_000821835.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| SF31_RS03175 () | 653477..654115 | - | 639 | WP_000777688.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| SF31_RS03180 () | 654124..655116 | - | 993 | WP_000830185.1 | conjugal transfer pilus assembly protein TraU | - |
| SF31_RS03185 () | 655113..655745 | - | 633 | WP_001203720.1 | type-F conjugative transfer system protein TraW | - |
| SF31_RS03190 () | 655742..656128 | - | 387 | WP_000099690.1 | type-F conjugative transfer system protein TrbI | - |
| SF31_RS03195 () | 656125..658752 | - | 2628 | WP_001064243.1 | type IV secretion system protein TraC | - |
| SF31_RS23655 () | 658912..659133 | - | 222 | WP_001278689.1 | conjugal transfer protein TraR | - |
| SF31_RS03205 () | 659268..659783 | - | 516 | WP_010892541.1 | type IV conjugative transfer system lipoprotein TraV | - |
| SF31_RS03210 () | 659780..660031 | - | 252 | WP_001038342.1 | conjugal transfer protein TrbG | - |
| SF31_RS03215 () | 660043..660273 | - | 231 | WP_071587746.1 | conjugal transfer protein TrbD | - |
| SF31_RS03220 () | 660227..660817 | - | 591 | WP_000002792.1 | conjugal transfer protein TraP | - |
| SF31_RS03225 () | 660807..662234 | - | 1428 | WP_000146685.1 | conjugal transfer protein TraB | - |
| SF31_RS03230 () | 662234..662938 | - | 705 | WP_072095570.1 | type-F conjugative transfer system secretin TraK | - |
| SF31_RS03235 () | 662949..663515 | - | 567 | WP_000399792.1 | type IV conjugative transfer system protein TraE | - |
| SF31_RS03240 () | 663537..663848 | - | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| SF31_RS03245 () | 663863..664228 | - | 366 | WP_000994779.1 | type IV conjugative transfer system pilin TraA | - |
| SF31_RS03250 () | 664261..664656 | - | 396 | WP_052730098.1 | conjugal transfer relaxosome protein TraY | - |
| SF31_RS03255 () | 664755..665444 | - | 690 | WP_000283385.1 | conjugal transfer transcriptional regulator TraJ | - |
| SF31_RS03260 () | 665631..666014 | - | 384 | WP_001151527.1 | relaxosome protein TraM | - |
| SF31_RS03265 () | 666347..666937 | + | 591 | WP_170919186.1 | hypothetical protein | VF |
| SF31_RS26285 () | 667233..667391 | - | 159 | Protein_595 | DUF945 domain-containing protein | - |
| SF31_RS25755 () | 668037..668390 | - | 354 | Protein_596 | IS3 family transposase | - |
| SF31_RS03275 () | 668451..668600 | - | 150 | Protein_597 | IS66 family transposase IS679 | Transposase |
| SF31_RS03285 () | 668692..669920 | + | 1229 | WP_088895425.1 | IS3 family transposase IS2 | Transposase |
| SF31_RS23235 () | 670013..671193 | - | 1181 | Protein_599 | phosphoethanolamine transferase | - |
| SF31_RS23675 () | 671780..672009 | + | 230 | Protein_600 | transposase domain-containing protein | - |
| SF31_RS03315 () | 672523..673869 | - | 1347 | WP_000483767.1 | IS4 family transposase IS4 | Transposase |
| SF31_RS03320 () | 674478..675695 | + | 1218 | WP_000179691.1 | MFS transporter | - |
| SF31_RS03325 () | 675707..676825 | + | 1119 | WP_000611568.1 | Gfo/Idh/MocA family oxidoreductase | - |
| SF31_RS25235 () | 676868..676993 | + | 126 | WP_000594405.1 | hypothetical protein | - |
| SF31_RS03330 () | 677046..677303 | - | 258 | WP_000254999.1 | hypothetical protein | - |
| SF31_RS25760 () | 677293..677529 | + | 237 | Protein_606 | MFS transporter | - |
| SF31_RS03340 () | 677617..677874 | + | 258 | Protein_607 | IS3 family transposase IS911 | Transposase |
| SF31_RS03345 () | 677886..679037 | - | 1152 | WP_001254932.1 | IS30 family transposase IS30D | Transposase |
| SF31_RS03350 () | 679102..679362 | - | 261 | Protein_609 | IS3 family transposase ISSfl10 | Transposase |
| SF31_RS03355 () | 679429..680213 | + | 785 | Protein_610 | IS3 family transposase ISEc52 | Transposase |
| SF31_RS25765 () | 680296..680553 | + | 258 | WP_000177057.1 | hypothetical protein | - |
| SF31_RS03365 () | 681110..681877 | - | 768 | WP_000175457.1 | Fe(3+) dicitrate transport ATP-binding protein FecE | VF |
| SF31_RS03370 () | 681878..682834 | - | 957 | WP_000684852.1 | Fe(3+) dicitrate transport system permease protein FecD | VF |
| SF31_RS03375 () | 682831..683829 | - | 999 | WP_000125187.1 | Fe(3+) dicitrate transport system permease protein FecC | VF |
| SF31_RS03380 () | 683826..684728 | - | 903 | WP_000879155.1 | Fe(3+) dicitrate ABC transporter substrate-binding protein FecB | - |
| SF31_RS03385 () | 684773..687097 | - | 2325 | WP_000188283.1 | Fe(3+) dicitrate transport protein FecA | - |
| SF31_RS03390 () | 687184..688137 | - | 954 | WP_001068910.1 | fec operon regulator FecR | - |
| SF31_RS03395 () | 688134..688655 | - | 522 | WP_001283626.1 | putative RNA polymerase sigma factor FecI | VF |
