MGE detailed information
MGE type: Genomic_island MGE length: 17600 bp
Accession: NZ_CP010145 Location: 4304085..4321684 Organism: Escherichia coli strain D5 Replicon: chromosome
Accession: NZ_CP010145 Location: 4304085..4321684 Organism: Escherichia coli strain D5 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RG38_RS22405 () | 4299301..4303536 | + | 4236 | WP_000509071.1 | RHS repeat protein | - |
| RG38_RS22410 () | 4303514..4303906 | + | 393 | WP_001101835.1 | hypothetical protein | - |
| RG38_RS22420 () | 4304085..4305221 | + | 1137 | Protein_4015 | ISAs1 family transposase ISEc1 | Transposase |
| RG38_RS22425 () | 4305251..4305703 | + | 453 | WP_000960005.1 | hypothetical protein | - |
| RG38_RS22430 () | 4305921..4306163 | + | 243 | WP_071524591.1 | DUF3969 family protein | - |
| RG38_RS27590 () | 4306244..4308745 | + | 2502 | WP_073511573.1 | hypothetical protein | VF |
| RG38_RS27600 () | 4308714..4309904 | + | 1191 | WP_001129574.1 | hypothetical protein | VF |
| RG38_RS22445 () | 4309888..4310370 | + | 483 | WP_000939262.1 | hypothetical protein | - |
| RG38_RS27605 () | 4310285..4310470 | - | 186 | WP_122985282.1 | hypothetical protein | - |
| RG38_RS22450 () | 4310551..4311677 | + | 1127 | Protein_4022 | ISAs1 family transposase ISEc26 | Transposase |
| RG38_RS22465 () | 4311780..4312916 | + | 1137 | Protein_4023 | ISAs1 family transposase ISEc1 | Transposase |
| RG38_RS22470 () | 4312958..4313728 | - | 771 | WP_001118038.1 | 2-oxoglutaramate amidase | - |
| RG38_RS22475 () | 4313909..4314355 | + | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| RG38_RS22480 () | 4314398..4316842 | - | 2445 | WP_000973081.1 | Crotonobetainyl-CoA dehydrogenase | VF |
| RG38_RS22485 () | 4317082..4317660 | + | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| RG38_RS22490 () | 4317866..4318633 | + | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| RG38_RS22495 () | 4318604..4319344 | - | 741 | WP_001225679.1 | murein L,D-transpeptidase | - |
| RG38_RS22500 () | 4319500..4319778 | - | 279 | WP_000615976.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| RG38_RS22505 () | 4319781..4320041 | - | 261 | WP_000729704.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| RG38_RS22510 () | 4320227..4321000 | + | 774 | WP_000543895.1 | hypothetical protein | VF |
| RG38_RS22515 () | 4321057..4321413 | - | 357 | WP_001030483.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| RG38_RS22520 () | 4321406..4321684 | - | 279 | WP_000598760.1 | type II toxin-antitoxin system HicA family toxin | - |
| RG38_RS22525 () | 4321789..4323501 | - | 1713 | Protein_4035 | flagellar biosynthesis protein FlhA | - |
| RG38_RS22530 () | 4323473..4324258 | + | 786 | WP_000207575.1 | putative lateral flagellar export/assembly protein LafU | - |
| RG38_RS22535 () | 4324329..4325384 | + | 1056 | WP_001226183.1 | DNA polymerase IV | - |
| RG38_RS22540 () | 4325381..4325833 | + | 453 | WP_001059855.1 | GNAT family N-acetyltransferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|