MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 120340 bp
Accession: NZ_CP009564 Location: 1..120340 Organism: Salmonella enterica subsp. enterica serovar Newport str. CVM 21550 Replicon: plasmid pCVM21550
Accession: NZ_CP009564 Location: 1..120340 Organism: Salmonella enterica subsp. enterica serovar Newport str. CVM 21550 Replicon: plasmid pCVM21550
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SEEN550_RS00015 () | 4504..4821 | + | 318 | WP_000118520.1 | quaternary ammonium compound efflux SMR transporter SugE | - |
| SEEN550_RS00020 () | 4818..5351 | - | 534 | WP_001221666.1 | lipocalin family protein | - |
| SEEN550_RS00025 () | 5445..6590 | - | 1146 | WP_000976514.1 | class C beta-lactamase CMY-2 | - |
| SEEN550_RS00030 () | 6914..8176 | - | 1263 | WP_000608644.1 | IS1380-like element ISEc9 family transposase | - |
| SEEN550_RS00035 () | 8363..8671 | + | 309 | Protein_5 | IS1380 family transposase | - |
| SEEN550_RS00040 () | 8995..10140 | + | 1146 | WP_000976514.1 | class C beta-lactamase CMY-2 | - |
| SEEN550_RS00045 () | 10234..10767 | + | 534 | WP_001221666.1 | lipocalin family protein | - |
| SEEN550_RS00050 () | 10764..11081 | - | 318 | WP_000118520.1 | quaternary ammonium compound efflux SMR transporter SugE | - |
| SEEN550_RS00060 () | 11809..17295 | + | 5487 | WP_000606835.1 | DUF4165 domain-containing protein | - |
| SEEN550_RS00065 () | 17444..18151 | + | 708 | WP_001259346.1 | DsbC family protein | - |
| SEEN550_RS00070 () | 18148..20595 | + | 2448 | WP_000637384.1 | type IV secretion system protein TraC | - |
| SEEN550_RS00075 () | 20610..20927 | + | 318 | WP_000351984.1 | hypothetical protein | - |
| SEEN550_RS00080 () | 20924..21454 | + | 531 | WP_001010740.1 | S26 family signal peptidase | - |
| SEEN550_RS00085 () | 21417..21776 | + | 360 | Protein_14 | conjugal transfer protein TraW | - |
| SEEN550_RS00090 () | 21830..22534 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| SEEN550_RS00095 () | 22597..23301 | - | 705 | WP_001067858.1 | IS6-like element IS26 family transposase | - |
| SEEN550_RS00100 () | 23511..24500 | - | 990 | WP_001276635.1 | DUF3330 domain-containing protein | - |
| SEEN550_RS00105 () | 24497..24733 | - | 237 | WP_001087810.1 | broad-spectrum mercury transporter MerE | - |
| SEEN550_RS00110 () | 24730..25095 | - | 366 | WP_000995361.1 | mercury resistance co-regulator MerD | - |
| SEEN550_RS00115 () | 25207..25845 | - | 639 | WP_000761850.1 | organomercurial lyase MerB | - |
| SEEN550_RS00120 () | 25860..27545 | - | 1686 | WP_000149288.1 | mercury(II) reductase | - |
| SEEN550_RS00125 () | 27617..27892 | - | 276 | WP_000732290.1 | mercury resistance system periplasmic binding protein MerP | - |
| SEEN550_RS00130 () | 27908..28258 | - | 351 | WP_001294666.1 | mercuric transport protein MerT | - |
| SEEN550_RS00135 () | 28330..28764 | + | 435 | WP_000414383.1 | mercury resistance transcriptional regulator MerR | - |
| SEEN550_RS00140 () | 28864..29868 | + | 1005 | WP_000427623.1 | IS110-like element IS4321 family transposase | - |
| SEEN550_RS26020 () | 30145..30264 | + | 120 | Protein_26 | permease | - |
| SEEN550_RS26025 () | 30274..30390 | + | 117 | WP_000338626.1 | hypothetical protein | - |
| SEEN550_RS00150 () | 30511..30885 | + | 375 | WP_000868820.1 | hypothetical protein | - |
| SEEN550_RS00155 () | 30999..31724 | + | 726 | WP_000988731.1 | hypothetical protein | - |
| SEEN550_RS00165 () | 31857..36110 | + | 4254 | WP_001257735.1 | RHS domain-containing protein | - |
| SEEN550_RS00170 () | 36082..36522 | + | 441 | WP_001326394.1 | hypothetical protein | - |
