MGE detailed information
MGE type: Genomic_island MGE length: 32426 bp
Accession: NZ_CP009104 Location: 471399..503824 Organism: Escherichia coli strain RM9387 Replicon: chromosome
Accession: NZ_CP009104 Location: 471399..503824 Organism: Escherichia coli strain RM9387 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HW42_RS02220 () | 466581..467921 | - | 1341 | WP_000899522.1 | anaerobic C4-dicarboxylate transporter DcuB | - |
| HW42_RS02230 () | 468492..469211 | - | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
| HW42_RS02235 () | 469208..470839 | - | 1632 | WP_001216486.1 | sensor histidine kinase | - |
| HW42_RS27590 () | 470968..471719 | - | 752 | Protein_401 | IS3 family transposase | - |
| HW42_RS02255 () | 472122..472694 | + | 573 | WP_000661408.1 | hypothetical protein | - |
| HW42_RS02260 () | 472733..473953 | + | 1221 | WP_001150579.1 | HlyD family efflux transporter periplasmic adaptor subunit | - |
| HW42_RS02265 () | 473946..476096 | + | 2151 | WP_039264332.1 | peptidase domain-containing ABC transporter | - |
| HW42_RS25425 () | 476148..476378 | - | 231 | WP_136731090.1 | IS3 family transposase | - |
| HW42_RS27595 () | 476838..476954 | - | 117 | Protein_406 | IS3 family transposase ISKpn1 | Transposase |
| HW42_RS02275 () | 477034..477552 | - | 519 | WP_000565927.1 | hypothetical protein | - |
| HW42_RS02280 () | 477545..477982 | - | 438 | WP_100224274.1 | Chitooligosaccharide deacetylase ChbG | VF |
| HW42_RS02285 () | 478080..479075 | - | 996 | WP_001395679.1 | hypothetical protein | - |
| HW42_RS02290 () | 479095..479796 | - | 702 | WP_000162908.1 | Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase | VF |
| HW42_RS02295 () | 479789..482146 | - | 2358 | WP_000695774.1 | putative glycosyltransferase | VF |
| HW42_RS02300 () | 482215..482748 | - | 534 | WP_000733565.1 | hypothetical protein | VF |
| HW42_RS02305 () | 483098..486934 | + | 3837 | WP_039264333.1 | hypothetical protein | VF |
| HW42_RS02310 () | 487841..488671 | + | 831 | WP_001088100.1 | AraC family transcriptional regulator | - |
| HW42_RS02315 () | 489832..493761 | + | 3930 | WP_001542592.1 | Putative short-chain fatty acid transporter | VF |
| HW42_RS02320 () | 493974..494246 | + | 273 | WP_000405647.1 | N-acetyltransferase | - |
| HW42_RS02330 () | 494473..494769 | + | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| HW42_RS02335 () | 494797..494970 | + | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| HW42_RS02340 () | 495089..496606 | - | 1518 | WP_001295087.1 | lysine--tRNA ligase | - |
| HW42_RS02345 () | 496843..498300 | - | 1458 | WP_000856834.1 | dipeptide/tripeptide permease DtpC | - |
| HW42_RS02350 () | 498359..500506 | - | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| HW42_RS02355 () | 500586..501920 | - | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| HW42_RS02360 () | 502286..503824 | - | 1539 | WP_001187170.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| HW42_RS02370 () | 504623..505198 | - | 576 | WP_001188520.1 | transcriptional regulator | - |
| HW42_RS02375 () | 505235..506932 | - | 1698 | WP_000068978.1 | protein-disulfide reductase DsbD | - |
| HW42_RS02380 () | 506908..507246 | - | 339 | WP_000883400.1 | divalent cation tolerance protein CutA | - |
| HW42_RS02385 () | 507362..508663 | - | 1302 | WP_000961959.1 | anaerobic C4-dicarboxylate transporter DcuA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|