MGE detailed information
MGE type: Genomic_island MGE length: 11788 bp
Accession: NZ_CP010177 Location: 1952207..1963994 Organism: Escherichia coli strain H14 Replicon: chromosome
Accession: NZ_CP010177 Location: 1952207..1963994 Organism: Escherichia coli strain H14 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RG52_RS09930 () | 1947208..1947642 | - | 435 | WP_000948824.1 | PTS sugar transporter subunit IIA | - |
| RG52_RS09935 () | 1947660..1948538 | - | 879 | WP_001295548.1 | PTS system mannose/fructose/sorbose family transporter subunit IID | - |
| RG52_RS09940 () | 1948528..1949307 | - | 780 | WP_000406214.1 | PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC | - |
| RG52_RS09945 () | 1949318..1949791 | - | 474 | WP_001295547.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| RG52_RS09950 () | 1949814..1951094 | - | 1281 | WP_000681933.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| RG52_RS09960 () | 1951343..1952152 | + | 810 | WP_000072187.1 | aga operon transcriptional regulator AgaR | - |
| RG52_RS09965 () | 1952207..1952671 | - | 465 | WP_000347267.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| RG52_RS09970 () | 1952671..1953006 | - | 336 | WP_001307405.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| RG52_RS09975 () | 1953155..1954726 | - | 1572 | WP_001273741.1 | galactarate dehydratase | - |
| RG52_RS09980 () | 1955101..1956435 | + | 1335 | WP_073508559.1 | galactarate/glucarate/glycerate transporter GarP | - |
| RG52_RS09985 () | 1956451..1957221 | + | 771 | WP_001058227.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| RG52_RS09990 () | 1957251..1958141 | + | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| RG52_RS09995 () | 1958238..1959383 | + | 1146 | WP_001299416.1 | glycerate 2-kinase | - |
| RG52_RS10010 () | 1960519..1961706 | - | 1188 | WP_000484578.1 | YhaC family protein | - |
| RG52_RS10015 () | 1961728..1962267 | - | 540 | WP_000675746.1 | hypothetical protein | - |
| RG52_RS25425 () | 1962523..1962741 | - | 219 | WP_001390702.1 | transcriptional activator TdcR | - |
| RG52_RS10025 () | 1963056..1963994 | + | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| RG52_RS10030 () | 1964093..1965082 | + | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| RG52_RS10035 () | 1965104..1966435 | + | 1332 | WP_000107720.1 | threonine/serine transporter TdcC | - |
| RG52_RS10040 () | 1966461..1967669 | + | 1209 | WP_001352528.1 | propionate kinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|