MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 70305 bp
Accession: NZ_CP009721 Location: 1..70305 Organism: Yersinia pestis strain Shasta Replicon: plasmid pCD
Accession: NZ_CP009721 Location: 1..70305 Organism: Yersinia pestis strain Shasta Replicon: plasmid pCD
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BZ15_RS00010 () | 405..1664 | + | 1260 | WP_002212919.1 | Yop proteins translocation protein D | VF |
| BZ15_RS00015 () | 1661..1861 | + | 201 | WP_002212917.1 | Putative Yop proteins translocation protein E | VF |
| BZ15_RS00020 () | 1862..2125 | + | 264 | WP_002212916.1 | Yop proteins translocation protein F | VF |
| BZ15_RS00025 () | 2127..2474 | + | 348 | WP_002229801.1 | Putative Yop proteins translocation protein G | VF |
| BZ15_RS00030 () | 2471..2968 | + | 498 | WP_002212915.1 | Yop proteins translocation protein H | VF |
| BZ15_RS00035 () | 2969..3316 | + | 348 | WP_002212914.1 | Yop proteins translocation protein I | VF |
| BZ15_RS00040 () | 3323..4057 | + | 735 | WP_002212912.1 | Yop proteins translocation lipoprotein J | VF |
| BZ15_RS00045 () | 4057..4686 | + | 630 | WP_002361471.1 | Yop proteins translocation protein K | VF |
| BZ15_RS00050 () | 4632..5297 | + | 666 | WP_010981371.1 | Yop proteins translocation protein L | VF |
| BZ15_RS00055 () | 5522..5869 | + | 348 | WP_002212907.1 | Yop proteins translocation protein M | VF |
| BZ15_RS24195 () | 6417..7446 | + | 1030 | Protein_11 | IS3 family transposase | - |
| BZ15_RS22675 () | 7465..7737 | + | 273 | Protein_12 | transposase | - |
| BZ15_RS00075 () | 7958..9364 | - | 1407 | WP_002213278.1 | Tyrosine-protein phosphatase YopH | VF |
| BZ15_RS00080 () | 9647..9880 | - | 234 | Protein_14 | transposase domain-containing protein | - |
| BZ15_RS00085 () | 9883..10461 | + | 579 | Protein_15 | IS3 family transposase ISYpe1 | Transposase |
| BZ15_RS00090 () | 11047..11913 | - | 867 | WP_002213287.1 | Effector protein YopJ | VF |
| BZ15_RS00095 () | 12309..14507 | - | 2199 | WP_002213290.1 | Protein kinase YpkA | VF |
| BZ15_RS00100 () | 14515..14964 | - | 450 | WP_002229809.1 | hypothetical protein | VF |
| BZ15_RS24200 () | 15220..15532 | - | 313 | Protein_19 | IS3 family transposase ISKpn37 | Transposase |
| BZ15_RS22690 () | 15710..15949 | - | 240 | WP_002213291.1 | hypothetical protein | - |
| BZ15_RS00110 () | 17127..18005 | - | 879 | WP_002213292.1 | incFII family plasmid replication initiator RepA | - |
| BZ15_RS00115 () | 17986..18060 | - | 75 | WP_002233140.1 | RepA leader peptide Tap | - |
| BZ15_RS00120 () | 18302..18556 | - | 255 | WP_002229817.1 | replication regulatory protein RepA | - |
| BZ15_RS00125 () | 18694..18942 | - | 249 | WP_002233137.1 | Phospholipase D | VF |
| BZ15_RS22700 () | 19068..19376 | + | 309 | Protein_25 | DDE-type integrase/transposase/recombinase | - |
| BZ15_RS24595 () | 19359..19766 | - | 408 | WP_002213294.1 | IS3 family transposase ISKpn37 | Transposase |
| BZ15_RS00135 () | 19790..20107 | - | 318 | WP_002213244.1 | IS3 family transposase ISKpn37 | Transposase |
| BZ15_RS00140 () | 20279..20737 | - | 459 | WP_002213246.1 | hypothetical protein | - |
