MGE detailed information
MGE type: Genomic_island MGE length: 57565 bp
Accession: NZ_CP010178 Location: 1310580..1368144 Organism: Escherichia coli strain H15 Replicon: chromosome
Accession: NZ_CP010178 Location: 1310580..1368144 Organism: Escherichia coli strain H15 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RG53_RS06700 () | 1307397..1309082 | - | 1686 | WP_001365957.1 | ABC transporter ATP-binding protein/permease | - |
| RG53_RS25740 () | 1309285..1309405 | + | 121 | Protein_1216 | hypothetical protein | - |
| RG53_RS06705 () | 1309371..1310528 | - | 1158 | WP_001439065.1 | anaerobic sulfatase maturase | - |
| RG53_RS06710 () | 1310580..1312262 | - | 1683 | WP_001295684.1 | sulfatase | - |
| RG53_RS06715 () | 1312664..1313425 | - | 762 | WP_000060493.1 | acid stress response transcriptional regulator YdeO | - |
| RG53_RS06720 () | 1313500..1313697 | - | 198 | WP_000543389.1 | two-component system connector SafA | - |
| RG53_RS06725 () | 1313945..1316224 | - | 2280 | WP_000726702.1 | acid resistance putative oxidoreductase YdeP | - |
| RG53_RS06730 () | 1316558..1317472 | - | 915 | WP_073527857.1 | Type 1 fimbrin D-mannose specific adhesin | VF |
| RG53_RS06735 () | 1317532..1318035 | - | 504 | WP_000825458.1 | Protein FimG | VF |
| RG53_RS06740 () | 1318048..1318578 | - | 531 | WP_000876784.1 | Protein FimF | VF |
| RG53_RS06745 () | 1318592..1321243 | - | 2652 | WP_001330903.1 | Outer membrane usher protein FimD | VF |
| RG53_RS06750 () | 1321285..1321995 | - | 711 | WP_001195172.1 | Chaperone protein FocC | VF |
| RG53_RS06755 () | 1322356..1322919 | - | 564 | WP_001296758.1 | Type-1 fimbrial protein, A chain | VF |
| RG53_RS06760 () | 1323352..1323560 | - | 209 | Protein_1228 | helix-turn-helix transcriptional regulator | - |
| RG53_RS06765 () | 1324078..1324557 | + | 480 | WP_001542736.1 | hypothetical protein | - |
| RG53_RS06770 () | 1324579..1325382 | + | 804 | WP_000619352.1 | TIGR02391 family protein | - |
| RG53_RS06775 () | 1325403..1326836 | + | 1434 | WP_073527858.1 | restriction endonuclease | - |
| RG53_RS06780 () | 1326937..1330059 | + | 3123 | WP_000345550.1 | hypothetical protein | - |
| RG53_RS06785 () | 1330237..1331886 | + | 1650 | WP_000665639.1 | metallophosphoesterase | - |
| RG53_RS06790 () | 1331883..1332719 | + | 837 | WP_000770925.1 | HAD-IA family hydrolase | - |
| RG53_RS06795 () | 1333375..1334154 | + | 780 | WP_000248889.1 | DUF1837 domain-containing protein | - |
| RG53_RS06800 () | 1334138..1337671 | + | 3534 | WP_001542734.1 | DEAD/DEAH box helicase | - |
| RG53_RS06805 () | 1337801..1337989 | + | 189 | Protein_1237 | IS3 family transposase | - |
| RG53_RS06810 () | 1338251..1338547 | - | 297 | WP_001542733.1 | helix-turn-helix domain-containing protein | - |
| RG53_RS25275 () | 1338918..1339616 | + | 699 | Protein_1239 | IS1 family transposase | - |
| RG53_RS06835 () | 1339956..1340564 | + | 609 | WP_000756958.1 | hypothetical protein | VF |
| RG53_RS06840 () | 1340758..1341459 | + | 702 | WP_000820820.1 | putative fimbrial chaperone YadV | VF |
| RG53_RS06845 () | 1341471..1343957 | + | 2487 | WP_000813719.1 | Outer membrane usher protein HtrE | VF |
| RG53_RS06850 () | 1343948..1344922 | + | 975 | WP_000055502.1 | Fimbria adhesin protein | VF |
| RG53_RS06855 () | 1344937..1345587 | + | 651 | WP_001283944.1 | hypothetical protein | VF |
| RG53_RS06860 () | 1345649..1346365 | - | 717 | WP_000994520.1 | Cyclic di-GMP phosphodiesterase PdeH | VF |
| RG53_RS06865 () | 1346507..1347091 | - | 585 | WP_000799244.1 | hypothetical protein | VF |
| RG53_RS06870 () | 1347209..1347919 | - | 711 | WP_001289134.1 | Flagellar brake protein YcgR | VF |
| RG53_RS06875 () | 1348237..1349205 | - | 969 | WP_187655831.1 | IS5 family transposase IS903B | Transposase |
| RG53_RS06880 () | 1349293..1350459 | + | 1167 | WP_024223630.1 | Alcohol dehydrogenase 2 | VF |
| RG53_RS06885 () | 1351012..1352535 | + | 1524 | WP_000998254.1 | type I restriction-modification system subunit M | - |
| RG53_RS06890 () | 1352525..1353709 | + | 1185 | WP_073527859.1 | restriction endonuclease subunit S | - |
| RG53_RS06895 () | 1353706..1354389 | + | 684 | WP_000779017.1 | YecA family protein | - |
| RG53_RS06900 () | 1354442..1357726 | + | 3285 | WP_001077330.1 | type I restriction endonuclease subunit R | - |
| RG53_RS06905 () | 1357723..1358478 | + | 756 | WP_001291050.1 | M48 family metallopeptidase | - |
| RG53_RS06915 () | 1358787..1359347 | - | 561 | WP_001088752.1 | hypothetical protein | - |
| RG53_RS06920 () | 1359444..1359776 | + | 333 | WP_001542728.1 | helix-turn-helix domain-containing protein | - |
| RG53_RS06925 () | 1359950..1360453 | - | 504 | WP_001140767.1 | hypothetical protein | - |
| RG53_RS06930 () | 1360446..1362983 | - | 2538 | WP_000211440.1 | hypothetical protein | - |
| RG53_RS06935 () | 1362980..1364650 | - | 1671 | WP_039497512.1 | hypothetical protein ; Integrase | Integrase |
| RG53_RS06940 () | 1364613..1366136 | - | 1524 | WP_000331940.1 | hypothetical protein ; Integrase | Integrase |
| RG53_RS06945 () | 1366375..1367697 | - | 1323 | WP_001125463.1 | type II toxin-antitoxin system serine/threonine protein kinase toxin HipA | Toxin Detail |
| RG53_RS06950 () | 1367697..1367963 | - | 267 | WP_001296726.1 | type II toxin-antitoxin system antitoxin HipB | Antitoxin Detail |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|