MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 71525 bp
Accession: NZ_CP010246 Location: 1..71525 Organism: Yersinia pestis Pestoides G Replicon: plasmid pCD
Accession: NZ_CP010246 Location: 1..71525 Organism: Yersinia pestis Pestoides G Replicon: plasmid pCD
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CH43_RS23550 () | 51..344 | - | 294 | Protein_0 | IS3 family transposase | - |
| CH43_RS00005 () | 503..1051 | - | 549 | WP_002213007.1 | hypothetical protein | VF |
| CH43_RS22165 () | 1551..2518 | + | 968 | Protein_2 | Cysteine protease YopT | VF |
| CH43_RS00020 () | 2518..2916 | + | 399 | WP_002213004.1 | Chaperone protein SycT | VF |
| CH43_RS22170 () | 3322..3603 | + | 282 | Protein_4 | DDE-type integrase/transposase/recombinase | - |
| CH43_RS00030 () | 3621..4040 | + | 420 | WP_002222515.1 | hypothetical protein | - |
| CH43_RS23890 () | 4568..4786 | - | 219 | Protein_6 | IS6 family transposase | - |
| CH43_RS23895 () | 4789..5034 | + | 246 | WP_116442925.1 | transposase | - |
| CH43_RS00035 () | 4916..5233 | + | 318 | Protein_8 | IS256 family transposase ISSod4 | Transposase |
| CH43_RS00040 () | 5276..6505 | - | 1230 | WP_002229779.1 | Outer membrane protein YopM | VF |
| CH43_RS00045 () | 6899..7108 | - | 210 | WP_002229781.1 | hypothetical protein | - |
| CH43_RS23555 () | 7129..7766 | + | 638 | Protein_11 | IS6 family transposase | - |
| CH43_RS00050 () | 7806..9014 | - | 1209 | WP_002209743.1 | IS256 family transposase ISEc39 | Transposase |
| CH43_RS00055 () | 9557..10477 | - | 921 | WP_002212987.1 | Protein YopD | VF |
| CH43_RS00060 () | 10496..11701 | - | 1206 | WP_002212985.1 | Protein YopB | VF |
| CH43_RS00065 () | 11679..12185 | - | 507 | WP_002222758.1 | Chaperone protein IpgC | VF |
| CH43_RS00070 () | 12198..13178 | - | 981 | WP_002212981.1 | Virulence-associated V antigen | VF |
| CH43_RS00075 () | 13180..13467 | - | 288 | WP_002212973.1 | hypothetical protein | VF |
| CH43_RS00080 () | 13509..13949 | - | 441 | WP_002220918.1 | hypothetical protein | VF |
| CH43_RS00085 () | 13946..16060 | - | 2115 | WP_002212971.1 | Invasion protein InvA | VF |
| CH43_RS00090 () | 16047..16391 | - | 345 | WP_002229791.1 | Chaperone protein YscY | VF |
| CH43_RS00095 () | 16388..16756 | - | 369 | WP_002212969.1 | Yop proteins translocation protein X | VF |
| CH43_RS00100 () | 16753..17124 | - | 372 | WP_002229794.1 | Chaperone protein SycN | VF |
| CH43_RS00105 () | 17111..17389 | - | 279 | WP_002212965.1 | Protein TyeA | VF |
| CH43_RS00110 () | 17370..18251 | - | 882 | WP_002212958.1 | Outer membrane protein YopN | VF |
| CH43_RS00115 () | 18449..19768 | + | 1320 | WP_011901825.1 | putative ATP synthase YscN | VF |
| CH43_RS00120 () | 19765..20229 | + | 465 | WP_002212952.1 | Yop proteins translocation protein O | VF |
| CH43_RS00125 () | 20229..21596 | + | 1368 | WP_011901824.1 | hypothetical protein | VF |
| CH43_RS00130 () | 21593..22516 | + | 924 | WP_002212948.1 | Yop proteins translocation protein Q | VF |
| CH43_RS00135 () | 22513..23166 | + | 654 | WP_002212947.1 | Surface presentation of antigens protein SpaP | VF |
