MGE detailed information
MGE type: Prophage MGE length: 43619 bp
Accession: NZ_CP010300 Location: 851511..895129 Organism: Staphylococcus aureus strain ATCC BAA1680 Replicon: chromosome
Accession: NZ_CP010300 Location: 851511..895129 Organism: Staphylococcus aureus strain ATCC BAA1680 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RM28_RS03830 () | 846572..848089 | + | 1518 | WP_001085505.1 | 2,3-bisphosphoglycerate-independent phosphoglycerate mutase | - |
| RM28_RS03835 () | 848219..849523 | + | 1305 | WP_001121760.1 | phosphopyruvate hydratase | - |
| RM28_RS03840 () | 849863..850321 | + | 459 | WP_000785252.1 | hypothetical protein | - |
| RM28_RS03845 () | 850388..850621 | + | 234 | WP_000556760.1 | preprotein translocase subunit SecG | - |
| RM28_RS03850 () | 850737..851477 | + | 741 | WP_001165952.1 | carboxylesterase | - |
| RM28_RS03855 () | 851511..853883 | + | 2373 | WP_001050064.1 | ribonuclease R | - |
| RM28_RS03860 () | 853905..854369 | + | 465 | WP_001085185.1 | SsrA-binding protein SmpB | - |
| RM28_RS03865 () | 855691..856014 | - | 324 | WP_001058299.1 | hypothetical protein | - |
| RM28_RS15525 () | 856030..856283 | - | 254 | Protein_796 | hypothetical protein | - |
| RM28_RS03870 () | 856368..857096 | - | 729 | WP_000757406.1 | DUF5067 domain-containing protein | - |
| RM28_RS13975 () | 857532..857687 | + | 156 | WP_001790158.1 | hypothetical protein | - |
| RM28_RS03875 () | 857695..858216 | + | 522 | Protein_799 | hypothetical protein | - |
| RM28_RS03880 () | 858355..858885 | + | 531 | WP_001167175.1 | N-acetyltransferase | - |
| RM28_RS03885 () | 859148..861949 | + | 2802 | WP_001056223.1 | hypothetical protein | VF |
| RM28_RS03890 () | 862170..863696 | + | 1527 | WP_000791729.1 | hypothetical protein | VF |
| RM28_RS03895 () | 864047..865069 | + | 1023 | WP_000728056.1 | extracellular matrix protein-binding adhesin Emp | - |
| RM28_RS03900 () | 865404..865874 | + | 471 | WP_000824472.1 | hypothetical protein | VF |
| RM28_RS03905 () | 866215..866901 | + | 687 | WP_001548082.1 | thermonuclease family protein | - |
| RM28_RS03910 () | 867258..867458 | + | 201 | WP_001059082.1 | cold-shock protein | - |
| RM28_RS03915 () | 867954..868172 | - | 219 | WP_000005886.1 | hypothetical protein | - |
| RM28_RS03920 () | 868234..868518 | - | 285 | WP_001004395.1 | hypothetical protein | - |
| RM28_RS03925 () | 868606..869175 | - | 570 | WP_001106654.1 | hypothetical protein | - |
| RM28_RS03930 () | 869363..869551 | - | 189 | WP_000052078.1 | hypothetical protein | Toxin Detail |
| RM28_RS03935 () | 869580..869840 | - | 261 | WP_001059690.1 | hypothetical protein | Antitoxin Detail |
| RM28_RS03940 () | 870181..870384 | + | 204 | WP_000145163.1 | sterile alpha motif-like domain-containing protein | - |
| RM28_RS03945 () | 870381..870617 | - | 237 | WP_000368687.1 | hypothetical protein | - |
| RM28_RS03950 () | 870842..871423 | + | 582 | WP_001140686.1 | phosphoglycerate mutase family protein | - |
| RM28_RS03955 () | 871496..872113 | - | 618 | WP_000255561.1 | LysE/ArgO family amino acid transporter | - |
| RM28_RS03960 () | 872268..872762 | - | 495 | WP_000569884.1 | GNAT family N-acetyltransferase | - |
| RM28_RS03965 () | 873161..873583 | - | 423 | WP_000974460.1 | organic hydroperoxide resistance protein | - |
