MGE detailed information
MGE type: Genomic_island MGE length: 16092 bp
Accession: NZ_CP010235 Location: 2523049..2539140 Organism: Escherichia coli strain S40 Replicon: chromosome
Accession: NZ_CP010235 Location: 2523049..2539140 Organism: Escherichia coli strain S40 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RG69_RS13165 () | 2523049..2523315 | + | 267 | WP_001296726.1 | type II toxin-antitoxin system antitoxin HipB | Antitoxin Detail |
| RG69_RS13170 () | 2523315..2524637 | + | 1323 | WP_001125463.1 | type II toxin-antitoxin system serine/threonine protein kinase toxin HipA | Toxin Detail |
| RG69_RS13180 () | 2524949..2525157 | + | 209 | Protein_2395 | helix-turn-helix transcriptional regulator | - |
| RG69_RS13185 () | 2525591..2526154 | + | 564 | WP_001296758.1 | Type-1 fimbrial protein, A chain | VF |
| RG69_RS13190 () | 2526515..2527225 | + | 711 | WP_001195166.1 | Chaperone protein FocC | VF |
| RG69_RS13195 () | 2527267..2529918 | + | 2652 | WP_001307216.1 | Outer membrane usher protein FimD | VF |
| RG69_RS13200 () | 2529932..2530462 | + | 531 | WP_000876763.1 | Protein FimF | VF |
| RG69_RS13205 () | 2530475..2530978 | + | 504 | WP_000825458.1 | Protein FimG | VF |
| RG69_RS13210 () | 2531038..2531952 | + | 915 | WP_000520674.1 | Type 1 fimbrin D-mannose specific adhesin | VF |
| RG69_RS13215 () | 2532286..2534565 | + | 2280 | WP_000726676.1 | acid resistance putative oxidoreductase YdeP | - |
| RG69_RS13220 () | 2534813..2535010 | + | 198 | WP_000543394.1 | two-component system connector SafA | - |
| RG69_RS13225 () | 2535084..2535845 | + | 762 | WP_000060489.1 | acid stress response transcriptional regulator YdeO | - |
| RG69_RS13230 () | 2536249..2537931 | + | 1683 | WP_001295684.1 | sulfatase | - |
| RG69_RS13235 () | 2537983..2539140 | + | 1158 | WP_001299007.1 | anaerobic sulfatase maturase | - |
| RG69_RS28795 () | 2539106..2539228 | - | 123 | WP_120795387.1 | protein YneP | - |
| RG69_RS13240 () | 2539431..2541116 | + | 1686 | WP_000628543.1 | ABC transporter ATP-binding protein/permease | - |
| RG69_RS13245 () | 2541154..2543526 | + | 2373 | WP_000832442.1 | TonB-dependent receptor plug domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|