MGE detailed information
MGE type: Genomic_island MGE length: 26738 bp
Accession: NZ_CP010315 Location: 4878729..4905466 Organism: Escherichia coli strain 789 Replicon: chromosome
Accession: NZ_CP010315 Location: 4878729..4905466 Organism: Escherichia coli strain 789 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AC789_RS23990 () | 4873889..4874110 | + | 222 | WP_000692345.1 | DUF987 domain-containing protein | - |
| AC789_RS24000 () | 4874273..4874641 | + | 369 | WP_001295723.1 | type IV toxin-antitoxin system YeeU family antitoxin | - |
| AC789_RS28155 () | 4874731..4874829 | + | 99 | Protein_4541 | TA system toxin CbtA family protein | - |
| AC789_RS24005 () | 4875569..4876828 | + | 1260 | WP_000132327.1 | S-methyl-5-thioribose kinase | - |
| AC789_RS24010 () | 4876838..4877953 | + | 1116 | WP_001022014.1 | S-methyl-5-thioribose-1-phosphate isomerase | - |
| AC789_RS24015 () | 4877984..4878625 | + | 642 | WP_000439687.1 | L-fuculose-phosphate aldolase | - |
| AC789_RS24020 () | 4878866..4879732 | + | 867 | WP_071590469.1 | multidrug DMT transporter permease | - |
| AC789_RS24025 () | 4879773..4880759 | - | 987 | WP_000373366.1 | sugar-binding transcriptional regulator | - |
| AC789_RS24035 () | 4881106..4882455 | - | 1350 | WP_001128363.1 | GntP family permease | - |
| AC789_RS24040 () | 4882562..4884529 | - | 1968 | WP_000116326.1 | xylonate dehydratase YjhG | - |
| AC789_RS24045 () | 4884540..4885445 | - | 906 | WP_077790354.1 | dihydrodipicolinate synthase family protein | - |
| AC789_RS24050 () | 4885450..4886238 | - | 789 | WP_000251798.1 | IclR family transcriptional regulator | - |
| AC789_RS24055 () | 4886541..4887323 | - | 783 | WP_000082780.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| AC789_RS24060 () | 4887340..4887972 | - | 633 | WP_000600622.1 | ribulose-phosphate 3 epimerase family protein | - |
| AC789_RS24065 () | 4887984..4888415 | - | 432 | WP_000606406.1 | PTS sugar transporter subunit IIA | - |
| AC789_RS24070 () | 4888546..4889352 | - | 807 | WP_000118626.1 | BtpA family protein SgcQ | - |
| AC789_RS24075 () | 4889365..4890678 | - | 1314 | WP_000460843.1 | galactitol-specific PTS transporter subunit IIC | - |
| AC789_RS24080 () | 4890690..4890968 | - | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB | - |
| AC789_RS24085 () | 4890965..4892086 | - | 1122 | WP_000010829.1 | M42 family metallopeptidase | - |
| AC789_RS30080 () | 4892331..4892447 | - | 117 | Protein_4558 | VOC family protein | - |
| AC789_RS29085 () | 4892485..4892703 | - | 219 | Protein_4559 | hypothetical protein | - |
| AC789_RS24090 () | 4892872..4893618 | - | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| AC789_RS24095 () | 4893674..4894219 | - | 546 | WP_001309181.1 | N-acetyltransferase | Antitoxin Detail |
| AC789_RS24100 () | 4894231..4894488 | - | 258 | WP_001054376.1 | hypothetical protein | Toxin Detail |
| AC789_RS29675 () | 4894865..4895110 | - | 246 | Protein_4563 | GNAT family N-acetyltransferase | - |
| AC789_RS24115 () | 4895226..4896466 | + | 1241 | Protein_4564 | helicase YjhR | - |
| AC789_RS24120 () | 4897049..4898029 | - | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| AC789_RS24125 () | 4898094..4899200 | - | 1107 | WP_044502399.1 | N-acetylneuraminate epimerase | - |
| AC789_RS24130 () | 4899220..4899936 | - | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| AC789_RS24145 () | 4901393..4901995 | + | 603 | WP_000790583.1 | Tyrosine recombinase XerC | VF |
| AC789_RS24150 () | 4902473..4903069 | + | 597 | WP_000044711.1 | Tyrosine recombinase XerD | VF |
| AC789_RS24160 () | 4903552..4904100 | + | 549 | WP_044502401.1 | Type-1 fimbrial protein, A chain | VF |
| AC789_RS24165 () | 4904165..4904704 | + | 540 | WP_000824114.1 | putative major fimbrial subunit LpfA | VF |
| AC789_RS24170 () | 4904741..4905466 | + | 726 | WP_000066560.1 | Chaperone protein FimC | VF |
| AC789_RS24175 () | 4905533..4908169 | + | 2637 | WP_000121002.1 | fimbrial usher FimD | - |
| AC789_RS24180 () | 4908179..4908709 | + | 531 | WP_001244827.1 | type 1 fimbria minor subunit FimF | - |
| AC789_RS24185 () | 4908722..4909225 | + | 504 | WP_000870592.1 | type 1 fimbria minor subunit FimG | - |
| AC789_RS24190 () | 4909245..4910147 | + | 903 | WP_000832247.1 | type 1 fimbria D-mannose specific adhesin FimH | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|