| SEEN550_RS26035 () | 36693..37145 | + | 453 | Protein_32 | hypothetical protein | - |
| SEEN550_RS00180 () | 37161..37763 | - | 603 | WP_000278322.1 | hypothetical protein | - |
| SEEN550_RS00185 () | 38033..38314 | + | 282 | WP_000575657.1 | hypothetical protein | - |
| SEEN550_RS00195 () | 38613..39149 | + | 537 | WP_000949433.1 | hypothetical protein | - |
| SEEN550_RS00200 () | 39152..40162 | + | 1011 | WP_000543934.1 | tyrosine-type recombinase/integrase | - |
| SEEN550_RS00205 () | 40167..41036 | + | 870 | WP_000997323.1 | 3'-5' exonuclease | - |
| SEEN550_RS00210 () | 41033..41524 | + | 492 | WP_000139717.1 | hypothetical protein | - |
| SEEN550_RS00215 () | 41851..42726 | + | 876 | WP_001097010.1 | DNA replication terminus site-binding protein | - |
| SEEN550_RS00220 () | 42879..43919 | + | 1041 | WP_000101568.1 | DNA-binding protein | - |
| SEEN550_RS00230 () | 44206..45717 | + | 1512 | WP_000811656.1 | UvrD-helicase domain-containing protein | - |
| SEEN550_RS00235 () | 45828..46868 | + | 1041 | WP_001326396.1 | conjugal transfer protein TraF | - |
| SEEN550_RS00240 () | 46870..48303 | + | 1434 | WP_000256129.1 | conjugal transfer protein TraH | - |
| SEEN550_RS00245 () | 48316..51930 | + | 3615 | WP_000534551.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| SEEN550_RS00250 () | 51968..52330 | - | 363 | WP_000683483.1 | hypothetical protein | - |
| SEEN550_RS00255 () | 53046..53318 | + | 273 | WP_000356489.1 | helix-turn-helix domain-containing protein | - |
| SEEN550_RS00260 () | 53318..53851 | + | 534 | WP_000790610.1 | transglycosylase SLT domain-containing protein | - |
| SEEN550_RS00265 () | 53862..54470 | + | 609 | WP_000891157.1 | hypothetical protein | - |
| SEEN550_RS00270 () | 54467..55017 | + | 551 | Protein_49 | regulator | - |
| SEEN550_RS00275 () | 55077..55496 | - | 420 | WP_000651490.1 | H-NS histone family protein | - |
| SEEN550_RS00280 () | 55498..55791 | - | 294 | WP_000919078.1 | hypothetical protein | - |
| SEEN550_RS00285 () | 55808..56791 | - | 984 | WP_000077458.1 | ParM/StbA family protein | - |
| SEEN550_RS00290 () | 57290..57829 | + | 540 | WP_001447712.1 | hypothetical protein | - |
| SEEN550_RS00295 () | 57834..58121 | + | 288 | WP_000127321.1 | hypothetical protein | - |
| SEEN550_RS00300 () | 58106..59206 | + | 1101 | WP_000350011.1 | plasmid replication protein | - |
| SEEN550_RS00315 () | 60243..60677 | - | 435 | WP_000883925.1 | hypothetical protein | - |
| SEEN550_RS00320 () | 60695..61810 | - | 1116 | WP_000946102.1 | phosphoadenosine phosphosulfate reductase family protein | - |
| SEEN550_RS00325 () | 62079..62687 | + | 609 | WP_000849071.1 | hypothetical protein | - |
| SEEN550_RS00330 () | 62692..63213 | + | 522 | WP_000393785.1 | hypothetical protein | - |
| SEEN550_RS00335 () | 63216..63737 | + | 522 | WP_000805800.1 | hypothetical protein | - |
| SEEN550_RS00340 () | 63834..64307 | + | 474 | WP_000057877.1 | hypothetical protein | - |
| SEEN550_RS00345 () | 64318..64611 | + | 294 | WP_001370730.1 | hypothetical protein | - |
| SEEN550_RS00350 () | 64616..65470 | + | 855 | WP_000539392.1 | hypothetical protein | - |
| SEEN550_RS00355 () | 65470..66429 | + | 960 | WP_000829616.1 | S49 family peptidase | - |
| SEEN550_RS00360 () | 66445..67305 | + | 861 | WP_000139698.1 | DsbA family protein | - |
| SEEN550_RS00365 () | 67339..67767 | + | 429 | WP_000591074.1 | hypothetical protein | - |
| SEEN550_RS00370 () | 67824..68183 | + | 360 | WP_000422768.1 | hypothetical protein | - |
