MGE detailed information
MGE type: Prophage MGE length: 78951 bp
Accession: NZ_CP009829 Location: 1210867..1289817 Organism: Xylella fastidiosa strain 3124 Replicon: chromosome
Accession: NZ_CP009829 Location: 1210867..1289817 Organism: Xylella fastidiosa strain 3124 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| XFC3_RS05285 () | 1206323..1208398 | + | 2076 | WP_031336577.1 | S46 family peptidase | - |
| XFC3_RS05290 () | 1208463..1209107 | + | 645 | WP_010894352.1 | histidine phosphatase family protein | - |
| XFC3_RS05295 () | 1209065..1209496 | - | 432 | WP_088572595.1 | hypothetical protein | - |
| XFC3_RS05300 () | 1209641..1209976 | + | 336 | WP_088572596.1 | hypothetical protein | - |
| XFC3_RS05305 () | 1209969..1210235 | + | 267 | WP_157285726.1 | hypothetical protein | - |
| XFC3_RS05310 () | 1210239..1210421 | + | 183 | WP_088572598.1 | hypothetical protein | - |
| XFC3_RS05315 () | 1210867..1212042 | + | 1176 | WP_088572601.1 | replication initiation factor domain-containing protein | - |
| XFC3_RS05320 () | 1212083..1212394 | + | 312 | WP_088572602.1 | hypothetical protein | - |
| XFC3_RS05325 () | 1212519..1212770 | + | 252 | WP_088572603.1 | hypothetical protein | - |
| XFC3_RS05330 () | 1212790..1212918 | + | 129 | WP_011097859.1 | hypothetical protein | - |
| XFC3_RS05335 () | 1213050..1214378 | + | 1329 | WP_088572604.1 | hypothetical protein | - |
| XFC3_RS05340 () | 1214391..1214720 | + | 330 | WP_088572605.1 | phage coat protein | - |
| XFC3_RS05345 () | 1214720..1216048 | + | 1329 | WP_088572606.1 | Zonular occludens toxin | - |
| XFC3_RS05350 () | 1216209..1216487 | - | 279 | WP_058570074.1 | hypothetical protein | - |
| XFC3_RS05355 () | 1216550..1216900 | - | 351 | WP_088572667.1 | hypothetical protein | - |
| XFC3_RS05360 () | 1216947..1217351 | - | 405 | WP_088572607.1 | DUF3693 domain-containing protein | - |
| XFC3_RS05365 () | 1217491..1217826 | + | 336 | WP_088572596.1 | hypothetical protein | - |
| XFC3_RS05370 () | 1217819..1218085 | + | 267 | WP_157285726.1 | hypothetical protein | - |
| XFC3_RS05375 () | 1218089..1218271 | + | 183 | WP_088572598.1 | hypothetical protein | - |
| XFC3_RS05380 () | 1218717..1219892 | + | 1176 | WP_088572601.1 | replication initiation factor domain-containing protein | - |
| XFC3_RS05385 () | 1219933..1220244 | + | 312 | WP_088572602.1 | hypothetical protein | - |
| XFC3_RS05390 () | 1220369..1220620 | + | 252 | WP_088572603.1 | hypothetical protein | - |
| XFC3_RS05395 () | 1220640..1220768 | + | 129 | WP_011097859.1 | hypothetical protein | - |
| XFC3_RS05400 () | 1220900..1222228 | + | 1329 | WP_088572604.1 | hypothetical protein | - |
| XFC3_RS05405 () | 1222241..1222570 | + | 330 | WP_088572605.1 | phage coat protein | - |
| XFC3_RS05410 () | 1222570..1223898 | + | 1329 | WP_088572606.1 | Zonular occludens toxin | - |
| XFC3_RS05415 () | 1224059..1224382 | - | 324 | WP_046420095.1 | hypothetical protein | - |
| XFC3_RS05420 () | 1224441..1224788 | - | 348 | WP_088572608.1 | hypothetical protein | - |
