MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 143193 bp
Accession: NZ_CP009050 Location: 3629173..3772365 Organism: Escherichia coli NCCP15648 Replicon: chromosome
Accession: NZ_CP009050 Location: 3629173..3772365 Organism: Escherichia coli NCCP15648 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A610_RS19315 () | 3624849..3625829 | + | 981 | WP_001273465.1 | ATP-binding protein | - |
| A610_RS19320 () | 3625839..3628226 | + | 2388 | WP_000126413.1 | S8 family peptidase | - |
| A610_RS19325 () | 3628236..3629864 | + | 1629 | WP_000105162.1 | site-specific DNA-methyltransferase | - |
| A610_RS19330 () | 3629867..3632737 | + | 2871 | WP_000081335.1 | DEAD/DEAH box helicase family protein | - |
| A610_RS19335 () | 3632826..3633119 | + | 294 | WP_001091149.1 | hypothetical protein | - |
| A610_RS19340 () | 3633189..3633446 | + | 258 | Protein_3542 | IS3 family transposase | - |
| A610_RS19345 () | 3633459..3634610 | - | 1152 | WP_001254936.1 | IS30-like element IS30 family transposase | - |
| A610_RS19350 () | 3634675..3635100 | + | 426 | Protein_3544 | IS3 family transposase | - |
| A610_RS19360 () | 3635773..3637281 | + | 1509 | WP_001189118.1 | group II intron reverse transcriptase/maturase | - |
| A610_RS19365 () | 3637416..3637580 | + | 165 | Protein_3546 | IS3 family transposase | - |
| A610_RS19375 () | 3637823..3638899 | + | 1077 | WP_000227970.1 | IS110 family transposase | - |
| A610_RS19380 () | 3638916..3639224 | + | 309 | Protein_3548 | DDE-type integrase/transposase/recombinase | - |
| A610_RS19390 () | 3639686..3643804 | + | 4119 | WP_001045650.1 | serine protease autotransporter toxin Pic | - |
| A610_RS19395 () | 3643955..3644197 | - | 243 | Protein_3550 | IS256 family transposase | - |
| A610_RS19400 () | 3644236..3644688 | - | 453 | Protein_3551 | transposase | - |
| A610_RS19405 () | 3644776..3645210 | + | 435 | WP_001309734.1 | IS66 family insertion sequence hypothetical protein | - |
| A610_RS19410 () | 3645207..3645557 | + | 351 | WP_000624688.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| A610_RS19415 () | 3645588..3647012 | + | 1425 | Protein_3554 | IS66-like element ISEc43 family transposase | - |
| A610_RS19420 () | 3647266..3648399 | - | 1134 | WP_000555401.1 | IS110-like element ISEc45 family transposase | - |
| A610_RS19425 () | 3648460..3648648 | + | 189 | Protein_3556 | IS66 family transposase | - |
| A610_RS19430 () | 3648834..3648977 | - | 144 | Protein_3557 | integrase core domain-containing protein | - |
| A610_RS19435 () | 3648981..3649343 | - | 363 | WP_077577697.1 | IS3 family transposase | - |
| A610_RS19440 () | 3649383..3650516 | - | 1134 | WP_000555380.1 | IS110 family transposase | - |
| A610_RS19445 () | 3650577..3650765 | + | 189 | Protein_3560 | IS66 family transposase | - |
| A610_RS19450 () | 3650795..3650965 | + | 171 | Protein_3561 | ATP-dependent helicase | - |
| A610_RS19460 () | 3651831..3652985 | - | 1155 | WP_000359994.1 | type VI secretion system ImpA family N-terminal domain-containing protein | - |
| A610_RS19465 () | 3653119..3653399 | - | 281 | Protein_3563 | transposase | - |
| A610_RS30505 () | 3653464..3654030 | - | 567 | WP_000587872.1 | hypothetical protein | - |
| A610_RS19490 () | 3657054..3657527 | - | 474 | Protein_3566 | DDE-type integrase/transposase/recombinase | - |
| A610_RS19495 () | 3657617..3659125 | - | 1509 | WP_001189118.1 | group II intron reverse transcriptase/maturase | - |
| A610_RS19505 () | 3659798..3660535 | - | 738 | Protein_3568 | IS3 family transposase | - |
| A610_RS19510 () | 3660732..3663281 | - | 2550 | WP_000029846.1 | type VI secretion system ATPase TssH | - |
| A610_RS19515 () | 3663285..3666689 | - | 3405 | WP_000914956.1 | type VI secretion protein | - |
| A610_RS19520 () | 3666695..3667285 | - | 591 | WP_001028113.1 | DotU family type IV/VI secretion system protein | - |