| SF31_RS25245 () | 688947..689644 | + | 698 | Protein_619 | IS1 family transposase | - |
| SF31_RS03415 () | 689758..690744 | - | 987 | WP_000373366.1 | sugar-binding transcriptional regulator | - |
| SF31_RS03425 () | 691091..692440 | - | 1350 | WP_001128363.1 | GntP family permease | - |
| SF31_RS03430 () | 692547..694514 | - | 1968 | WP_000116326.1 | xylonate dehydratase YjhG | - |
| SF31_RS03435 () | 694525..695430 | - | 906 | WP_000714563.1 | dihydrodipicolinate synthase family protein | - |
| SF31_RS03440 () | 695435..696223 | - | 789 | WP_000251798.1 | IclR family transcriptional regulator | - |
| SF31_RS03445 () | 696526..697308 | - | 783 | WP_000082780.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| SF31_RS03450 () | 697325..697957 | - | 633 | WP_000600622.1 | ribulose-phosphate 3 epimerase family protein | - |
| SF31_RS03455 () | 697969..698400 | - | 432 | WP_000606406.1 | PTS sugar transporter subunit IIA | - |
| SF31_RS03460 () | 698531..699337 | - | 807 | WP_000118626.1 | BtpA family protein SgcQ | - |
| SF31_RS03465 () | 699350..700663 | - | 1314 | WP_000460843.1 | galactitol-specific PTS transporter subunit IIC | - |
| SF31_RS03470 () | 700675..700953 | - | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB | - |
| SF31_RS03475 () | 700950..702071 | - | 1122 | WP_000010829.1 | M42 family metallopeptidase | - |
| SF31_RS26290 () | 702316..702432 | - | 117 | Protein_632 | VOC family protein | - |
| SF31_RS25250 () | 702470..702688 | - | 219 | Protein_633 | hypothetical protein | - |
| SF31_RS03480 () | 702857..703603 | - | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| SF31_RS03485 () | 703659..704204 | - | 546 | WP_001309181.1 | N-acetyltransferase | Antitoxin Detail |
| SF31_RS03490 () | 704216..704473 | - | 258 | WP_001054376.1 | hypothetical protein | Toxin Detail |
| SF31_RS25770 () | 704850..705095 | - | 246 | Protein_637 | GNAT family N-acetyltransferase | - |
| SF31_RS03505 () | 705211..706451 | + | 1241 | Protein_638 | helicase YjhR | - |
| SF31_RS03510 () | 707034..708014 | - | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| SF31_RS03515 () | 708079..709185 | - | 1107 | WP_001309184.1 | N-acetylneuraminate epimerase | - |
| SF31_RS03520 () | 709205..709921 | - | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| SF31_RS03535 () | 711377..711979 | + | 603 | WP_000790583.1 | Tyrosine recombinase XerC | VF |
| SF31_RS03540 () | 712457..713053 | + | 597 | WP_000044711.1 | Tyrosine recombinase XerD | VF |
| SF31_RS03550 () | 713535..714083 | + | 549 | WP_000695564.1 | Type-1 fimbrial protein, A chain | VF |
| SF31_RS03555 () | 714148..714687 | + | 540 | WP_000824114.1 | putative major fimbrial subunit LpfA | VF |
| SF31_RS03560 () | 714724..715449 | + | 726 | WP_000066547.1 | Chaperone protein FimC | VF |
| SF31_RS03565 () | 715516..718152 | + | 2637 | WP_000121005.1 | Outer membrane usher protein FimD | VF |
| SF31_RS03570 () | 718162..718692 | + | 531 | WP_001244827.1 | Protein FimF | VF |
| SF31_RS03575 () | 718705..719208 | + | 504 | WP_000870592.1 | Protein FimG | VF |
| SF31_RS03580 () | 719228..720130 | + | 903 | WP_000832247.1 | Type 1 fimbrin D-mannose specific adhesin | VF |
| SF31_RS03585 () | 720373..721716 | - | 1344 | WP_000558251.1 | gluconate permease GntP | - |
| SF31_RS03595 () | 722056..723240 | + | 1185 | WP_000438562.1 | mannonate dehydratase | - |
| SF31_RS03600 () | 723321..724781 | + | 1461 | WP_000208205.1 | fructuronate reductase | - |
| SF31_RS03610 () | 724996..725769 | + | 774 | WP_000833679.1 | Uxu operon transcriptional regulator | - |
| SF31_RS03615 () | 725910..726740 | - | 831 | WP_000062552.1 | YjfZ/YjiC family protein | - |
| SF31_RS25775 () | 727333..727416 | + | 84 | WP_120795393.1 | iraD leader peptide IdlP | - |
| SF31_RS03635 () | 727413..727805 | + | 393 | WP_001309187.1 | anti-adapter protein IraD | - |
| SF31_RS03640 () | 727798..728709 | - | 912 | WP_000340740.1 | hypochlorite stress DNA-binding transcriptional regulator HypT | - |
| SF31_RS03645 () | 728774..729946 | - | 1173 | WP_000568432.1 | beta-aspartyl-peptidase | - |
| SF31_RS03650 () | 729959..730420 | - | 462 | WP_000211971.1 | YjiG family protein | - |
| SF31_RS03655 () | 730417..731100 | - | 684 | WP_001295597.1 | nucleoside recognition pore and gate family inner membrane transporter | - |
| SF31_RS03660 () | 731350..731904 | + | 555 | WP_001151855.1 | RNA 2'-phosphotransferase | - |
| SF31_RS03665 () | 731917..733095 | - | 1179 | WP_001141220.1 | MFS transporter | - |
| SF31_RS03670 () | 733163..734023 | - | 861 | WP_001350572.1 | YjiK family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|