MGE detailed information
MGE type: Prophage MGE length: 54533 bp
Accession: NZ_CP010219 Location: 3401473..3456005 Organism: Escherichia coli strain M18 Replicon: chromosome
Accession: NZ_CP010219 Location: 3401473..3456005 Organism: Escherichia coli strain M18 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RG62_RS17685 () | 3397116..3398198 | + | 1083 | WP_001295681.1 | LPS export ABC transporter permease LptG | - |
| RG62_RS17690 () | 3398317..3399819 | - | 1503 | WP_001294544.1 | DUF853 domain-containing protein | - |
| RG62_RS17695 () | 3399949..3400968 | - | 1020 | WP_046201568.1 | NADPH-dependent aldehyde reductase Ahr | - |
| RG62_RS17705 () | 3401473..3403854 | - | 2382 | Protein_3189 | type I restriction endonuclease subunit R | - |
| RG62_RS17710 () | 3403984..3404721 | - | 738 | WP_073527700.1 | protein mom | - |
| RG62_RS17715 () | 3404675..3404875 | - | 201 | WP_001443803.1 | Com family DNA-binding transcriptional regulator | - |
| RG62_RS27975 () | 3405400..3405492 | - | 93 | WP_157908173.1 | hypothetical protein | - |
| RG62_RS17725 () | 3405923..3406177 | - | 255 | WP_073527702.1 | DUF826 domain-containing protein | - |
| RG62_RS17730 () | 3406213..3406395 | - | 183 | WP_073527703.1 | DUF1378 family protein | - |
| RG62_RS17735 () | 3406539..3408608 | - | 2070 | WP_073527704.1 | sialate O-acetylesterase | - |
| RG62_RS17740 () | 3408913..3409434 | + | 522 | WP_073527792.1 | tail fiber assembly protein | - |
| RG62_RS17745 () | 3409466..3410347 | - | 882 | WP_073527705.1 | phage tail protein | - |
| RG62_RS17750 () | 3410347..3410907 | - | 561 | WP_073527706.1 | YmfQ family protein | - |
| RG62_RS17755 () | 3410898..3411980 | - | 1083 | WP_001146843.1 | baseplate J/gp47 family protein | - |
| RG62_RS17760 () | 3411980..3412417 | - | 438 | WP_073527707.1 | phage GP46 family protein | - |
| RG62_RS17765 () | 3412410..3413024 | - | 615 | WP_073527708.1 | phage baseplate assembly protein V | - |
| RG62_RS17770 () | 3413014..3414141 | - | 1128 | WP_073527709.1 | phage tail protein | - |
| RG62_RS17775 () | 3414125..3415483 | - | 1359 | WP_073527710.1 | DNA circularization protein | - |
| RG62_RS17780 () | 3415470..3417527 | - | 2058 | WP_073527711.1 | tape measure protein | - |
| RG62_RS17785 () | 3417655..3418131 | - | 477 | WP_073527712.1 | phage tail assembly protein | - |
| RG62_RS17790 () | 3418146..3418511 | - | 366 | WP_046201616.1 | phage tail tube protein | - |
| RG62_RS17795 () | 3418520..3420001 | - | 1482 | WP_012908606.1 | phage tail sheath subtilisin-like domain-containing protein | - |
| RG62_RS17800 () | 3420001..3420279 | - | 279 | WP_000207438.1 | DUF2635 domain-containing protein | - |
| RG62_RS17805 () | 3420283..3420846 | - | 564 | WP_073527713.1 | DUF1834 family protein | - |
| RG62_RS17810 () | 3420843..3421262 | - | 420 | WP_073527714.1 | gp436 family protein | - |
| RG62_RS17815 () | 3421259..3421612 | - | 354 | WP_073527715.1 | hypothetical protein | - |
| RG62_RS17820 () | 3421656..3422603 | - | 948 | WP_012908603.1 | Mu-like prophage major head subunit gpT family protein | - |
| RG62_RS17825 () | 3422603..3423727 | - | 1125 | WP_032189117.1 | protease | - |
| RG62_RS17830 () | 3423905..3424378 | - | 474 | WP_000094810.1 | phage virion morphogenesis protein | - |
| RG62_RS17835 () | 3424500..3425831 | - | 1332 | WP_073527716.1 | minor capsid protein | - |
| RG62_RS17840 () | 3425815..3427404 | - | 1590 | WP_073527793.1 | DUF935 domain-containing protein | - |
| RG62_RS17845 () | 3427404..3429068 | - | 1665 | WP_073527717.1 | hypothetical protein | - |
| RG62_RS17850 () | 3429068..3429316 | - | 249 | WP_073527718.1 | hypothetical protein | - |
| RG62_RS17855 () | 3429327..3429908 | - | 582 | WP_000360580.1 | DUF3486 family protein | - |
| RG62_RS17860 () | 3429911..3430201 | - | 291 | WP_001279080.1 | hypothetical protein | - |
| RG62_RS17865 () | 3430194..3430505 | - | 312 | WP_000270160.1 | DUF2730 family protein | - |
