MGE detailed information
MGE type: Genomic_island MGE length: 56655 bp
Accession: NZ_CP010116 Location: 1588806..1645460 Organism: Escherichia coli strain C1 Replicon: chromosome
Accession: NZ_CP010116 Location: 1588806..1645460 Organism: Escherichia coli strain C1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RC72_RS07950 () | 1584131..1584487 | - | 357 | WP_001030484.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| RC72_RS07955 () | 1584480..1584758 | - | 279 | WP_000598760.1 | type II toxin-antitoxin system HicA family toxin | - |
| RC72_RS07960 () | 1584863..1586575 | - | 1713 | Protein_1424 | flagellar biosynthesis protein FlhA | - |
| RC72_RS07965 () | 1586547..1587332 | + | 786 | WP_019842510.1 | putative lateral flagellar export/assembly protein LafU | - |
| RC72_RS07970 () | 1587403..1588458 | + | 1056 | WP_001550655.1 | DNA polymerase IV | - |
| RC72_RS07975 () | 1588510..1588803 | + | 294 | WP_000554755.1 | type I toxin-antitoxin system antitoxin YafN | - |
| RC72_RS07980 () | 1588806..1589204 | + | 399 | WP_001263491.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | - |
| RC72_RS07985 () | 1589214..1589666 | + | 453 | WP_019842500.1 | GNAT family N-acetyltransferase | - |
| RC72_RS07990 () | 1589912..1590118 | + | 207 | Protein_1430 | RtcB family protein | - |
| RC72_RS26095 () | 1590114..1590466 | + | 353 | Protein_1431 | peptide chain release factor H | - |
| RC72_RS08000 () | 1590523..1591980 | - | 1458 | WP_001293009.1 | cytosol nonspecific dipeptidase | - |
| RC72_RS08005 () | 1592241..1592699 | + | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| RC72_RS08010 () | 1592791..1594035 | + | 1245 | WP_000189541.1 | esterase FrsA | - |
| - () | 1593295..1593375 | + | 81 | NuclAT_11 | - | - |
| - () | 1593295..1593375 | + | 81 | NuclAT_11 | - | - |
| - () | 1593295..1593375 | + | 81 | NuclAT_11 | - | - |
| - () | 1593295..1593375 | + | 81 | NuclAT_11 | - | - |
| RC72_RS08015 () | 1594093..1594494 | + | 402 | WP_000174684.1 | sigma factor-binding protein Crl | - |
| RC72_RS08020 () | 1594533..1595588 | - | 1056 | WP_000749881.1 | phosphoporin PhoE | - |
| RC72_RS08025 () | 1595876..1596979 | + | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| RC72_RS08030 () | 1596991..1598244 | + | 1254 | WP_001550659.1 | glutamate-5-semialdehyde dehydrogenase | - |
| RC72_RS08040 () | 1598449..1598607 | - | 159 | Protein_1439 | integrase | - |
| RC72_RS25095 () | 1598699..1598801 | - | 103 | Protein_1440 | helix-turn-helix domain-containing protein | - |
| RC72_RS08045 () | 1598798..1599268 | - | 471 | WP_000201185.1 | hypothetical protein | - |
| RC72_RS25585 () | 1599314..1599454 | - | 141 | WP_001308408.1 | ash family protein | - |
| RC72_RS08050 () | 1599615..1602824 | - | 3210 | WP_001521910.1 | RNA-directed DNA polymerase | - |
| RC72_RS08055 () | 1603140..1603922 | + | 783 | WP_001550661.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | Antitoxin Detail |
| RC72_RS08060 () | 1603909..1604829 | + | 921 | WP_000365809.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| RC72_RS08070 () | 1605263..1606147 | - | 885 | WP_001119037.1 | HTH-type transcriptional regulator ArgP | VF |
| RC72_RS08075 () | 1606412..1607470 | + | 1059 | WP_122987197.1 | alpha/beta hydrolase | - |
| RC72_RS08080 () | 1607612..1608739 | + | 1128 | WP_001550663.1 | MFS transporter | - |
| RC72_RS08085 () | 1608918..1609871 | - | 954 | WP_001550665.1 | molybdenum cofactor insertion chaperone PaoD | - |
