MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 123015 bp
Accession: NZ_CP010196 Location: 3180449..3303463 Organism: Escherichia coli strain M9 Replicon: chromosome
Accession: NZ_CP010196 Location: 3180449..3303463 Organism: Escherichia coli strain M9 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RG58_RS16590 () | 3175654..3176886 | - | 1233 | WP_073519477.1 | phosphoadenosine phosphosulfate reductase | - |
| RG58_RS16595 () | 3177388..3180069 | - | 2682 | WP_187655888.1 | DUF2726 domain-containing protein | - |
| RG58_RS16600 () | 3180310..3180489 | - | 180 | Protein_3019 | type VI secretion protein ImpA | - |
| RG58_RS16615 () | 3181841..3182395 | - | 555 | Protein_3021 | hypothetical protein | VF |
| RG58_RS16625 () | 3182821..3184566 | - | 1746 | WP_123006585.1 | NERD domain-containing protein | - |
| RG58_RS16630 () | 3184744..3185319 | - | 576 | WP_157902009.1 | hypothetical protein | VF |
| RG58_RS29200 () | 3185863..3186459 | - | 597 | WP_187655889.1 | hypothetical protein | - |
| RG58_RS16645 () | 3186574..3186909 | - | 336 | WP_073519473.1 | DUF596 domain-containing protein | - |
| RG58_RS16650 () | 3186913..3195948 | - | 9036 | WP_073519472.1 | hypothetical protein | VF |
| RG58_RS16655 () | 3195964..3196491 | - | 528 | WP_073519471.1 | hypothetical protein | VF |
| RG58_RS16660 () | 3196501..3198153 | - | 1653 | WP_073519850.1 | ShlB/FhaC/HecB family hemolysin secretion/activation protein | - |
| RG58_RS16665 () | 3198793..3198999 | + | 207 | WP_073519470.1 | DUF4222 domain-containing protein | - |
| RG58_RS16670 () | 3199052..3199285 | - | 234 | WP_012908817.1 | hypothetical protein | - |
| RG58_RS16675 () | 3199381..3200004 | - | 624 | WP_012908816.1 | hypothetical protein | - |
| RG58_RS16685 () | 3200312..3200725 | - | 414 | WP_073519469.1 | hypothetical protein | - |
| RG58_RS16690 () | 3200722..3201105 | - | 384 | WP_024133111.1 | hypothetical protein | - |
| RG58_RS16695 () | 3201366..3201935 | - | 570 | WP_073519468.1 | inovirus Gp2 family protein | - |
| RG58_RS16710 () | 3202586..3202798 | - | 213 | WP_012908811.1 | hemolysin expression modulator Hha | - |
| RG58_RS16720 () | 3203499..3203705 | + | 207 | WP_001095912.1 | AlpA family transcriptional regulator | - |
| RG58_RS16725 () | 3203791..3204363 | + | 573 | WP_021564615.1 | hypothetical protein | - |
| RG58_RS28760 () | 3204572..3204673 | + | 102 | Protein_3038 | IS1 family transposase | - |
| RG58_RS16745 () | 3205859..3206878 | + | 1020 | WP_073519467.1 | transcriptional regulator | - |
| RG58_RS16750 () | 3206988..3207860 | + | 873 | WP_073528033.1 | GTPase family protein | - |
| RG58_RS16755 () | 3208232..3211078 | + | 2847 | WP_073527990.1 | Ag43/Cah family autotransporter adhesin | - |
| RG58_RS16760 () | 3211405..3212223 | + | 819 | WP_061892566.1 | DUF945 domain-containing protein | - |
| RG58_RS16770 () | 3212540..3213019 | + | 480 | WP_061892567.1 | antirestriction protein | - |
| RG58_RS16775 () | 3213035..3213511 | + | 477 | WP_041124171.1 | RadC family protein | - |
| RG58_RS16780 () | 3213574..3213795 | + | 222 | WP_000692323.1 | DUF987 domain-containing protein | - |
