MGE detailed information
MGE type: Genomic_island MGE length: 32438 bp
Accession: NZ_CP010219 Location: 3232463..3264900 Organism: Escherichia coli strain M18 Replicon: chromosome
Accession: NZ_CP010219 Location: 3232463..3264900 Organism: Escherichia coli strain M18 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RG62_RS16845 () | 3227645..3228985 | - | 1341 | WP_000899522.1 | anaerobic C4-dicarboxylate transporter DcuB | - |
| RG62_RS16855 () | 3229556..3230275 | - | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
| RG62_RS16860 () | 3230272..3231903 | - | 1632 | WP_001216489.1 | sensor histidine kinase | - |
| RG62_RS27950 () | 3232032..3232783 | - | 752 | Protein_3032 | IS3 family transposase | - |
| RG62_RS16875 () | 3233186..3233758 | + | 573 | WP_000661408.1 | hypothetical protein | - |
| RG62_RS16880 () | 3233797..3235017 | + | 1221 | WP_001150579.1 | HlyD family efflux transporter periplasmic adaptor subunit | - |
| RG62_RS16885 () | 3235010..3237172 | + | 2163 | WP_001395681.1 | peptidase domain-containing ABC transporter | - |
| RG62_RS16890 () | 3237224..3237454 | - | 231 | WP_089562688.1 | IS3 family transposase | - |
| RG62_RS27955 () | 3237914..3238030 | - | 117 | Protein_3037 | IS3 family transposase ISKpn1 | Transposase |
| RG62_RS16900 () | 3238110..3238628 | - | 519 | WP_000565927.1 | hypothetical protein | - |
| RG62_RS16905 () | 3238621..3239058 | - | 438 | WP_100224274.1 | hypothetical protein | VF |
| RG62_RS16910 () | 3239156..3240151 | - | 996 | WP_001395679.1 | hypothetical protein | - |
| RG62_RS16915 () | 3240171..3240872 | - | 702 | WP_000162908.1 | hypothetical protein | VF |
| RG62_RS16920 () | 3240865..3243222 | - | 2358 | WP_000695774.1 | hypothetical protein | VF |
| RG62_RS16925 () | 3243291..3243824 | - | 534 | WP_000733565.1 | hypothetical protein | VF |
| RG62_RS16930 () | 3244174..3248010 | + | 3837 | WP_001033999.1 | hypothetical protein | VF |
| RG62_RS16935 () | 3248917..3249747 | + | 831 | WP_001088100.1 | AraC family transcriptional regulator | - |
| RG62_RS16940 () | 3250908..3254837 | + | 3930 | WP_046201569.1 | hypothetical protein | VF |
| RG62_RS16945 () | 3255050..3255322 | + | 273 | WP_000405647.1 | N-acetyltransferase | - |
| RG62_RS16955 () | 3255549..3255845 | + | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| RG62_RS16960 () | 3255873..3256046 | + | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| RG62_RS16965 () | 3256165..3257682 | - | 1518 | WP_001295087.1 | lysine--tRNA ligase | - |
| RG62_RS16970 () | 3257919..3259376 | - | 1458 | WP_000856829.1 | dipeptide/tripeptide permease DtpC | - |
| RG62_RS16975 () | 3259435..3261582 | - | 2148 | WP_001100642.1 | lysine decarboxylase CadA | - |
| RG62_RS16980 () | 3261662..3262996 | - | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| RG62_RS16990 () | 3263362..3264900 | - | 1539 | WP_001187170.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| RG62_RS17005 () | 3265699..3266274 | - | 576 | WP_001188520.1 | transcriptional regulator | - |
| RG62_RS17010 () | 3266311..3268008 | - | 1698 | WP_000068978.1 | protein-disulfide reductase DsbD | - |
| RG62_RS17015 () | 3267984..3268322 | - | 339 | WP_000883400.1 | divalent cation tolerance protein CutA | - |
| RG62_RS17020 () | 3268440..3269741 | - | 1302 | WP_000961959.1 | anaerobic C4-dicarboxylate transporter DcuA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|