| A610_RS19530 () | 3667624..3669036 | - | 1413 | WP_001154665.1 | type VI secretion system baseplate subunit TssK | - |
| A610_RS19535 () | 3669055..3669606 | - | 552 | WP_000152746.1 | type VI secretion lipoprotein TssJ | - |
| A610_RS19540 () | 3669614..3670690 | - | 1077 | WP_001033155.1 | type VI secretion system protein TssA | - |
| A610_RS19545 () | 3670694..3670993 | - | 300 | WP_001390299.1 | PAAR domain-containing protein | - |
| A610_RS19550 () | 3671003..3671470 | - | 468 | WP_000005080.1 | hypothetical protein | - |
| A610_RS19555 () | 3671481..3673463 | - | 1983 | WP_000198270.1 | type VI secretion system tip protein VgrG | - |
| A610_RS19560 () | 3673476..3674408 | - | 933 | WP_001173975.1 | type VI secretion system baseplate subunit TssG | - |
| A610_RS19565 () | 3674399..3676201 | - | 1803 | WP_001390300.1 | type VI secretion system baseplate subunit TssF | - |
| A610_RS19570 () | 3676194..3676616 | - | 423 | WP_000555547.1 | hypothetical protein | - |
| A610_RS19575 () | 3676626..3677132 | - | 507 | WP_000233190.1 | type VI secretion system protein AaiC/Hcp2 | - |
| A610_RS19580 () | 3677142..3678620 | - | 1479 | WP_000215053.1 | type VI secretion system contractile sheath large subunit | - |
| A610_RS19585 () | 3678623..3679099 | - | 477 | WP_000072549.1 | type VI secretion system contractile sheath small subunit | - |
| A610_RS19590 () | 3679495..3680511 | + | 1017 | Protein_3584 | IS630 family transposase | - |
| A610_RS19595 () | 3680517..3680642 | - | 126 | WP_001420591.1 | hypothetical protein | - |
| A610_RS19600 () | 3680620..3681006 | - | 387 | WP_014966195.1 | hypothetical protein | - |
| A610_RS19605 () | 3680999..3681205 | - | 207 | WP_001152049.1 | hypothetical protein | - |
| A610_RS19610 () | 3681216..3681795 | + | 580 | Protein_3588 | transposase | - |
| A610_RS19615 () | 3681826..3682149 | - | 324 | WP_001387054.1 | hypothetical protein | - |
| A610_RS19620 () | 3682215..3682859 | - | 645 | WP_001387055.1 | hypothetical protein | - |
| A610_RS19625 () | 3682880..3683149 | - | 270 | WP_000226517.1 | PerC family transcriptional regulator | - |
| A610_RS19630 () | 3683228..3683395 | - | 168 | Protein_3592 | transcriptional regulator | - |
| A610_RS19635 () | 3683510..3683815 | - | 306 | WP_001420595.1 | hypothetical protein | - |
| A610_RS19640 () | 3683880..3685625 | - | 1746 | WP_001390303.1 | AAA family ATPase | - |
| A610_RS19645 () | 3685861..3687105 | - | 1245 | WP_000897032.1 | GIY-YIG nuclease family protein | - |
| A610_RS19650 () | 3687207..3688568 | - | 1362 | WP_000930193.1 | type VI secretion system contractile sheath large subunit | - |
| A610_RS19655 () | 3688590..3689087 | - | 498 | WP_000098939.1 | type VI secretion system contractile sheath small subunit | - |
| A610_RS19660 () | 3689594..3689785 | + | 192 | WP_001287796.1 | DUF4222 domain-containing protein | - |
| A610_RS19665 () | 3689838..3690071 | - | 234 | WP_000124181.1 | hypothetical protein | - |
| A610_RS19670 () | 3690167..3690790 | - | 624 | WP_001260266.1 | hypothetical protein | - |
| A610_RS19675 () | 3690911..3691093 | - | 183 | WP_001216313.1 | hypothetical protein | - |
| A610_RS19680 () | 3691099..3691518 | - | 420 | WP_001387059.1 | hypothetical protein | - |
| A610_RS19685 () | 3691508..3691891 | - | 384 | WP_000271022.1 | hypothetical protein | - |
| A610_RS30235 () | 3691863..3692021 | - | 159 | WP_000493525.1 | hypothetical protein | - |
| A610_RS19690 () | 3692059..3692628 | - | 570 | WP_000220727.1 | inovirus Gp2 family protein | - |
| A610_RS30240 () | 3692832..3693005 | + | 174 | WP_001387062.1 | hypothetical protein | - |
| A610_RS19700 () | 3693245..3693457 | - | 213 | WP_000453331.1 | hemolysin expression modulator Hha | - |
| A610_RS19705 () | 3694156..3694362 | + | 207 | WP_001095912.1 | AlpA family transcriptional regulator | - |
