MGE detailed information
MGE type: Prophage MGE length: 62784 bp
Accession: NZ_CP010300 Location: 2082043..2144826 Organism: Staphylococcus aureus strain ATCC BAA1680 Replicon: chromosome
Accession: NZ_CP010300 Location: 2082043..2144826 Organism: Staphylococcus aureus strain ATCC BAA1680 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RM28_RS09680 () | 2077498..2078178 | - | 681 | WP_000645727.1 | phenol-soluble modulin export ABC transporter permease subunit PmtB | - |
| RM28_RS09685 () | 2078179..2079075 | - | 897 | WP_000991302.1 | phenol-soluble modulin export ABC transporter ATP-binding protein PmtA | - |
| RM28_RS09690 () | 2079072..2079452 | - | 381 | WP_000691584.1 | GntR family transcriptional regulator | - |
| RM28_RS14705 () | 2079716..2079892 | - | 177 | WP_000681968.1 | hypothetical protein | - |
| RM28_RS14710 () | 2080135..2080233 | - | 99 | WP_000990056.1 | hypothetical protein | - |
| RM28_RS09700 () | 2080433..2081719 | + | 1287 | WP_001068542.1 | aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme | - |
| RM28_RS09705 () | 2082043..2082357 | - | 315 | Protein_1995 | hypothetical protein | VF |
| RM28_RS09710 () | 2082344..2084098 | - | 1755 | WP_001549158.1 | hypothetical protein | VF |
| RM28_RS09715 () | 2084484..2084734 | + | 251 | Protein_1997 | hypothetical protein | VF |
| RM28_RS14715 () | 2085056..2085235 | + | 180 | WP_000669789.1 | hypothetical protein | - |
| RM28_RS14725 () | 2085546..2085806 | + | 261 | WP_001791826.1 | hypothetical protein | - |
| RM28_RS09720 () | 2085859..2086209 | - | 351 | WP_000702263.1 | hypothetical protein | VF |
| RM28_RS09725 () | 2086894..2087343 | + | 450 | WP_000727649.1 | hypothetical protein | VF |
| RM28_RS15425 () | 2087438..2087773 | - | 336 | Protein_2002 | SH3 domain-containing protein | - |
| RM28_RS09735 () | 2088423..2088914 | - | 492 | WP_000919350.1 | hypothetical protein | VF |
| RM28_RS09740 () | 2089105..2089860 | - | 756 | WP_000861038.1 | CHAP domain-containing protein | - |
| RM28_RS09745 () | 2089872..2090126 | - | 255 | WP_000611512.1 | phage holin | - |
| RM28_RS14745 () | 2090178..2090285 | + | 108 | WP_001791821.1 | hypothetical protein | - |
| - () | 2090207..2090346 | + | 140 | NuclAT_0 | - | - |
| - () | 2090207..2090346 | + | 140 | NuclAT_0 | - | - |
| - () | 2090207..2090346 | + | 140 | NuclAT_0 | - | - |
| - () | 2090207..2090346 | + | 140 | NuclAT_0 | - | - |
| - () | 2090215..2090270 | + | 56 | - | - | Antitoxin Detail |
| RM28_RS14750 () | 2090338..2090514 | - | 177 | WP_011447039.1 | putative holin-like toxin | Toxin Detail |
| RM28_RS09755 () | 2090664..2090960 | - | 297 | WP_000539688.1 | DUF2951 domain-containing protein | - |
| RM28_RS09760 () | 2091018..2091305 | - | 288 | WP_001040261.1 | hypothetical protein | - |
| RM28_RS14755 () | 2091352..2091504 | - | 153 | WP_001153681.1 | hypothetical protein | - |
| RM28_RS09770 () | 2091494..2095279 | - | 3786 | WP_000582165.1 | hypothetical protein | - |
| RM28_RS09775 () | 2095295..2096779 | - | 1485 | WP_000567394.1 | phage tail family protein | - |
| RM28_RS09780 () | 2096776..2101305 | - | 4530 | WP_001551779.1 | phage tail tape measure protein | - |
| RM28_RS15560 () | 2101362..2101499 | - | 138 | WP_001549167.1 | hypothetical protein | - |
| RM28_RS09790 () | 2101550..2101900 | - | 351 | WP_001096354.1 | hypothetical protein | - |
| RM28_RS14760 () | 2101950..2102189 | - | 240 | WP_094969769.1 | Ig-like domain-containing protein | - |
| RM28_RS09795 () | 2102216..2102860 | - | 645 | WP_000260578.1 | phage tail protein | - |