| RG62_RS17870 () | 3430486..3430713 | - | 228 | WP_073527719.1 | TraR/DksA family transcriptional regulator | - |
| RG62_RS27985 () | 3430724..3430942 | - | 219 | WP_005136374.1 | hypothetical protein | - |
| RG62_RS27990 () | 3430926..3431294 | - | 369 | WP_149025836.1 | hypothetical protein | - |
| RG62_RS17880 () | 3431389..3431889 | - | 501 | WP_053264793.1 | lysozyme | - |
| RG62_RS17890 () | 3431961..3432383 | - | 423 | WP_000852372.1 | transcriptional regulator | - |
| RG62_RS17895 () | 3432454..3432963 | - | 510 | WP_073527721.1 | gp16 family protein | - |
| RG62_RS17900 () | 3432960..3433256 | - | 297 | WP_073527722.1 | hypothetical protein | - |
| RG62_RS17910 () | 3433272..3433640 | - | 369 | WP_073527723.1 | hypothetical protein | - |
| RG62_RS17915 () | 3433637..3433966 | - | 330 | WP_073527724.1 | hypothetical protein | - |
| RG62_RS17920 () | 3433963..3434514 | - | 552 | WP_073527725.1 | SANT/Myb domain-containing protein | - |
| RG62_RS17925 () | 3434518..3435033 | - | 516 | WP_073527726.1 | hypothetical protein | - |
| RG62_RS17930 () | 3435033..3435566 | - | 534 | WP_000564274.1 | hypothetical protein | - |
| RG62_RS17935 () | 3435570..3436112 | - | 543 | WP_073527727.1 | hypothetical protein | - |
| RG62_RS17940 () | 3436210..3436740 | - | 531 | WP_001129558.1 | host-nuclease inhibitor Gam family protein | - |
| RG62_RS17945 () | 3436752..3437045 | - | 294 | WP_073527728.1 | hypothetical protein | - |
| RG62_RS17950 () | 3437050..3437322 | - | 273 | WP_000049428.1 | hypothetical protein | - |
| RG62_RS17955 () | 3437397..3437627 | - | 231 | WP_001536811.1 | hypothetical protein | - |
| RG62_RS17960 () | 3437614..3438036 | - | 423 | WP_073527729.1 | hypothetical protein | - |
| RG62_RS17965 () | 3438049..3438270 | - | 222 | WP_073527730.1 | hypothetical protein | - |
| RG62_RS17970 () | 3438273..3439205 | - | 933 | WP_073527731.1 | AAA family ATPase | - |
| RG62_RS17975 () | 3439281..3441368 | - | 2088 | WP_073527732.1 | IS3 family transposase ISCc3 | Transposase |
| RG62_RS17980 () | 3441371..3441601 | - | 231 | WP_001575658.1 | helix-turn-helix domain-containing protein | - |
| RG62_RS17985 () | 3441778..3442332 | + | 555 | WP_073520715.1 | hypothetical protein | - |
| RG62_RS17990 () | 3442601..3443341 | - | 741 | Protein_3245 | type I restriction endonuclease subunit R | - |
| RG62_RS17995 () | 3443463..3444629 | - | 1167 | WP_001293040.1 | restriction endonuclease subunit S | - |
| RG62_RS18000 () | 3444626..3446182 | - | 1557 | WP_000202816.1 | type I restriction-modification system subunit M | - |
| RG62_RS18005 () | 3446488..3447321 | + | 834 | WP_001192741.1 | DUF4942 domain-containing protein | - |
| RG62_RS18010 () | 3447391..3447786 | + | 396 | WP_000152739.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | Antitoxin Detail |
| RG62_RS18015 () | 3447779..3448726 | + | 948 | WP_000342497.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| RG62_RS28640 () | 3448764..3448949 | - | 186 | WP_000066585.1 | hypothetical protein | - |
| RG62_RS18030 () | 3449328..3449978 | + | 651 | WP_001037970.1 | HNH endonuclease | - |
| RG62_RS18035 () | 3449986..3450966 | - | 981 | WP_001366032.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| RG62_RS18040 () | 3451031..3452137 | - | 1107 | WP_073527734.1 | N-acetylneuraminate epimerase | - |
| RG62_RS18045 () | 3452157..3452873 | - | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| RG62_RS18055 () | 3454329..3454931 | + | 603 | WP_000790583.1 | Tyrosine recombinase XerC | VF |
| RG62_RS18060 () | 3455409..3456005 | + | 597 | WP_000044711.1 | Tyrosine recombinase XerC | VF |
| RG62_RS18070 () | 3456486..3457034 | + | 549 | WP_000695561.1 | type 1 fimbrial major subunit FimA | - |
| RG62_RS18075 () | 3457099..3457638 | + | 540 | WP_000824114.1 | type 1 fimbrial protein | - |
| RG62_RS18080 () | 3457675..3458400 | + | 726 | WP_000066557.1 | type 1 fimbria chaperone FimC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|