| SEEN550_RS00375 () | 68183..68629 | + | 447 | WP_000919345.1 | Fe3+-siderophore ABC transporter permease | - |
| SEEN550_RS00380 () | 68626..69144 | + | 519 | WP_000210756.1 | nitrite reductase | - |
| SEEN550_RS00385 () | 69144..69374 | + | 231 | WP_000972663.1 | hypothetical protein | - |
| SEEN550_RS00390 () | 69361..70218 | + | 858 | WP_001167032.1 | hypothetical protein | - |
| SEEN550_RS00400 () | 70449..70976 | + | 528 | WP_001236377.1 | thermonuclease family protein | - |
| SEEN550_RS00405 () | 71034..71306 | + | 273 | WP_001043047.1 | HU family DNA-binding protein | - |
| SEEN550_RS00410 () | 71394..71687 | + | 294 | WP_001239997.1 | chromosome segregation protein ParM | - |
| SEEN550_RS00415 () | 71714..72016 | - | 303 | WP_000124640.1 | XRE family transcriptional regulator | Antitoxin Detail |
| SEEN550_RS00420 () | 72021..72371 | - | 351 | WP_000270043.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| SEEN550_RS00425 () | 72534..73082 | + | 549 | WP_001061574.1 | transcriptional regulator | - |
| SEEN550_RS00435 () | 73423..73617 | + | 195 | WP_000343597.1 | hypothetical protein | - |
| SEEN550_RS00440 () | 73628..73999 | + | 372 | WP_000516916.1 | hypothetical protein | - |
| SEEN550_RS00445 () | 73992..74462 | + | 471 | WP_001281821.1 | hypothetical protein | - |
| SEEN550_RS00450 () | 74477..74812 | - | 336 | WP_000683476.1 | hypothetical protein | - |
| SEEN550_RS00455 () | 74909..75397 | + | 489 | WP_001273096.1 | DUF1643 domain-containing protein | - |
| SEEN550_RS00460 () | 75400..75897 | + | 498 | WP_000062185.1 | hypothetical protein | - |
| SEEN550_RS00465 () | 76112..76816 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| SEEN550_RS00470 () | 77123..77302 | + | 180 | Protein_85 | helix-turn-helix transcriptional regulator | - |
| SEEN550_RS00475 () | 77367..78071 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| SEEN550_RS25945 () | 78077..78217 | + | 141 | WP_001044210.1 | hypothetical protein | - |
| SEEN550_RS00485 () | 78703..79440 | + | 738 | WP_001366550.1 | recombinase family protein | - |
| SEEN550_RS00490 () | 79437..79661 | + | 225 | WP_000743213.1 | hypothetical protein | - |
| SEEN550_RS00495 () | 79872..81365 | + | 1494 | WP_001120888.1 | IS91-like element ISVsa3 family transposase | - |
| SEEN550_RS26150 () | 81834..82280 | + | 447 | Protein_91 | DUF3363 domain-containing protein | - |
| SEEN550_RS00505 () | 82497..83711 | + | 1215 | WP_000214123.1 | chloramphenicol/florfenicol efflux MFS transporter FloR | - |
| SEEN550_RS00510 () | 83739..84044 | + | 306 | WP_001255015.1 | LysR family transcriptional regulator | - |
| SEEN550_RS00515 () | 84156..84344 | + | 189 | Protein_94 | IS91 family transposase | - |
| SEEN550_RS00520 () | 84311..85510 | - | 1200 | WP_000804063.1 | tetracycline efflux MFS transporter Tet(A) | - |
| SEEN550_RS00525 () | 85616..86266 | + | 651 | WP_000164043.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| SEEN550_RS00530 () | 86298..86540 | - | 243 | WP_000844627.1 | transposase | - |
| SEEN550_RS00540 () | 86846..87682 | - | 837 | WP_000480968.1 | aminoglycoside O-phosphotransferase APH(6)-Id | - |
| SEEN550_RS00545 () | 87682..88485 | - | 804 | WP_001082319.1 | aminoglycoside O-phosphotransferase APH(3'')-Ib | - |
| SEEN550_RS00550 () | 88546..89361 | - | 816 | WP_001043260.1 | sulfonamide-resistant dihydropteroate synthase Sul2 | - |
| SEEN550_RS00560 () | 89668..89979 | + | 312 | WP_000338945.1 | hypothetical protein | - |
| SEEN550_RS00565 () | 90153..90938 | + | 786 | WP_001151304.1 | ParA family protein | - |
