MGE detailed information
MGE type: Genomic_island MGE length: 18836 bp
Accession: NZ_CP010152 Location: 302069..320904 Organism: Escherichia coli strain D9 Replicon: chromosome
Accession: NZ_CP010152 Location: 302069..320904 Organism: Escherichia coli strain D9 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RG42_RS01510 () | 299200..300108 | - | 909 | WP_001090758.1 | transcriptional regulator MelR | - |
| RG42_RS01520 () | 300391..301746 | + | 1356 | WP_073503148.1 | alpha-galactosidase | - |
| RG42_RS26195 () | 301849..301998 | + | 150 | Protein_252 | melibiose:sodium transporter MelB | - |
| RG42_RS25735 () | 302069..303216 | + | 1148 | WP_085949154.1 | IS3 family transposase ISEc52 | Transposase |
| RG42_RS01540 () | 303244..303759 | + | 516 | Protein_254 | MFS transporter | - |
| RG42_RS01545 () | 303898..304527 | - | 630 | WP_000198773.1 | DUF2238 domain-containing protein | - |
| RG42_RS01550 () | 304650..306296 | - | 1647 | WP_000066707.1 | class I fumarate hydratase | - |
| RG42_RS01555 () | 306374..307714 | - | 1341 | WP_000899522.1 | anaerobic C4-dicarboxylate transporter DcuB | - |
| RG42_RS01565 () | 308285..309004 | - | 720 | WP_000611288.1 | Transcriptional regulatory protein DcuR | VF |
| RG42_RS01570 () | 309001..310632 | - | 1632 | WP_001216477.1 | sensor histidine kinase | - |
| RG42_RS01575 () | 310813..311043 | + | 231 | WP_000371704.1 | (4Fe-4S)-binding protein | - |
| RG42_RS01580 () | 311055..311327 | + | 273 | WP_000405651.1 | N-acetyltransferase | - |
| RG42_RS01590 () | 311554..311850 | + | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| RG42_RS01595 () | 311878..312051 | + | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| RG42_RS01600 () | 312170..313687 | - | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| RG42_RS01605 () | 313924..315381 | - | 1458 | WP_000856829.1 | dipeptide/tripeptide permease DtpC | - |
| RG42_RS01610 () | 315440..317587 | - | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| RG42_RS01615 () | 317667..319001 | - | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| RG42_RS01620 () | 319366..320904 | - | 1539 | WP_073503149.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| RG42_RS01635 () | 321703..322278 | - | 576 | WP_001188520.1 | transcriptional regulator | - |
| RG42_RS01640 () | 322315..324012 | - | 1698 | WP_000068922.1 | protein-disulfide reductase DsbD | - |
| RG42_RS01645 () | 323988..324326 | - | 339 | WP_000883400.1 | divalent cation tolerance protein CutA | - |
| RG42_RS01650 () | 324442..325743 | - | 1302 | WP_000961959.1 | anaerobic C4-dicarboxylate transporter DcuA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|