| XFC3_RS05425 () | 1225015..1225302 | + | 288 | WP_075584643.1 | hypothetical protein | - |
| XFC3_RS05430 () | 1225365..1225613 | + | 249 | WP_010894337.1 | hypothetical protein | - |
| XFC3_RS05435 () | 1225790..1226863 | - | 1074 | WP_023906500.1 | zonular occludens toxin domain-containing protein | - |
| XFC3_RS05440 () | 1226863..1227147 | - | 285 | WP_023906501.1 | DUF2523 domain-containing protein | - |
| XFC3_RS05445 () | 1227140..1227807 | - | 668 | Protein_1060 | hypothetical protein | - |
| XFC3_RS05450 () | 1227811..1228239 | - | 429 | Protein_1061 | hypothetical protein | - |
| XFC3_RS05455 () | 1228499..1228678 | + | 180 | WP_023907626.1 | hypothetical protein | - |
| XFC3_RS05460 () | 1228807..1228989 | - | 183 | WP_023906503.1 | hypothetical protein | - |
| XFC3_RS05465 () | 1228993..1229307 | - | 315 | WP_143704178.1 | hypothetical protein | - |
| XFC3_RS05470 () | 1229294..1229596 | - | 303 | WP_010894331.1 | hypothetical protein | - |
| XFC3_RS05475 () | 1229737..1230063 | + | 327 | Protein_1066 | DUF3693 domain-containing protein | - |
| XFC3_RS05485 () | 1230221..1230913 | - | 693 | WP_023906504.1 | 7-cyano-7-deazaguanine synthase QueC | - |
| XFC3_RS05490 () | 1231463..1233232 | + | 1770 | WP_023906505.1 | aspartate--tRNA ligase | - |
| XFC3_RS05495 () | 1233427..1234944 | - | 1518 | WP_031337782.1 | fumarate hydratase | - |
| XFC3_RS05500 () | 1235211..1236812 | - | 1602 | WP_023906508.1 | peptidase S41 | - |
| XFC3_RS05505 () | 1236926..1238524 | - | 1599 | WP_023906509.1 | peptidase S41 | - |
| XFC3_RS05510 () | 1239662..1242745 | - | 3084 | WP_157285728.1 | Extracellular serine protease | VF |
| XFC3_RS05515 () | 1243165..1243425 | + | 261 | WP_199251126.1 | IS200-IS605 family transposase ISAba30 | Transposase |
| XFC3_RS05520 () | 1244270..1245178 | - | 909 | WP_023906513.1 | peptidase | - |
| XFC3_RS05525 () | 1245750..1246316 | + | 567 | WP_023906514.1 | SocA family protein | - |
| XFC3_RS05530 () | 1246316..1246543 | + | 228 | WP_023906515.1 | hypothetical protein | - |
| XFC3_RS05535 () | 1246544..1247707 | - | 1164 | WP_023906516.1 | phage tail protein | - |
| XFC3_RS05540 () | 1247711..1248271 | - | 561 | WP_023906517.1 | DUF2612 domain-containing protein | - |
| XFC3_RS05545 () | 1248268..1249413 | - | 1146 | WP_023906518.1 | baseplate J/gp47 family protein | - |
| XFC3_RS05550 () | 1249506..1249859 | - | 354 | WP_023906519.1 | hypothetical protein | - |
| XFC3_RS05555 () | 1249856..1250497 | - | 642 | WP_023906520.1 | hypothetical protein | - |
| XFC3_RS05560 () | 1250494..1251324 | - | 831 | WP_023906521.1 | hypothetical protein | - |
| XFC3_RS05565 () | 1251321..1251638 | - | 318 | WP_023906522.1 | hypothetical protein | - |
| XFC3_RS05570 () | 1251638..1252408 | - | 771 | WP_023906523.1 | hypothetical protein | - |
| XFC3_RS05575 () | 1252569..1252841 | + | 273 | WP_023906524.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| XFC3_RS05580 () | 1252850..1253242 | + | 393 | WP_023906525.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| XFC3_RS05585 () | 1253261..1255150 | - | 1890 | WP_088572609.1 | hypothetical protein | - |
