MGE detailed information
MGE type: Genomic_island MGE length: 12728 bp
Accession: NZ_CP010178 Location: 3108597..3121324 Organism: Escherichia coli strain H15 Replicon: chromosome
Accession: NZ_CP010178 Location: 3108597..3121324 Organism: Escherichia coli strain H15 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RG53_RS16070 () | 3104922..3106130 | - | 1209 | WP_001297162.1 | propionate kinase | - |
| RG53_RS16075 () | 3106156..3107487 | - | 1332 | WP_000107720.1 | threonine/serine transporter TdcC | - |
| RG53_RS16080 () | 3107509..3108498 | - | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| RG53_RS16085 () | 3108597..3109535 | - | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| RG53_RS26275 () | 3109850..3110068 | + | 219 | WP_001390702.1 | transcriptional activator TdcR | - |
| RG53_RS16095 () | 3110324..3110863 | + | 540 | WP_000675746.1 | hypothetical protein | - |
| RG53_RS16100 () | 3110885..3112072 | + | 1188 | WP_027661808.1 | YhaC family protein | - |
| RG53_RS16105 () | 3112410..3113390 | + | 981 | WP_000399648.1 | IS110 family transposase IS621 | Transposase |
| RG53_RS16120 () | 3114148..3115293 | - | 1146 | WP_001299416.1 | glycerate 2-kinase | - |
| RG53_RS16125 () | 3115390..3116280 | - | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| RG53_RS16130 () | 3116310..3117080 | - | 771 | WP_001058227.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| RG53_RS16135 () | 3117096..3118430 | - | 1335 | WP_000599636.1 | galactarate/glucarate/glycerate transporter GarP | - |
| RG53_RS16140 () | 3118805..3120376 | + | 1572 | WP_001273741.1 | galactarate dehydratase | - |
| RG53_RS16145 () | 3120525..3120860 | + | 336 | WP_001307405.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| RG53_RS16150 () | 3120860..3121324 | + | 465 | WP_000347267.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| RG53_RS16155 () | 3121379..3122188 | - | 810 | WP_000072193.1 | aga operon transcriptional regulator AgaR | - |
| RG53_RS16165 () | 3122437..3123717 | + | 1281 | WP_000681922.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| RG53_RS16170 () | 3123740..3124213 | + | 474 | WP_001295547.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| RG53_RS16175 () | 3124224..3125003 | + | 780 | WP_000406214.1 | PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC | - |
| RG53_RS16180 () | 3124993..3125871 | + | 879 | WP_001298758.1 | PTS system mannose/fructose/sorbose family transporter subunit IID | - |
| RG53_RS16185 () | 3125889..3126323 | + | 435 | WP_000948824.1 | PTS sugar transporter subunit IIA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|