| BZ15_RS00145 () | 20806..21075 | + | 270 | WP_042469136.1 | transposase | - |
| BZ15_RS25315 () | 21173..21331 | - | 159 | Protein_30 | EamA family transporter | - |
| BZ15_RS22710 () | 21401..22704 | - | 1304 | Protein_31 | Adhesin YadA | VF |
| BZ15_RS00165 () | 23304..23654 | + | 351 | Protein_32 | IS3 family transposase IS1351 | Transposase |
| BZ15_RS00170 () | 23687..26002 | - | 2316 | WP_002213256.1 | Tn3 family transposase ISEc63 | Transposase |
| BZ15_RS00175 () | 26166..26717 | + | 552 | WP_002213258.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| BZ15_RS00180 () | 26736..27200 | + | 465 | WP_002224338.1 | hypothetical protein | - |
| BZ15_RS00185 () | 27339..27668 | + | 330 | WP_002229829.1 | hypothetical protein | - |
| BZ15_RS00195 () | 27768..28867 | + | 1100 | WP_086016640.1 | IS3 family transposase ISYpe1 | Transposase |
| BZ15_RS00200 () | 29015..29440 | - | 426 | WP_002213267.1 | hypothetical protein | VF |
| BZ15_RS00205 () | 29816..30214 | - | 399 | Protein_39 | IS21 family transposase IS21 | Transposase |
| BZ15_RS00210 () | 30214..31140 | - | 927 | Protein_40 | IS21 family transposase IS21 | Transposase |
| BZ15_RS00215 () | 31229..32250 | + | 1022 | Protein_41 | IS21 family transposase IS100kyp | Transposase |
| BZ15_RS00220 () | 32247..33029 | + | 783 | WP_001317493.1 | IS21 family transposase IS100kyp | Transposase |
| BZ15_RS24605 () | 33096..33344 | - | 249 | Protein_43 | IS21 family transposase IS21 | Transposase |
| BZ15_RS00235 () | 33447..34091 | + | 645 | Protein_44 | IS3 family transposase ISYen3 | Transposase |
| BZ15_RS00240 () | 34154..34546 | - | 393 | WP_002213403.1 | YopE regulator | VF |
| BZ15_RS00245 () | 34740..35399 | + | 660 | WP_002229754.1 | Outer membrane virulence protein YopE | VF |
| BZ15_RS00250 () | 35539..35838 | - | 300 | WP_002213360.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| BZ15_RS00255 () | 35831..36073 | - | 243 | WP_002224342.1 | type II toxin-antitoxin system ParD family antitoxin | Antitoxin Detail |
| BZ15_RS24215 () | 36239..36531 | - | 293 | Protein_49 | IS6 family transposase ISEas1 | Transposase |
| BZ15_RS25320 () | 36617..36790 | + | 174 | WP_002213357.1 | hypothetical protein | - |
| BZ15_RS25185 () | 36939..37175 | - | 237 | WP_154020274.1 | hypothetical protein | - |
| BZ15_RS00265 () | 37335..38300 | - | 966 | WP_002213354.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| BZ15_RS00270 () | 38297..39463 | - | 1167 | WP_002220902.1 | Sporulation initiation inhibitor protein Soj | VF |
| BZ15_RS24610 () | 40223..41368 | - | 1146 | Protein_54 | IS3 family transposase | - |
| BZ15_RS00290 () | 41475..42093 | - | 619 | Protein_55 | complement resistance protein TraT | - |
| BZ15_RS24225 () | 42251..42544 | - | 294 | Protein_56 | IS3 family transposase | - |
| BZ15_RS00295 () | 42703..43251 | - | 549 | WP_002213007.1 | hypothetical protein | VF |
| BZ15_RS00300 () | 43751..44719 | + | 969 | WP_002213006.1 | Cysteine protease YopT | VF |
| BZ15_RS00305 () | 44719..45117 | + | 399 | WP_002213004.1 | Chaperone protein SycT | VF |