| SEEN550_RS00570 () | 90942..92123 | + | 1182 | WP_001207227.1 | ParB/RepB/Spo0J family partition protein | - |
| SEEN550_RS00575 () | 92172..92444 | + | 273 | WP_000703827.1 | helix-turn-helix domain-containing protein | - |
| SEEN550_RS00580 () | 92497..93132 | - | 636 | WP_000074431.1 | N-6 DNA methylase | - |
| SEEN550_RS25950 () | 93224..93367 | - | 144 | WP_000939033.1 | hypothetical protein | - |
| SEEN550_RS00585 () | 93694..94071 | + | 378 | WP_001125904.1 | hypothetical protein | - |
| SEEN550_RS26095 () | 94064..94345 | + | 282 | WP_000044823.1 | hypothetical protein | - |
| SEEN550_RS00595 () | 94320..94994 | + | 675 | WP_000344149.1 | hypothetical protein | - |
| SEEN550_RS00600 () | 95062..95493 | + | 432 | WP_001326170.1 | hypothetical protein | - |
| SEEN550_RS00605 () | 95499..95810 | + | 312 | WP_001447539.1 | hypothetical protein | - |
| SEEN550_RS00610 () | 95819..96319 | + | 501 | WP_000647188.1 | hypothetical protein | - |
| SEEN550_RS00615 () | 96323..97750 | + | 1428 | WP_000936897.1 | DNA cytosine methyltransferase | - |
| SEEN550_RS00620 () | 97750..98406 | + | 657 | WP_000268552.1 | hypothetical protein | - |
| SEEN550_RS00625 () | 98462..99079 | + | 618 | WP_000464630.1 | hypothetical protein | - |
| SEEN550_RS00635 () | 99291..99590 | + | 300 | WP_001326171.1 | hypothetical protein | - |
| SEEN550_RS00640 () | 99681..100169 | - | 489 | WP_000467110.1 | hypothetical protein | - |
| SEEN550_RS00645 () | 100184..102376 | - | 2193 | WP_000366823.1 | DNA topoisomerase 3 | - |
| SEEN550_RS00650 () | 102376..102609 | - | 234 | WP_001191890.1 | hypothetical protein | - |
| SEEN550_RS00655 () | 102591..103208 | - | 618 | WP_001249395.1 | hypothetical protein | - |
| SEEN550_RS00660 () | 103376..106348 | + | 2973 | WP_001326173.1 | TraI domain-containing protein | - |
| SEEN550_RS00665 () | 106345..108210 | + | 1866 | WP_000178857.1 | conjugative transfer system coupling protein TraD | - |
| SEEN550_RS00670 () | 108221..108805 | + | 585 | WP_000332868.1 | hypothetical protein | - |
| SEEN550_RS00675 () | 108762..109391 | + | 630 | WP_000743449.1 | DUF4400 domain-containing protein | - |
| SEEN550_RS00680 () | 109401..109847 | + | 447 | WP_000122507.1 | hypothetical protein | - |
| SEEN550_RS00685 () | 109857..110234 | + | 378 | WP_000869297.1 | hypothetical protein | - |
| SEEN550_RS00690 () | 110234..110896 | + | 663 | WP_001231464.1 | hypothetical protein | - |
| SEEN550_RS00695 () | 111220..111597 | + | 378 | WP_001326174.1 | hypothetical protein | - |
| SEEN550_RS00700 () | 111742..112023 | + | 282 | WP_000805625.1 | type IV conjugative transfer system protein TraL | - |
| SEEN550_RS00705 () | 112020..112646 | + | 627 | WP_001049717.1 | hypothetical protein | - |
| SEEN550_RS00710 () | 112630..113547 | + | 918 | WP_000794249.1 | type-F conjugative transfer system secretin TraK | - |
| SEEN550_RS00715 () | 113547..114860 | + | 1314 | WP_024131605.1 | conjugal transfer protein TraB | - |
| SEEN550_RS00720 () | 114857..115435 | + | 579 | WP_000793435.1 | type IV conjugative transfer system lipoprotein TraV | - |
| SEEN550_RS00725 () | 115439..115831 | + | 393 | WP_000479535.1 | hypothetical protein | - |
| SEEN550_RS00730 () | 116116..117075 | + | 960 | Protein_135 | IS1380-like element ISEc9 family transposase | - |
| SEEN550_RS00735 () | 117075..117776 | - | 702 | Protein_136 | conjugal transfer protein TraC | - |
| SEEN550_RS00740 () | 117773..118480 | - | 708 | WP_001259346.1 | DsbC family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|