MGE detailed information
MGE type: Genomic_island MGE length: 24161 bp
Accession: NZ_CP010148 Location: 1594097..1618257 Organism: Escherichia coli strain D6 Replicon: chromosome
Accession: NZ_CP010148 Location: 1594097..1618257 Organism: Escherichia coli strain D6 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RG39_RS08250 () | 1590767..1592224 | + | 1458 | WP_000856829.1 | dipeptide/tripeptide permease DtpC | - |
| RG39_RS08255 () | 1592461..1593978 | + | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| RG39_RS08260 () | 1594097..1594270 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| RG39_RS08265 () | 1594298..1594594 | - | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| RG39_RS08275 () | 1594821..1595093 | - | 273 | WP_000405647.1 | N-acetyltransferase | - |
| RG39_RS08280 () | 1595306..1599235 | - | 3930 | WP_024172618.1 | Serine protease EspC | VF |
| RG39_RS08285 () | 1600052..1600496 | + | 445 | Protein_1497 | LysR family transcriptional regulator | - |
| RG39_RS08290 () | 1600718..1601548 | - | 831 | WP_001402793.1 | AraC family transcriptional regulator | - |
| RG39_RS08300 () | 1602471..1606316 | - | 3846 | WP_024172617.1 | Hemoglobin-binding protease hbp autotransporter | VF |
| RG39_RS08305 () | 1606668..1607195 | + | 528 | WP_001402790.1 | hypothetical protein | VF |
| RG39_RS08310 () | 1607260..1609617 | + | 2358 | WP_001402789.1 | Outer membrane usher protein YraJ | VF |
| RG39_RS08315 () | 1609610..1610311 | + | 702 | WP_024170839.1 | Chaperone protein FaeE | VF |
| RG39_RS08320 () | 1610331..1611329 | + | 999 | WP_001402787.1 | hypothetical protein | - |
| RG39_RS08325 () | 1611424..1611864 | + | 441 | WP_001402786.1 | fimbrial protein | - |
| RG39_RS08330 () | 1611857..1612375 | + | 519 | WP_003582778.1 | fimbrial family protein | - |
| RG39_RS08335 () | 1612421..1612978 | + | 558 | WP_001402784.1 | IS3 family transposase ISKpn1 | Transposase |
| RG39_RS08340 () | 1613032..1613262 | + | 231 | WP_089562688.1 | IS3 family transposase | - |
| RG39_RS08345 () | 1613314..1615476 | - | 2163 | WP_001725195.1 | peptidase domain-containing ABC transporter | - |
| RG39_RS08350 () | 1615469..1616689 | - | 1221 | WP_001402780.1 | HlyD family efflux transporter periplasmic adaptor subunit | - |
| RG39_RS08355 () | 1616728..1617300 | - | 573 | WP_000661408.1 | hypothetical protein | - |
| RG39_RS26265 () | 1617703..1618454 | + | 752 | Protein_1511 | IS3 family transposase | - |
| RG39_RS08370 () | 1618583..1620214 | + | 1632 | WP_001216487.1 | sensor histidine kinase | - |
| RG39_RS08375 () | 1620211..1620930 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
| RG39_RS08385 () | 1621501..1622841 | + | 1341 | WP_000899522.1 | anaerobic C4-dicarboxylate transporter DcuB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|