| XFC3_RS05590 () | 1255298..1255720 | - | 423 | WP_023906527.1 | hypothetical protein | - |
| XFC3_RS05595 () | 1255717..1256154 | - | 438 | WP_010894081.1 | DUF3277 family protein | - |
| XFC3_RS05600 () | 1256164..1257653 | - | 1490 | Protein_1090 | DUF3383 domain-containing protein | - |
| XFC3_RS05605 () | 1257654..1258187 | - | 534 | WP_199251127.1 | hypothetical protein | - |
| XFC3_RS05610 () | 1258111..1258491 | - | 381 | WP_023906652.1 | hypothetical protein | - |
| XFC3_RS05615 () | 1258466..1258945 | - | 480 | WP_023906653.1 | hypothetical protein | - |
| XFC3_RS05620 () | 1258942..1259310 | - | 369 | WP_023906654.1 | DUF4054 domain-containing protein | - |
| XFC3_RS05625 () | 1259313..1259636 | - | 324 | WP_023906655.1 | hypothetical protein | - |
| XFC3_RS05630 () | 1259702..1260685 | - | 984 | WP_088572610.1 | DUF2184 domain-containing protein | - |
| XFC3_RS05635 () | 1260695..1261177 | - | 483 | WP_088572611.1 | hypothetical protein | - |
| XFC3_RS05640 () | 1261205..1262395 | - | 1191 | WP_031337857.1 | DUF2213 domain-containing protein | - |
| XFC3_RS05645 () | 1262395..1263240 | - | 846 | WP_023906659.1 | phage head morphogenesis protein | - |
| XFC3_RS05650 () | 1263309..1263647 | + | 339 | WP_023906660.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| XFC3_RS05655 () | 1263644..1263925 | + | 282 | WP_023906661.1 | helix-turn-helix domain-containing protein | - |
| XFC3_RS05660 () | 1263974..1265362 | - | 1389 | WP_031337859.1 | DUF1073 domain-containing protein | - |
| XFC3_RS05665 () | 1265359..1266909 | - | 1551 | WP_088572612.1 | phage terminase large subunit | - |
| XFC3_RS05670 () | 1266860..1267258 | - | 399 | WP_023906540.1 | hypothetical protein | - |
| XFC3_RS05675 () | 1267350..1267562 | - | 213 | WP_031337807.1 | hypothetical protein | - |
| XFC3_RS05680 () | 1267564..1268025 | - | 462 | WP_023906542.1 | hypothetical protein | - |
| XFC3_RS05685 () | 1268015..1268344 | - | 330 | WP_010894063.1 | phage holin family protein | - |
| XFC3_RS05690 () | 1268337..1268834 | - | 498 | WP_023906544.1 | lysozyme | - |
| XFC3_RS05695 () | 1269016..1269297 | + | 282 | WP_031337809.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| XFC3_RS05700 () | 1269307..1269606 | + | 300 | WP_004089519.1 | HigA family addiction module antidote protein | - |
| XFC3_RS05705 () | 1269689..1270387 | - | 699 | WP_031337811.1 | hypothetical protein | - |
| XFC3_RS05710 () | 1270407..1270820 | - | 414 | WP_023906546.1 | hypothetical protein | - |
| XFC3_RS05715 () | 1270817..1271581 | - | 765 | WP_196432185.1 | hypothetical protein | - |
| XFC3_RS05720 () | 1271487..1272575 | - | 1089 | WP_023906548.1 | YdaU family protein | - |
| XFC3_RS05725 () | 1272572..1272880 | - | 309 | WP_023906549.1 | DUF1376 domain-containing protein | - |
| XFC3_RS05730 () | 1272877..1273989 | - | 1113 | WP_031337816.1 | Bro-N domain-containing protein | - |
| XFC3_RS05735 () | 1274193..1274576 | - | 384 | WP_023906550.1 | hypothetical protein | - |
| XFC3_RS05740 () | 1274573..1274821 | - | 249 | WP_023906551.1 | hypothetical protein | - |