| RG58_RS16785 () | 3213814..3214458 | + | 645 | WP_073519465.1 | antitoxin of toxin-antitoxin stability system | - |
| RG58_RS16790 () | 3214508..3214876 | + | 369 | WP_012908802.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| RG58_RS16795 () | 3214965..3215342 | + | 378 | WP_073519464.1 | TA system toxin CbtA family protein | Toxin Detail |
| RG58_RS28770 () | 3215339..3215509 | + | 171 | Protein_3049 | hypothetical protein | - |
| RG58_RS28775 () | 3215564..3215761 | + | 198 | WP_089560254.1 | DUF957 domain-containing protein | - |
| RG58_RS16805 () | 3215846..3216406 | + | 561 | Protein_3051 | DUF4942 domain-containing protein | - |
| RG58_RS16810 () | 3216774..3217310 | - | 537 | WP_000942795.1 | hypothetical protein | VF |
| RG58_RS16815 () | 3217312..3218490 | - | 1179 | WP_000094962.1 | hypothetical protein | VF |
| RG58_RS16820 () | 3218487..3219464 | - | 978 | WP_000633238.1 | hypothetical protein | VF |
| RG58_RS16825 () | 3219467..3220066 | - | 600 | WP_001255040.1 | hypothetical protein | VF |
| RG58_RS16830 () | 3220063..3220434 | - | 372 | WP_000820125.1 | hypothetical protein | VF |
| RG58_RS16835 () | 3220431..3220994 | - | 564 | WP_001115140.1 | hypothetical protein | VF |
| RG58_RS16840 () | 3220998..3221453 | - | 456 | WP_001087296.1 | hypothetical protein | VF |
| RG58_RS16845 () | 3221470..3222693 | - | 1224 | WP_001173453.1 | hypothetical protein | VF |
| RG58_RS16850 () | 3222693..3224186 | - | 1494 | WP_000249348.1 | hypothetical protein | VF |
| RG58_RS16855 () | 3224186..3226246 | - | 2061 | WP_000498824.1 | hypothetical protein | VF |
| RG58_RS16860 () | 3226276..3227235 | - | 960 | WP_000135067.1 | hypothetical protein | VF |
| RG58_RS16865 () | 3227253..3227663 | - | 411 | WP_001324279.1 | type II secretion system pilot lipoprotein GspS-beta | - |
| RG58_RS16870 () | 3227729..3228538 | - | 810 | WP_001365924.1 | hypothetical protein | VF |
| RG58_RS16875 () | 3228678..3233246 | - | 4569 | WP_077897953.1 | hypothetical protein | VF |
| RG58_RS16890 () | 3233732..3235414 | - | 1683 | WP_000259303.1 | glycolate permease GlcA | - |
| RG58_RS16895 () | 3235770..3237941 | - | 2172 | WP_000084066.1 | malate synthase G | - |
| RG58_RS16900 () | 3237963..3238367 | - | 405 | WP_000853256.1 | protein GlcG | - |
| RG58_RS16905 () | 3238372..3239595 | - | 1224 | WP_001194682.1 | glycolate oxidase subunit GlcF | - |
| RG58_RS16910 () | 3239606..3240658 | - | 1053 | WP_000943059.1 | glycolate oxidase subunit GlcE | - |
| RG58_RS16915 () | 3240658..3242157 | - | 1500 | WP_000026117.1 | glycolate oxidase subunit GlcD | - |
| RG58_RS16920 () | 3242408..3243172 | + | 765 | WP_001297764.1 | transcriptional regulator GlcC | - |
| RG58_RS16925 () | 3243179..3244321 | - | 1143 | WP_000388786.1 | DNA-binding protein | - |
| RG58_RS16935 () | 3244692..3246413 | + | 1722 | WP_012565169.1 | 2-succinylbenzoate--CoA ligase | VF |
| RG58_RS16940 () | 3246410..3247324 | + | 915 | WP_001077143.1 | NAD-dependent epimerase/dehydratase family protein | - |
| RG58_RS16945 () | 3247356..3247604 | + | 249 | WP_000248097.1 | acyl carrier protein | - |
| RG58_RS16950 () | 3247604..3248776 | + | 1173 | WP_000524972.1 | 8-amino-7-oxononanoate synthase | VF |