| BZ15_RS22750 () | 45523..45804 | + | 282 | Protein_60 | DDE-type integrase/transposase/recombinase | - |
| BZ15_RS00315 () | 45822..46241 | + | 420 | WP_002222515.1 | hypothetical protein | - |
| BZ15_RS24615 () | 46769..46987 | - | 219 | Protein_62 | IS6 family transposase | - |
| BZ15_RS24620 () | 46990..47235 | + | 246 | WP_116442925.1 | transposase | - |
| BZ15_RS00320 () | 47117..47434 | + | 318 | Protein_64 | IS256 family transposase ISSod4 | Transposase |
| BZ15_RS00325 () | 47477..48706 | - | 1230 | WP_002229779.1 | Outer membrane protein YopM | VF |
| BZ15_RS00330 () | 49100..49309 | - | 210 | WP_002229781.1 | hypothetical protein | - |
| BZ15_RS24230 () | 49330..49967 | + | 638 | Protein_67 | IS6 family transposase | - |
| BZ15_RS00335 () | 50435..51355 | - | 921 | WP_002212987.1 | Protein YopD | VF |
| BZ15_RS00340 () | 51374..52579 | - | 1206 | WP_002212985.1 | Protein YopB | VF |
| BZ15_RS00345 () | 52557..53063 | - | 507 | WP_002222758.1 | Chaperone protein IpgC | VF |
| BZ15_RS00350 () | 53076..54056 | - | 981 | WP_002212981.1 | Virulence-associated V antigen | VF |
| BZ15_RS00355 () | 54058..54345 | - | 288 | WP_002212973.1 | hypothetical protein | VF |
| BZ15_RS00360 () | 54387..54827 | - | 441 | WP_002220918.1 | hypothetical protein | VF |
| BZ15_RS00365 () | 54824..56938 | - | 2115 | WP_002212971.1 | Invasion protein InvA | VF |
| BZ15_RS00370 () | 56925..57269 | - | 345 | WP_002229791.1 | Chaperone protein YscY | VF |
| BZ15_RS00375 () | 57266..57634 | - | 369 | WP_002212969.1 | Yop proteins translocation protein X | VF |
| BZ15_RS00380 () | 57631..58002 | - | 372 | WP_002229794.1 | Chaperone protein SycN | VF |
| BZ15_RS00385 () | 57989..58267 | - | 279 | WP_002212965.1 | Protein TyeA | VF |
| BZ15_RS00390 () | 58248..59129 | - | 882 | WP_002212958.1 | Outer membrane protein YopN | VF |
| BZ15_RS00395 () | 59327..60646 | + | 1320 | WP_002212955.1 | putative ATP synthase YscN | VF |
| BZ15_RS00400 () | 60643..61107 | + | 465 | WP_002212952.1 | Yop proteins translocation protein O | VF |
| BZ15_RS00405 () | 61107..62474 | + | 1368 | WP_002212950.1 | hypothetical protein | VF |
| BZ15_RS00410 () | 62471..63394 | + | 924 | WP_002212948.1 | Yop proteins translocation protein Q | VF |
| BZ15_RS00415 () | 63391..64044 | + | 654 | WP_002212947.1 | Surface presentation of antigens protein SpaP | VF |
| BZ15_RS00420 () | 64046..64312 | + | 267 | WP_002212945.1 | hypothetical protein | VF |
| BZ15_RS00425 () | 64309..65094 | + | 786 | WP_002212938.1 | Surface presentation of antigens protein SpaR | VF |
| BZ15_RS00430 () | 65094..66158 | + | 1065 | WP_002212936.1 | Yop proteins translocation protein U | VF |
| BZ15_RS00435 () | 66734..67129 | + | 396 | WP_002222527.1 | Exoenzyme S synthesis protein B | VF |
| BZ15_RS00440 () | 67253..68068 | + | 816 | WP_002212931.1 | Virulence regulon transcriptional activator VirF | VF |
| BZ15_RS00445 () | 68147..68245 | + | 99 | WP_002229797.1 | type III secretion system protein YscA | - |
| BZ15_RS00450 () | 68471..68884 | + | 414 | WP_002212925.1 | Chaperone protein YscB | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|