MGE detailed information
MGE type: Genomic_island MGE length: 11456 bp
Accession: NZ_CP010122 Location: 4087652..4099107 Organism: Escherichia coli strain C5 Replicon: chromosome
Accession: NZ_CP010122 Location: 4087652..4099107 Organism: Escherichia coli strain C5 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RG28_RS21730 () | 4083977..4085185 | - | 1209 | WP_001297162.1 | propionate kinase | - |
| RG28_RS21735 () | 4085211..4086542 | - | 1332 | WP_000107720.1 | threonine/serine transporter TdcC | - |
| RG28_RS21740 () | 4086564..4087553 | - | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| RG28_RS21745 () | 4087652..4088590 | - | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| RG28_RS32155 () | 4088905..4089123 | + | 219 | WP_001390702.1 | transcriptional activator TdcR | - |
| RG28_RS21755 () | 4089379..4089918 | + | 540 | WP_000675746.1 | hypothetical protein | - |
| RG28_RS21760 () | 4089940..4091127 | + | 1188 | WP_000484573.1 | YhaC family protein | - |
| RG28_RS21770 () | 4091931..4093076 | - | 1146 | WP_001297158.1 | glycerate 2-kinase | - |
| RG28_RS21775 () | 4093173..4094063 | - | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| RG28_RS21780 () | 4094093..4094863 | - | 771 | WP_001058227.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| RG28_RS21785 () | 4094879..4096213 | - | 1335 | WP_000599636.1 | galactarate/glucarate/glycerate transporter GarP | - |
| RG28_RS21790 () | 4096588..4098159 | + | 1572 | WP_001273741.1 | galactarate dehydratase | - |
| RG28_RS21795 () | 4098308..4098643 | + | 336 | WP_001307405.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| RG28_RS21800 () | 4098643..4099107 | + | 465 | WP_000347266.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| RG28_RS21805 () | 4099162..4099971 | - | 810 | WP_000072187.1 | aga operon transcriptional regulator AgaR | - |
| RG28_RS21815 () | 4100220..4101500 | + | 1281 | WP_000681921.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| RG28_RS21820 () | 4101523..4101996 | + | 474 | WP_001295547.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| RG28_RS21825 () | 4102007..4102786 | + | 780 | WP_000406214.1 | PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC | - |
| RG28_RS21830 () | 4102776..4103654 | + | 879 | WP_001298758.1 | PTS system mannose/fructose/sorbose family transporter subunit IID | - |
| RG28_RS21835 () | 4103672..4104106 | + | 435 | WP_073521138.1 | PTS sugar transporter subunit IIA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|