| XFC3_RS05745 () | 1274818..1275006 | - | 189 | WP_023906552.1 | hypothetical protein | - |
| XFC3_RS05750 () | 1275067..1275408 | - | 342 | WP_023906553.1 | hypothetical protein | - |
| XFC3_RS05755 () | 1275510..1275881 | + | 372 | WP_023906555.1 | hypothetical protein | - |
| XFC3_RS05760 () | 1276061..1276315 | - | 255 | WP_080673511.1 | helix-turn-helix domain-containing protein | - |
| XFC3_RS05765 () | 1276398..1277378 | + | 981 | WP_161629358.1 | XRE family transcriptional regulator | - |
| XFC3_RS05770 () | 1277468..1278265 | - | 798 | WP_023906557.1 | hypothetical protein | - |
| XFC3_RS05775 () | 1278228..1278431 | - | 204 | WP_088572668.1 | hypothetical protein | - |
| XFC3_RS05780 () | 1278595..1279107 | - | 513 | WP_031337817.1 | DUF1640 domain-containing protein | - |
| XFC3_RS05785 () | 1279238..1279757 | - | 520 | Protein_1127 | hypothetical protein | - |
| XFC3_RS05790 () | 1279881..1280417 | + | 537 | WP_023906559.1 | hypothetical protein | - |
| XFC3_RS05795 () | 1280414..1280884 | + | 471 | WP_023906560.1 | DUF1566 domain-containing protein | - |
| XFC3_RS05800 () | 1280881..1281279 | + | 399 | WP_023906561.1 | hypothetical protein | - |
| XFC3_RS05805 () | 1281276..1281467 | + | 192 | WP_004086365.1 | hypothetical protein | - |
| XFC3_RS05810 () | 1281491..1281682 | + | 192 | WP_023906562.1 | hypothetical protein | - |
| XFC3_RS05815 () | 1281703..1282047 | + | 345 | WP_023906563.1 | hypothetical protein | - |
| XFC3_RS05820 () | 1282087..1282908 | + | 822 | WP_023906564.1 | YfdQ family protein | - |
| XFC3_RS05825 () | 1282924..1283850 | + | 927 | WP_023906565.1 | phage recombination protein Bet | - |
| XFC3_RS05830 () | 1283847..1285490 | + | 1644 | WP_023906566.1 | YqaJ viral recombinase family protein | - |
| XFC3_RS05835 () | 1285523..1285840 | + | 318 | WP_152527173.1 | hypothetical protein | - |
| XFC3_RS05840 () | 1285837..1286412 | + | 576 | WP_023906567.1 | Bro-N domain-containing protein | - |
| XFC3_RS05845 () | 1286412..1286696 | + | 285 | Protein_1139 | hypothetical protein | - |
| XFC3_RS05850 () | 1286697..1287317 | + | 621 | WP_023906568.1 | Bro-N domain-containing protein | - |
| XFC3_RS05855 () | 1287314..1288027 | + | 714 | WP_023906569.1 | phage antirepressor KilAC domain-containing protein | - |
| XFC3_RS05860 () | 1288085..1288531 | + | 447 | WP_023906570.1 | single-stranded DNA-binding protein | - |
| XFC3_RS05865 () | 1288550..1288798 | + | 249 | WP_023906571.1 | DUF4224 domain-containing protein | - |
| XFC3_RS05870 () | 1288798..1289817 | + | 1020 | WP_023906572.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| XFC3_RS05875 () | 1289959..1291008 | + | 1050 | WP_038200603.1 | two-component sensor histidine kinase | - |
| XFC3_RS05880 () | 1291001..1292428 | + | 1428 | WP_010894314.1 | nitrogen regulation protein NR(I) | - |
| XFC3_RS05885 () | 1292556..1292686 | - | 131 | Protein_1147 | Tn3 family transposase | - |
| XFC3_RS05890 () | 1292766..1293274 | + | 509 | Protein_1148 | type IA DNA topoisomerase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|