| RM28_RS03970 () | 873731..874447 | + | 717 | WP_000150017.1 | type I 3-dehydroquinate dehydratase | - |
| RM28_RS03975 () | 874530..875069 | + | 540 | WP_000422909.1 | nitroreductase | - |
| RM28_RS03980 () | 875219..875539 | - | 321 | WP_001190695.1 | thioredoxin family protein | - |
| RM28_RS03985 () | 875683..876039 | + | 357 | WP_000589549.1 | arsenate reductase family protein | - |
| RM28_RS03990 () | 876197..876577 | + | 381 | WP_000290485.1 | glycine cleavage system protein GcvH | - |
| RM28_RS03995 () | 876756..877634 | + | 879 | WP_000932219.1 | DUF1963 domain-containing protein | - |
| RM28_RS04000 () | 878376..878762 | + | 387 | WP_001018962.1 | toprim domain-containing protein | - |
| RM28_RS04005 () | 878755..879051 | + | 297 | WP_001065801.1 | thioredoxin family protein | - |
| RM28_RS04010 () | 879301..880326 | + | 1026 | WP_000571218.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| RM28_RS04015 () | 880319..881014 | + | 696 | WP_000520233.1 | ABC transporter permease | - |
| RM28_RS04020 () | 881032..881853 | + | 822 | WP_000732326.1 | hypothetical protein | VF |
| RM28_RS04025 () | 881996..883216 | - | 1221 | WP_000266158.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| RM28_RS04030 () | 883304..884032 | - | 729 | WP_000734020.1 | hypothetical protein | VF |
| RM28_RS04035 () | 884056..884784 | - | 729 | WP_001033321.1 | hypothetical protein | VF |
| RM28_RS04040 () | 884801..885259 | - | 459 | WP_000281658.1 | ImmA/IrrE family metallo-endopeptidase | - |
| RM28_RS04045 () | 885271..885603 | - | 333 | WP_001260004.1 | helix-turn-helix transcriptional regulator | - |
| RM28_RS04050 () | 885796..886059 | + | 264 | WP_000243849.1 | helix-turn-helix domain-containing protein | - |
| RM28_RS04055 () | 886052..886324 | + | 273 | WP_000091732.1 | helix-turn-helix domain-containing protein | - |
| RM28_RS13990 () | 886336..886509 | + | 174 | WP_000784892.1 | hypothetical protein | - |
| RM28_RS04060 () | 886476..886679 | + | 204 | WP_001231376.1 | hypothetical protein | - |
| RM28_RS04065 () | 886681..887064 | + | 384 | WP_000403840.1 | hypothetical protein | - |
| RM28_RS04070 () | 887065..887313 | + | 249 | WP_001103959.1 | DUF1474 family protein | - |
| RM28_RS04075 () | 887405..889777 | + | 2373 | WP_000985235.1 | primase | - |
| RM28_RS04080 () | 890448..890792 | + | 345 | WP_001081424.1 | hypothetical protein | - |
| RM28_RS04085 () | 891017..891223 | + | 207 | WP_000884055.1 | hypothetical protein | - |
| RM28_RS04090 () | 891210..892268 | + | 1059 | WP_000657538.1 | phage capsid protein | - |
| RM28_RS04095 () | 892452..892943 | + | 492 | WP_000253084.1 | hypothetical protein | - |
| RM28_RS14000 () | 892943..893095 | + | 153 | Protein_845 | terminase small subunit | - |
| RM28_RS04100 () | 893372..894340 | + | 969 | WP_000801979.1 | Abi family protein | - |
| RM28_RS04105 () | 894575..895129 | - | 555 | WP_031864735.1 | DUF4888 domain-containing protein | - |
| RM28_RS04110 () | 896163..896357 | + | 195 | WP_000752917.1 | CsbD family protein | - |
| RM28_RS04115 () | 896590..897441 | - | 852 | WP_001183858.1 | DUF368 domain-containing protein | - |
| RM28_RS04120 () | 897769..898530 | + | 762 | WP_000168845.1 | Fe-S cluster assembly ATPase SufC | - |
| RM28_RS04125 () | 898628..899935 | + | 1308 | WP_000205572.1 | Fe-S cluster assembly protein SufD | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|