| CH43_RS00140 () | 23168..23434 | + | 267 | WP_002212945.1 | hypothetical protein | VF |
| CH43_RS00145 () | 23431..24216 | + | 786 | WP_002212938.1 | Surface presentation of antigens protein SpaR | VF |
| CH43_RS00150 () | 24216..25280 | + | 1065 | WP_011901823.1 | Yop proteins translocation protein U | VF |
| CH43_RS00155 () | 25855..26251 | + | 397 | Protein_33 | Exoenzyme S synthesis protein B | VF |
| CH43_RS00160 () | 26375..27190 | + | 816 | WP_002212931.1 | Virulence regulon transcriptional activator VirF | VF |
| CH43_RS00165 () | 27269..27367 | + | 99 | WP_002229797.1 | type III secretion system protein YscA | - |
| CH43_RS00170 () | 27593..28006 | + | 414 | WP_002212925.1 | Chaperone protein YscB | VF |
| CH43_RS00175 () | 28012..29835 | + | 1824 | WP_002212923.1 | Yop proteins translocation protein C | VF |
| CH43_RS00180 () | 29832..31091 | + | 1260 | WP_002212919.1 | Yop proteins translocation protein D | VF |
| CH43_RS00185 () | 31088..31288 | + | 201 | WP_002212917.1 | Putative Yop proteins translocation protein E | VF |
| CH43_RS00190 () | 31289..31552 | + | 264 | WP_002212916.1 | Yop proteins translocation protein F | VF |
| CH43_RS00195 () | 31554..31901 | + | 348 | WP_011901822.1 | Putative Yop proteins translocation protein G | VF |
| CH43_RS00200 () | 31898..32395 | + | 498 | WP_002212915.1 | Yop proteins translocation protein H | VF |
| CH43_RS00205 () | 32396..32743 | + | 348 | WP_002212914.1 | Yop proteins translocation protein I | VF |
| CH43_RS00210 () | 32750..33484 | + | 735 | WP_002212912.1 | Yop proteins translocation lipoprotein J | VF |
| CH43_RS00215 () | 33484..34113 | + | 630 | WP_002361471.1 | Yop proteins translocation protein K | VF |
| CH43_RS00220 () | 34059..34724 | + | 666 | WP_010981371.1 | Yop proteins translocation protein L | VF |
| CH43_RS00225 () | 34949..35296 | + | 348 | WP_002212907.1 | Yop proteins translocation protein M | VF |
| CH43_RS23905 () | 35844..36705 | + | 862 | Protein_48 | IS3 family transposase | - |
| CH43_RS00245 () | 36829..37851 | + | 1023 | WP_011906282.1 | IS21 family transposase IS100kyp | Transposase |
| CH43_RS00250 () | 37851..38630 | + | 780 | WP_001297096.1 | IS21 family transposase IS100kyp | Transposase |
| CH43_RS00255 () | 38696..38833 | + | 138 | Protein_51 | transposase | - |
| CH43_RS22200 () | 38852..39124 | + | 273 | Protein_52 | transposase | - |
| CH43_RS00260 () | 39345..40751 | - | 1407 | WP_011901819.1 | Tyrosine-protein phosphatase YopH | VF |
| CH43_RS00265 () | 41034..41267 | - | 234 | Protein_54 | transposase domain-containing protein | - |
| CH43_RS00270 () | 41270..41848 | + | 579 | Protein_55 | IS3 family transposase ISYpe1 | Transposase |
| CH43_RS00275 () | 42434..43300 | - | 867 | WP_002213287.1 | Effector protein YopJ | VF |
| CH43_RS00280 () | 43696..45894 | - | 2199 | WP_002213290.1 | Protein kinase YpkA | VF |
| CH43_RS00285 () | 45912..46340 | - | 429 | WP_002233145.1 | hypothetical protein | VF |
| CH43_RS23560 () | 46596..46908 | - | 313 | Protein_59 | IS3 family transposase ISKpn37 | Transposase |
| CH43_RS22215 () | 47086..47325 | - | 240 | WP_002213291.1 | hypothetical protein | - |
