MGE detailed information
MGE type: Genomic_island MGE length: 9626 bp
Accession: NZ_CP009533 Location: 4429380..4439005 Organism: Pseudomonas rhizosphaerae strain DSM 16299 Replicon: chromosome
Accession: NZ_CP009533 Location: 4429380..4439005 Organism: Pseudomonas rhizosphaerae strain DSM 16299 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LT40_RS19620 () | 4424566..4425330 | - | 765 | WP_043192840.1 | hypothetical protein | - |
| LT40_RS19625 () | 4425414..4425659 | + | 246 | WP_043192842.1 | hypothetical protein | - |
| LT40_RS19630 () | 4425715..4425894 | - | 180 | WP_043192844.1 | hypothetical protein | - |
| LT40_RS19635 () | 4426019..4426237 | + | 219 | WP_043192846.1 | hypothetical protein | - |
| LT40_RS19640 () | 4426498..4427097 | + | 600 | WP_043192848.1 | LemA family protein | - |
| LT40_RS19645 () | 4427094..4427861 | + | 768 | WP_043192850.1 | TPM domain-containing protein | - |
| LT40_RS19650 () | 4427880..4428497 | + | 618 | WP_043192853.1 | TPM domain-containing protein | - |
| LT40_RS19655 () | 4428588..4429361 | + | 774 | WP_043192855.1 | EAL domain-containing protein | - |
| LT40_RS19660 () | 4429380..4429736 | - | 357 | WP_043192857.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| LT40_RS19665 () | 4429733..4429984 | - | 252 | WP_043192859.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| LT40_RS19670 () | 4430195..4430779 | - | 585 | WP_043192861.1 | SMI1/KNR4 family protein | - |
| LT40_RS19675 () | 4431007..4431261 | - | 255 | WP_043192863.1 | hypothetical protein | - |
| LT40_RS19680 () | 4431306..4432154 | - | 849 | WP_043192866.1 | carboxylating nicotinate-nucleotide diphosphorylase | - |
| LT40_RS19685 () | 4432432..4434654 | + | 2223 | WP_043193853.1 | DUF1631 domain-containing protein | - |
| LT40_RS19690 () | 4434736..4435299 | + | 564 | WP_043192868.1 | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | - |
| LT40_RS19695 () | 4435296..4436132 | + | 837 | WP_043192870.1 | regulatory signaling modulator protein AmpE | - |
| LT40_RS21000 () | 4436639..4437352 | + | 714 | WP_052393485.1 | hypothetical protein | - |
| LT40_RS21650 () | 4437368..4439005 | + | 1638 | WP_148308589.1 | hypothetical protein | - |
| LT40_RS19715 () | 4439160..4439948 | - | 789 | WP_043192876.1 | TatD family hydrolase | - |
| LT40_RS19720 () | 4439951..4440946 | - | 996 | WP_043192878.1 | catabolite repressor/activator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|