| RM28_RS09800 () | 2102864..2103268 | - | 405 | WP_000565500.1 | hypothetical protein | - |
| RM28_RS09805 () | 2103265..2103669 | - | 405 | WP_000114229.1 | HK97 gp10 family phage protein | - |
| RM28_RS09810 () | 2103666..2104028 | - | 363 | WP_000755150.1 | head-tail adaptor protein | - |
| RM28_RS09815 () | 2104012..2104296 | - | 285 | WP_000150936.1 | phage head-tail adapter protein | - |
| RM28_RS09820 () | 2104286..2104570 | - | 285 | WP_000238236.1 | hypothetical protein | - |
| RM28_RS09825 () | 2104590..2105735 | - | 1146 | WP_000154559.1 | phage major capsid protein | - |
| RM28_RS09830 () | 2105759..2106496 | - | 738 | WP_000642728.1 | Clp protease ClpP | - |
| RM28_RS09835 () | 2106480..2107667 | - | 1188 | WP_039598672.1 | phage portal protein | - |
| RM28_RS09840 () | 2107683..2109344 | - | 1662 | WP_000625088.1 | terminase large subunit | - |
| RM28_RS09845 () | 2109341..2109685 | - | 345 | WP_000402904.1 | hypothetical protein | - |
| RM28_RS09850 () | 2109815..2110114 | - | 300 | WP_000988336.1 | HNH endonuclease | - |
| RM28_RS09855 () | 2110346..2110762 | - | 417 | WP_000590122.1 | hypothetical protein | - |
| RM28_RS09860 () | 2110790..2110990 | - | 201 | WP_000265043.1 | DUF1514 family protein | - |
| RM28_RS09865 () | 2110990..2111139 | - | 150 | WP_000595265.1 | transcriptional activator RinB | - |
| RM28_RS09870 () | 2111136..2111522 | - | 387 | WP_000592207.1 | hypothetical protein | - |
| RM28_RS09875 () | 2111519..2111725 | - | 207 | WP_000195803.1 | DUF1381 domain-containing protein | - |
| RM28_RS09880 () | 2111722..2111967 | - | 246 | WP_001282074.1 | hypothetical protein | - |
| RM28_RS09885 () | 2112004..2112537 | - | 534 | WP_000181819.1 | dUTP pyrophosphatase | - |
| RM28_RS09890 () | 2112530..2112772 | - | 243 | WP_000700108.1 | hypothetical protein | - |
| RM28_RS09895 () | 2112762..2112998 | - | 237 | WP_001065101.1 | DUF1024 family protein | - |
| RM28_RS09900 () | 2112991..2113362 | - | 372 | WP_001549172.1 | hypothetical protein | - |
| RM28_RS09905 () | 2113371..2113613 | - | 243 | WP_000131383.1 | phi PVL orf 51-like protein | - |
| RM28_RS09910 () | 2113617..2113985 | - | 369 | WP_000101288.1 | hypothetical protein | - |
| RM28_RS09915 () | 2113998..2114402 | - | 405 | WP_000401977.1 | RusA family crossover junction endodeoxyribonuclease | - |
| RM28_RS09920 () | 2114411..2114629 | - | 219 | WP_000338530.1 | hypothetical protein | - |
| RM28_RS09925 () | 2114636..2115529 | - | 894 | WP_000148333.1 | DnaD domain-containing protein | - |
| RM28_RS09930 () | 2115559..2116029 | - | 471 | WP_000934753.1 | single-stranded DNA-binding protein | - |
| RM28_RS09935 () | 2116030..2116647 | - | 618 | WP_071665632.1 | MBL fold metallo-hydrolase | - |
| RM28_RS09940 () | 2116728..2117648 | - | 921 | WP_000138475.1 | recombinase RecT | - |
| RM28_RS09945 () | 2117650..2119593 | - | 1944 | WP_000700561.1 | AAA family ATPase | - |
| RM28_RS14765 () | 2119602..2119865 | - | 264 | WP_001205732.1 | hypothetical protein | - |
| RM28_RS09950 () | 2119874..2120134 | - | 261 | WP_000291513.1 | DUF1108 family protein | - |
| RM28_RS09955 () | 2120174..2120434 | - | 261 | WP_001549178.1 | DUF2482 family protein | - |
| RM28_RS14770 () | 2120529..2120690 | - | 162 | WP_001285960.1 | DUF1270 domain-containing protein | - |
| RM28_RS09965 () | 2120687..2121007 | - | 321 | WP_001120199.1 | DUF771 domain-containing protein | - |
| RM28_RS09970 () | 2121066..2121296 | + | 231 | WP_000549548.1 | hypothetical protein | - |
| RM28_RS15565 () | 2121293..2121469 | - | 177 | WP_001001356.1 | hypothetical protein | - |