| A610_RS19710 () | 3694448..3695020 | + | 573 | WP_001170560.1 | hypothetical protein | - |
| A610_RS19720 () | 3695229..3695336 | + | 108 | Protein_3610 | IS1 family transposase | - |
| A610_RS19735 () | 3696515..3697534 | + | 1020 | WP_001388379.1 | hypothetical protein | - |
| A610_RS19740 () | 3697644..3698516 | + | 873 | WP_001069724.1 | GTPase family protein | - |
| A610_RS19745 () | 3698850..3701969 | + | 3120 | WP_000820379.1 | autotransporter adhesin Ag43 | - |
| A610_RS19750 () | 3702090..3704606 | + | 2517 | WP_001387066.1 | membrane protein | - |
| A610_RS19755 () | 3704682..3705137 | + | 456 | WP_000581502.1 | hypothetical protein | - |
| A610_RS19760 () | 3705216..3705449 | + | 234 | WP_001119729.1 | DUF905 family protein | - |
| A610_RS19770 () | 3705549..3706367 | + | 819 | WP_001234605.1 | DUF945 domain-containing protein | - |
| A610_RS19780 () | 3706669..3707142 | + | 474 | WP_000855081.1 | antirestriction protein | - |
| A610_RS19785 () | 3707158..3707634 | + | 477 | WP_001388380.1 | RadC family protein | - |
| A610_RS19790 () | 3707721..3707942 | + | 222 | WP_000692350.1 | DUF987 domain-containing protein | - |
| A610_RS19795 () | 3708022..3708399 | + | 378 | WP_001285617.1 | type IV toxin-antitoxin system toxin CbtA | Antitoxin Detail |
| A610_RS19800 () | 3708446..3708823 | + | 378 | WP_001094429.1 | TA system toxin CbtA family protein | Toxin Detail |
| A610_RS19805 () | 3708820..3709017 | + | 198 | Protein_3623 | hypothetical protein | - |
| A610_RS19810 () | 3709045..3709242 | + | 198 | WP_085949090.1 | DUF957 domain-containing protein | - |
| A610_RS19815 () | 3709327..3710169 | + | 843 | WP_001280493.1 | DUF4942 domain-containing protein | - |
| A610_RS19820 () | 3710450..3710986 | - | 537 | WP_000942795.1 | GspM family type II secretion system protein YghD | - |
| A610_RS19825 () | 3710988..3712166 | - | 1179 | WP_000094962.1 | type II secretion system protein GspL | - |
| A610_RS19830 () | 3712163..3713140 | - | 978 | WP_000633238.1 | type II secretion system minor pseudopilin GspK | - |
| A610_RS19835 () | 3713143..3713742 | - | 600 | WP_001255040.1 | type II secretion system minor pseudopilin GspJ | - |
| A610_RS19840 () | 3713739..3714110 | - | 372 | WP_000820125.1 | type II secretion system minor pseudopilin GspI | - |
| A610_RS19845 () | 3714107..3714670 | - | 564 | WP_001115140.1 | type II secretion system minor pseudopilin GspH | - |
| A610_RS19850 () | 3714674..3715129 | - | 456 | WP_001087296.1 | type II secretion system major pseudopilin GspG | - |
| A610_RS19855 () | 3715146..3716369 | - | 1224 | WP_001173453.1 | type II secretion system inner membrane protein GspF | - |
| A610_RS19860 () | 3716369..3717862 | - | 1494 | WP_000249348.1 | type II secretion system ATPase GspE | - |
| A610_RS19865 () | 3717862..3719922 | - | 2061 | WP_000498829.1 | type II secretion system secretin GspD | - |
| A610_RS19870 () | 3719952..3720911 | - | 960 | WP_000135063.1 | type II secretion system protein GspC | - |
| A610_RS19875 () | 3720929..3721339 | - | 411 | WP_001324279.1 | type II secretion system pilot lipoprotein GspS-beta | - |
| A610_RS19880 () | 3721405..3722214 | - | 810 | WP_001365924.1 | prepilin peptidase PppA | - |
| A610_RS19885 () | 3722354..3726919 | - | 4566 | WP_001034491.1 | lipoprotein metalloprotease SslE | - |
| A610_RS19895 () | 3727405..3729087 | - | 1683 | WP_000259303.1 | glycolate permease GlcA | - |
| A610_RS19900 () | 3729443..3731614 | - | 2172 | WP_000084080.1 | malate synthase G | - |
| A610_RS19905 () | 3731636..3732040 | - | 405 | WP_000853256.1 | protein GlcG | - |
| A610_RS19910 () | 3732045..3733268 | - | 1224 | WP_001194680.1 | glycolate oxidase subunit GlcF | - |
| A610_RS19915 () | 3733279..3734331 | - | 1053 | WP_000943059.1 | glycolate oxidase subunit GlcE | - |
