MGE detailed information
MGE type: Genomic_island MGE length: 11675 bp
Accession: NZ_CP010117 Location: 4180048..4191722 Organism: Escherichia coli strain C2 Replicon: chromosome
Accession: NZ_CP010117 Location: 4180048..4191722 Organism: Escherichia coli strain C2 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RG25_RS21520 () | 4175049..4175483 | - | 435 | WP_000948824.1 | PTS sugar transporter subunit IIA | - |
| RG25_RS21525 () | 4175501..4176379 | - | 879 | WP_001298758.1 | PTS system mannose/fructose/sorbose family transporter subunit IID | - |
| RG25_RS21530 () | 4176369..4177148 | - | 780 | WP_000406214.1 | PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC | - |
| RG25_RS21535 () | 4177159..4177632 | - | 474 | WP_001295547.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| RG25_RS21540 () | 4177655..4178935 | - | 1281 | WP_000681921.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| RG25_RS21550 () | 4179184..4179993 | + | 810 | WP_000072187.1 | aga operon transcriptional regulator AgaR | - |
| RG25_RS21555 () | 4180048..4180512 | - | 465 | WP_000347279.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| RG25_RS21560 () | 4180512..4180847 | - | 336 | WP_001307405.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| RG25_RS21565 () | 4180996..4182567 | - | 1572 | WP_001273741.1 | galactarate dehydratase | - |
| RG25_RS21570 () | 4182942..4184276 | + | 1335 | WP_000599636.1 | galactarate/glucarate/glycerate transporter GarP | - |
| RG25_RS21575 () | 4184292..4185062 | + | 771 | WP_001058227.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| RG25_RS21580 () | 4185092..4185982 | + | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| RG25_RS21585 () | 4186079..4187224 | + | 1146 | WP_001299416.1 | glycerate 2-kinase | - |
| RG25_RS21595 () | 4188247..4189434 | - | 1188 | WP_000484573.1 | YhaC family protein | - |
| RG25_RS21600 () | 4189456..4189995 | - | 540 | WP_000675752.1 | hypothetical protein | - |
| RG25_RS26085 () | 4190251..4190469 | - | 219 | WP_001390702.1 | transcriptional activator TdcR | - |
| RG25_RS21610 () | 4190784..4191722 | + | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| RG25_RS21615 () | 4191821..4192810 | + | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| RG25_RS21620 () | 4192832..4194163 | + | 1332 | WP_073508494.1 | threonine/serine transporter TdcC | - |
| RG25_RS21625 () | 4194189..4195397 | + | 1209 | WP_001352528.1 | propionate kinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|