MGE detailed information
MGE type: Genomic_island MGE length: 11456 bp
Accession: NZ_CP009104 Location: 4222740..4234195 Organism: Escherichia coli strain RM9387 Replicon: chromosome
Accession: NZ_CP009104 Location: 4222740..4234195 Organism: Escherichia coli strain RM9387 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HW42_RS21010 () | 4219065..4220273 | - | 1209 | WP_001297162.1 | propionate kinase | - |
| HW42_RS21015 () | 4220299..4221630 | - | 1332 | WP_000107720.1 | threonine/serine transporter TdcC | - |
| HW42_RS21020 () | 4221652..4222641 | - | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| HW42_RS21025 () | 4222740..4223678 | - | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| HW42_RS28365 () | 4223993..4224211 | + | 219 | WP_001390702.1 | transcriptional activator TdcR | - |
| HW42_RS21035 () | 4224467..4225006 | + | 540 | WP_000675746.1 | hypothetical protein | - |
| HW42_RS21040 () | 4225028..4226215 | + | 1188 | WP_001543175.1 | YhaC family protein | - |
| HW42_RS21045 () | 4227019..4228164 | - | 1146 | WP_001299416.1 | glycerate 2-kinase | - |
| HW42_RS21050 () | 4228261..4229151 | - | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| HW42_RS21055 () | 4229181..4229951 | - | 771 | WP_001058227.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| HW42_RS21060 () | 4229967..4231301 | - | 1335 | WP_000599636.1 | galactarate/glucarate/glycerate transporter GarP | - |
| HW42_RS21070 () | 4231676..4233247 | + | 1572 | WP_001273741.1 | galactarate dehydratase | - |
| HW42_RS21075 () | 4233396..4233731 | + | 336 | WP_001307405.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| HW42_RS21080 () | 4233731..4234195 | + | 465 | WP_000347267.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| HW42_RS21085 () | 4234250..4235059 | - | 810 | WP_000072187.1 | aga operon transcriptional regulator AgaR | - |
| HW42_RS21090 () | 4235308..4236588 | + | 1281 | WP_000681920.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| HW42_RS21095 () | 4236611..4237084 | + | 474 | WP_001295547.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| HW42_RS21100 () | 4237095..4237874 | + | 780 | WP_000406214.1 | PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC | - |
| HW42_RS21105 () | 4237864..4238742 | + | 879 | WP_001295548.1 | PTS system mannose/fructose/sorbose family transporter subunit IID | - |
| HW42_RS21110 () | 4238760..4239194 | + | 435 | WP_000948824.1 | PTS sugar transporter subunit IIA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|