| RC72_RS08090 () | 1609881..1612628 | - | 2748 | WP_072617206.1 | molybdopterin-dependent oxidoreductase | - |
| RC72_RS08095 () | 1612625..1613314 | - | 690 | WP_000070677.1 | aldehyde dehydrogenase iron-sulfur subunit | - |
| RC72_RS08105 () | 1613720..1614334 | + | 615 | WP_001019920.1 | YagU family protein | - |
| RC72_RS08115 () | 1614583..1614912 | - | 330 | WP_001303809.1 | YkgJ family cysteine cluster protein | - |
| RC72_RS08120 () | 1615225..1615935 | - | 711 | WP_001586708.1 | hypothetical protein | VF |
| RC72_RS08125 () | 1615904..1617547 | - | 1644 | WP_001521920.1 | hypothetical protein | VF |
| RC72_RS08130 () | 1617537..1620062 | - | 2526 | WP_001131068.1 | hypothetical protein | VF |
| RC72_RS08135 () | 1620088..1620756 | - | 669 | WP_001521922.1 | hypothetical protein | VF |
| RC72_RS08140 () | 1620813..1621400 | - | 588 | WP_000730972.1 | hypothetical protein | VF |
| RC72_RS08145 () | 1621475..1622017 | - | 543 | WP_001305433.1 | hypothetical protein | VF |
| RC72_RS08160 () | 1622841..1623031 | + | 191 | Protein_1460 | hypothetical protein | - |
| RC72_RS08165 () | 1623101..1623241 | - | 141 | WP_000866436.1 | type B 50S ribosomal protein L36 | - |
| RC72_RS08170 () | 1623241..1623504 | - | 264 | WP_000803998.1 | type B 50S ribosomal protein L31 | - |
| RC72_RS08175 () | 1623863..1623964 | - | 102 | WP_000662258.1 | hypothetical protein | - |
| RC72_RS08180 () | 1624436..1625578 | - | 1143 | WP_001595351.1 | NADH-dependent flavin oxidoreductase | - |
| RC72_RS08185 () | 1625752..1626672 | - | 921 | WP_000860030.1 | alpha/beta hydrolase | - |
| RC72_RS08190 () | 1626829..1627755 | + | 927 | WP_001328123.1 | HTH-type transcriptional regulator ArgP | VF |
| RC72_RS08195 () | 1627955..1628848 | + | 894 | WP_001550671.1 | HTH-type transcriptional regulator ArgP | VF |
| RC72_RS08200 () | 1628879..1629868 | - | 990 | WP_001172288.1 | aldo/keto reductase | - |
| RC72_RS08205 () | 1629895..1630746 | - | 852 | WP_001550672.1 | aldo/keto reductase | - |
| RC72_RS08210 () | 1631311..1635561 | + | 4251 | WP_001550673.1 | hypothetical protein | VF |
| RC72_RS08215 () | 1635686..1636543 | - | 858 | WP_001309280.1 | HTH-type transcriptional activator RhaR | VF |
| RC72_RS08220 () | 1636791..1637660 | + | 870 | WP_001309281.1 | aldo/keto reductase | - |
| RC72_RS08225 () | 1637820..1638413 | - | 594 | WP_001306921.1 | reactive chlorine species resistance protein RclC | - |
| RC72_RS08230 () | 1638425..1638661 | - | 237 | WP_000474077.1 | DUF1471 domain-containing protein | - |
| RC72_RS08235 () | 1638770..1640095 | - | 1326 | WP_072617209.1 | pyridine nucleotide-disulfide oxidoreductase | - |
| RC72_RS08240 () | 1640322..1641176 | + | 855 | WP_000339603.1 | DNA-binding transcriptional regulator RclR | - |
| RC72_RS08245 () | 1641704..1642423 | + | 720 | WP_001102122.1 | (Fe-S)-binding protein | - |
| RC72_RS08250 () | 1642434..1643861 | + | 1428 | WP_001550674.1 | iron-sulfur cluster-binding protein | - |
| RC72_RS08255 () | 1643854..1644549 | + | 696 | WP_001550675.1 | lactate utilization protein C | - |
| RC72_RS08270 () | 1644792..1645460 | - | 669 | WP_001550676.1 | hypothetical protein | - |
| RC72_RS08275 () | 1645671..1647341 | - | 1671 | WP_001550677.1 | choline dehydrogenase | - |
| RC72_RS08280 () | 1647355..1648827 | - | 1473 | WP_001550678.1 | betaine-aldehyde dehydrogenase | - |
| RC72_RS08285 () | 1648841..1649428 | - | 588 | WP_001376735.1 | transcriptional regulator BetI | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|