| RG58_RS16955 () | 3248812..3249891 | - | 1080 | WP_073519459.1 | LPS export ABC transporter permease LptG | - |
| RG58_RS16960 () | 3249888..3250958 | - | 1071 | WP_000779661.1 | LPS export ABC transporter permease LptF | - |
| RG58_RS16965 () | 3250989..3251549 | - | 561 | WP_001299422.1 | YtfJ family protein | - |
| RG58_RS16970 () | 3251561..3252385 | - | 825 | WP_000984977.1 | hypothetical protein | - |
| RG58_RS16975 () | 3252385..3253734 | - | 1350 | WP_073519458.1 | lipopolysaccharide biosynthesis protein | - |
| RG58_RS16980 () | 3253780..3254538 | - | 759 | WP_000339512.1 | hypothetical protein | - |
| RG58_RS16985 () | 3254570..3255283 | - | 714 | WP_001076220.1 | thymidylate kinase | - |
| RG58_RS16990 () | 3255457..3256149 | + | 693 | WP_001190773.1 | thymidylate kinase | - |
| RG58_RS16995 () | 3256203..3257702 | - | 1500 | WP_000933296.1 | inorganic phosphate transporter PitB | - |
| RG58_RS17000 () | 3257994..3259853 | - | 1860 | WP_001297309.1 | bifunctional glutathionylspermidine amidase/synthase | - |
| RG58_RS17005 () | 3260058..3260924 | + | 867 | WP_001298746.1 | glutathione-dependent disulfide-bond oxidoreductase | - |
| RG58_RS17015 () | 3261224..3262204 | + | 981 | WP_000399648.1 | IS110 family transposase IS621 | Transposase |
| RG58_RS17020 () | 3262326..3262574 | - | 249 | WP_000334896.1 | hydrogenase maturation factor HybG | - |
| RG58_RS17025 () | 3262587..3262928 | - | 342 | WP_000544953.1 | hydrogenase maturation nickel metallochaperone HypA | - |
| RG58_RS17030 () | 3262921..3263409 | - | 489 | WP_000134014.1 | hydrogenase-2 assembly chaperone | - |
| RG58_RS17035 () | 3263402..3263896 | - | 495 | WP_001221953.1 | HyaD/HybD family hydrogenase maturation endopeptidase | - |
| RG58_RS17040 () | 3263896..3265599 | - | 1704 | WP_000083065.1 | hydrogenase 2 large subunit | - |
| RG58_RS17045 () | 3265596..3266774 | - | 1179 | WP_000017703.1 | Ni/Fe-hydrogenase cytochrome b subunit | - |
| RG58_RS17050 () | 3266764..3267750 | - | 987 | WP_001081870.1 | hydrogenase 2 operon protein HybA | - |
| RG58_RS17055 () | 3267753..3268871 | - | 1119 | WP_000145410.1 | hydrogenase 2 small subunit | - |
| RG58_RS17065 () | 3269060..3269347 | - | 288 | WP_001059136.1 | DUF2623 domain-containing protein | - |
| RG58_RS17070 () | 3269466..3270353 | - | 888 | WP_001297303.1 | dienelactone hydrolase family protein | - |
| RG58_RS17075 () | 3270510..3271550 | + | 1041 | WP_000262150.1 | L-glyceraldehyde 3-phosphate reductase | - |
| RG58_RS17080 () | 3271590..3272084 | - | 495 | WP_000439331.1 | TIGR00645 family protein | - |
| RG58_RS17085 () | 3272275..3273159 | + | 885 | WP_000018760.1 | 3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase | VF |
| RG58_RS17095 () | 3273431..3273856 | - | 426 | WP_001240712.1 | TonB system transport protein ExbD | - |
| RG58_RS17100 () | 3273863..3274597 | - | 735 | WP_000527844.1 | tol-pal system-associated acyl-CoA thioesterase | - |
| RG58_RS17110 () | 3274848..3276035 | + | 1188 | WP_000763933.1 | cystathionine beta-lyase | - |
| RG58_RS17115 () | 3276175..3276834 | + | 660 | WP_000268419.1 | DedA family protein | - |