| RM28_RS09975 () | 2121485..2122237 | - | 753 | WP_001148642.1 | phage antirepressor KilAC domain-containing protein | - |
| RM28_RS09980 () | 2122288..2122617 | + | 330 | WP_000180411.1 | hypothetical protein | - |
| RM28_RS09985 () | 2122606..2122821 | - | 216 | WP_001025404.1 | DUF2829 domain-containing protein | - |
| RM28_RS09990 () | 2122837..2123100 | - | 264 | WP_000854072.1 | helix-turn-helix domain-containing protein | - |
| RM28_RS14775 () | 2123097..2123270 | - | 174 | WP_001801500.1 | hypothetical protein | - |
| RM28_RS09995 () | 2123233..2123946 | + | 714 | WP_001031454.1 | XRE family transcriptional regulator | - |
| RM28_RS10000 () | 2123962..2124894 | + | 933 | WP_000759682.1 | ATP-dependent helicase | - |
| RM28_RS10005 () | 2124900..2125241 | + | 342 | WP_000591749.1 | hypothetical protein | - |
| RM28_RS10010 () | 2125445..2125627 | + | 183 | WP_000705246.1 | hypothetical protein | - |
| RM28_RS10015 () | 2125705..2126418 | + | 714 | WP_001549185.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| RM28_RS10020 () | 2126609..2127646 | + | 1038 | WP_000857199.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| RM28_RS10025 () | 2127697..2128527 | + | 831 | Protein_2066 | hypothetical protein | VF |
| RM28_RS10030 () | 2128765..2129781 | - | 1017 | WP_000595324.1 | hypothetical protein | VF |
| RM28_RS10035 () | 2129803..2130858 | - | 1056 | WP_000791407.1 | hypothetical protein | VF |
| RM28_RS10040 () | 2131293..2132516 | + | 1224 | WP_000206639.1 | ArgE/DapE family deacylase | - |
| RM28_RS10045 () | 2132888..2133733 | - | 846 | WP_000812010.1 | class I SAM-dependent methyltransferase | - |
| RM28_RS10050 () | 2133795..2134706 | - | 912 | WP_000825510.1 | hypothetical protein | VF |
| RM28_RS10055 () | 2134867..2136174 | + | 1308 | WP_001045079.1 | TrkH family potassium uptake protein | - |
| RM28_RS10060 () | 2137027..2137470 | - | 444 | WP_000022887.1 | GNAT family N-acetyltransferase | - |
| RM28_RS10065 () | 2137635..2138012 | - | 378 | WP_001797573.1 | hypothetical protein | - |
| RM28_RS10070 () | 2138330..2138920 | - | 591 | WP_001293058.1 | terminase small subunit | - |
| RM28_RS10075 () | 2138917..2139129 | - | 213 | WP_000128898.1 | hypothetical protein | - |
| RM28_RS14790 () | 2139190..2139736 | + | 547 | Protein_2077 | site-specific integrase | - |
| RM28_RS10080 () | 2139831..2141447 | - | 1617 | WP_000240645.1 | 60 kDa chaperonin | VF |
| RM28_RS10085 () | 2141523..2141807 | - | 285 | WP_000917289.1 | co-chaperone GroES | - |
| RM28_RS10090 () | 2141982..2142725 | + | 744 | WP_000197635.1 | CPBP family intramembrane metalloprotease | - |
| RM28_RS10095 () | 2142750..2144003 | - | 1254 | WP_000120307.1 | hypothetical protein | VF |
| RM28_RS10100 () | 2144200..2144826 | + | 627 | WP_000522384.1 | nitroreductase family protein | - |
| RM28_RS10105 () | 2145187..2145972 | + | 786 | WP_000867960.1 | carbon-nitrogen family hydrolase | - |
| RM28_RS10110 () | 2146569..2146703 | - | 135 | WP_001549197.1 | delta-lysin family phenol-soluble modulin | - |
| RM28_RS10115 () | 2146939..2147508 | + | 570 | WP_001105707.1 | accessory gene regulator AgrB | - |
| RM28_RS10120 () | 2147505..2147645 | + | 141 | WP_001093929.1 | cyclic lactone autoinducer peptide | - |
| RM28_RS10125 () | 2147670..2148962 | + | 1293 | WP_001549202.1 | GHKL domain-containing protein | - |
| RM28_RS10130 () | 2148981..2149697 | + | 717 | WP_000688492.1 | LytTR family DNA-binding domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|