| CH43_RS00295 () | 48498..49376 | - | 879 | WP_002213292.1 | incFII family plasmid replication initiator RepA | - |
| CH43_RS00300 () | 49357..49431 | - | 75 | WP_002233140.1 | RepA leader peptide Tap | - |
| CH43_RS00305 () | 49673..49927 | - | 255 | WP_002229817.1 | replication regulatory protein RepA | - |
| CH43_RS00310 () | 50065..50313 | - | 249 | WP_002233137.1 | Phospholipase D | VF |
| CH43_RS22225 () | 50439..50747 | + | 309 | Protein_65 | DDE-type integrase/transposase/recombinase | - |
| CH43_RS23915 () | 50730..51137 | - | 408 | WP_002213294.1 | IS3 family transposase ISKpn37 | Transposase |
| CH43_RS00320 () | 51161..51478 | - | 318 | WP_002213008.1 | IS3 family transposase ISKpn37 | Transposase |
| CH43_RS00325 () | 51650..52108 | - | 459 | WP_002213246.1 | hypothetical protein | - |
| CH43_RS00330 () | 52177..52446 | + | 270 | WP_042469136.1 | transposase | - |
| CH43_RS24590 () | 52544..52702 | - | 159 | Protein_70 | EamA family transporter | - |
| CH43_RS22235 () | 52772..54075 | - | 1304 | Protein_71 | Adhesin YadA | VF |
| CH43_RS00350 () | 54675..55025 | + | 351 | Protein_72 | IS3 family transposase IS1351 | Transposase |
| CH43_RS00355 () | 55058..57373 | - | 2316 | WP_011901828.1 | Tn3 family transposase ISEc63 | Transposase |
| CH43_RS00360 () | 57537..58088 | + | 552 | WP_002213258.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| CH43_RS00365 () | 58107..58571 | + | 465 | WP_002224338.1 | hypothetical protein | - |
| CH43_RS00370 () | 58710..59039 | + | 330 | WP_002229829.1 | hypothetical protein | - |
| CH43_RS00380 () | 59139..60238 | + | 1100 | WP_086016640.1 | IS3 family transposase ISYpe1 | Transposase |
| CH43_RS00385 () | 60386..60811 | - | 426 | WP_002213267.1 | hypothetical protein | VF |
| CH43_RS00390 () | 61188..61586 | - | 399 | Protein_79 | IS21 family transposase IS21 | Transposase |
| CH43_RS00395 () | 61586..62758 | - | 1173 | WP_002220893.1 | IS21 family transposase IS21 | Transposase |
| CH43_RS00405 () | 62861..63505 | + | 645 | Protein_81 | IS3 family transposase ISYen3 | Transposase |
| CH43_RS00410 () | 63568..63960 | - | 393 | WP_002213403.1 | YopE regulator | VF |
| CH43_RS00415 () | 64154..64813 | + | 660 | WP_002229754.1 | Outer membrane virulence protein YopE | VF |
| CH43_RS00420 () | 64953..65252 | - | 300 | WP_002213360.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| CH43_RS00425 () | 65245..65487 | - | 243 | WP_002224342.1 | type II toxin-antitoxin system ParD family antitoxin | Antitoxin Detail |
| CH43_RS23570 () | 65653..65945 | - | 293 | Protein_86 | IS6 family transposase ISEas1 | Transposase |
| CH43_RS24595 () | 66033..66206 | + | 174 | WP_002213357.1 | hypothetical protein | - |
| CH43_RS00430 () | 66661..67626 | - | 966 | WP_002213354.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| CH43_RS00435 () | 67623..68789 | - | 1167 | WP_002220902.1 | Sporulation initiation inhibitor protein Soj | VF |
| CH43_RS23925 () | 69549..70694 | - | 1146 | Protein_90 | IS3 family transposase | - |
| CH43_RS00455 () | 70801..71430 | - | 630 | WP_002229770.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|