| RG58_RS17120 () | 3276874..3277773 | - | 900 | WP_000817717.1 | DNA-binding transcriptional regulator YqhC | - |
| RG58_RS17130 () | 3277967..3279130 | + | 1164 | WP_001058807.1 | alcohol dehydrogenase | - |
| RG58_RS17135 () | 3279235..3280062 | + | 828 | WP_000013149.1 | 2,5-didehydrogluconate reductase DkgA | - |
| RG58_RS17140 () | 3280262..3281188 | + | 927 | WP_000691598.1 | YbjP/YqhG family protein | - |
| RG58_RS17145 () | 3281239..3281496 | + | 258 | WP_000848528.1 | lipoprotein YqhH | - |
| RG58_RS17150 () | 3281539..3283758 | - | 2220 | WP_000095187.1 | YgiQ family radical SAM protein | - |
| RG58_RS17155 () | 3283869..3285281 | - | 1413 | WP_000059395.1 | cell division protein FtsP | - |
| RG58_RS17160 () | 3285356..3286093 | - | 738 | WP_000965712.1 | 1-acylglycerol-3-phosphate O-acyltransferase | - |
| RG58_RS17170 () | 3286327..3288585 | - | 2259 | WP_001281881.1 | DNA topoisomerase IV subunit A | - |
| RG58_RS17180 () | 3289131..3289613 | - | 483 | WP_000183494.1 | transcriptional regulator | - |
| RG58_RS17185 () | 3289666..3290058 | - | 393 | WP_000712658.1 | OB fold stress tolerance protein YgiW | - |
| RG58_RS17190 () | 3290210..3290869 | + | 660 | WP_001221502.1 | Regulator of RpoS | VF |
| RG58_RS17195 () | 3290866..3292215 | + | 1350 | WP_000673354.1 | two-component system sensor histidine kinase QseC | - |
| RG58_RS17200 () | 3292261..3292593 | - | 333 | WP_000912120.1 | DUF2645 family protein | - |
| RG58_RS17205 () | 3292912..3293493 | + | 582 | WP_000065430.1 | NADPH:quinone oxidoreductase MdaB | - |
| RG58_RS17210 () | 3293524..3293838 | + | 315 | WP_000958598.1 | antibiotic biosynthesis monooxygenase | - |
| RG58_RS17215 () | 3293886..3295778 | - | 1893 | WP_000195296.1 | DNA topoisomerase IV subunit B | - |
| RG58_RS17220 () | 3295807..3296388 | - | 582 | WP_000105733.1 | esterase YqiA | - |
| RG58_RS17225 () | 3296388..3297215 | - | 828 | WP_000444747.1 | 3',5'-cyclic-AMP phosphodiesterase | - |
| RG58_RS17230 () | 3297240..3297662 | - | 423 | WP_000833393.1 | DUF1249 family protein | - |
| RG58_RS17235 () | 3297663..3298292 | - | 630 | WP_000917117.1 | ADP-ribose diphosphatase | - |
| RG58_RS17240 () | 3298497..3299978 | + | 1482 | WP_000735278.1 | outer membrane channel protein TolC | - |
| RG58_RS17250 () | 3300126..3300797 | + | 672 | WP_000831543.1 | DUF1190 family protein | - |
| RG58_RS17255 () | 3300803..3301963 | + | 1161 | WP_000442860.1 | glutathionylspermidine synthase family protein | - |
| RG58_RS17260 () | 3302001..3302789 | - | 789 | WP_001299419.1 | 4,5-DOPA dioxygenase extradiol | - |
| RG58_RS17265 () | 3302932..3303705 | + | 774 | WP_073519457.1 | zinc transporter ZupT | - |
| RG58_RS29205 () | 3303763..3303933 | - | 171 | WP_000469266.1 | hypothetical protein | - |
| RG58_RS17275 () | 3304194..3304847 | - | 654 | WP_001076997.1 | 3,4-dihydroxy-2-butanone-4-phosphate synthase | - |
| RG58_RS17280 () | 3305221..3305511 | + | 291 | WP_001297598.1 | ubiquinone biosynthesis accessory factor UbiK | - |
| RG58_RS17285 () | 3305794..3306345 | + | 552 | WP_001272149.1 | fimbrial-like protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|