| A610_RS19920 () | 3734331..3735830 | - | 1500 | WP_000026117.1 | glycolate oxidase subunit GlcD | - |
| A610_RS19925 () | 3736081..3736845 | + | 765 | WP_001297764.1 | transcriptional regulator GlcC | - |
| A610_RS19930 () | 3736852..3737994 | - | 1143 | WP_000388786.1 | DNA-binding protein | - |
| A610_RS19940 () | 3738365..3740086 | + | 1722 | WP_001390306.1 | fatty acyl-AMP ligase | - |
| A610_RS19945 () | 3740083..3740997 | + | 915 | WP_001077177.1 | NAD-dependent epimerase/dehydratase family protein | - |
| A610_RS19950 () | 3741029..3741277 | + | 249 | WP_000248097.1 | acyl carrier protein | - |
| A610_RS19955 () | 3741277..3742449 | + | 1173 | WP_000524972.1 | aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme | - |
| A610_RS19960 () | 3742484..3743563 | - | 1080 | WP_001307395.1 | LPS export ABC transporter permease LptG | - |
| A610_RS19965 () | 3743560..3744630 | - | 1071 | WP_000779661.1 | LPS export ABC transporter permease LptF | - |
| A610_RS19970 () | 3744661..3745221 | - | 561 | WP_001299422.1 | YtfJ family protein | - |
| A610_RS19975 () | 3745233..3746057 | - | 825 | WP_000984978.1 | hypothetical protein | - |
| A610_RS19980 () | 3746057..3747406 | - | 1350 | WP_000896880.1 | lipopolysaccharide biosynthesis protein | - |
| A610_RS19985 () | 3747452..3748210 | - | 759 | WP_000339532.1 | hypothetical protein | - |
| A610_RS19990 () | 3748242..3748955 | - | 714 | WP_001076097.1 | thymidylate kinase | - |
| A610_RS19995 () | 3749129..3749821 | + | 693 | WP_001190780.1 | thymidylate kinase | - |
| A610_RS20000 () | 3749870..3751369 | - | 1500 | WP_000933258.1 | inorganic phosphate transporter PitB | - |
| A610_RS20005 () | 3751661..3753520 | - | 1860 | WP_001297309.1 | bifunctional glutathionylspermidine amidase/synthase | - |
| A610_RS20010 () | 3753725..3754591 | + | 867 | WP_001387074.1 | glutathione-dependent disulfide-bond oxidoreductase | - |
| A610_RS20015 () | 3754715..3754963 | - | 249 | WP_000334896.1 | hydrogenase maturation factor HybG | - |
| A610_RS20020 () | 3754976..3755317 | - | 342 | WP_000544953.1 | hydrogenase maturation nickel metallochaperone HypA | - |
| A610_RS20025 () | 3755310..3755798 | - | 489 | WP_000134014.1 | hydrogenase-2 assembly chaperone | - |
| A610_RS20030 () | 3755791..3756285 | - | 495 | WP_001221953.1 | HyaD/HybD family hydrogenase maturation endopeptidase | - |
| A610_RS20035 () | 3756285..3757988 | - | 1704 | WP_000083065.1 | hydrogenase 2 large subunit | - |
| A610_RS20040 () | 3757985..3759163 | - | 1179 | WP_000017703.1 | Ni/Fe-hydrogenase cytochrome b subunit | - |
| A610_RS20045 () | 3759153..3760139 | - | 987 | WP_001081870.1 | hydrogenase 2 operon protein HybA | - |
| A610_RS20050 () | 3760142..3761260 | - | 1119 | WP_000145410.1 | hydrogenase 2 small subunit | - |
| A610_RS20060 () | 3761449..3761736 | - | 288 | WP_001059136.1 | DUF2623 domain-containing protein | - |
| A610_RS20065 () | 3761855..3762742 | - | 888 | WP_001297303.1 | dienelactone hydrolase family protein | - |
| A610_RS20070 () | 3762899..3763939 | + | 1041 | WP_000262151.1 | L-glyceraldehyde 3-phosphate reductase | - |
| A610_RS20075 () | 3763979..3764473 | - | 495 | WP_000439331.1 | TIGR00645 family protein | - |
| A610_RS20080 () | 3764664..3765548 | + | 885 | WP_000018758.1 | NADP(+)-dependent aldehyde reductase | - |
| A610_RS20085 () | 3765587..3766012 | - | 426 | WP_001240712.1 | TonB system transport protein ExbD | - |
| A610_RS20090 () | 3766019..3766753 | - | 735 | WP_000527844.1 | tol-pal system-associated acyl-CoA thioesterase | - |
| A610_RS20100 () | 3767005..3768192 | + | 1188 | WP_001315867.1 | cystathionine beta-lyase | - |
| A610_RS20105 () | 3768332..3768991 | + | 660 | WP_000268419.1 | DedA family protein | - |
| A610_RS20110 () | 3769031..3769930 | - | 900 | WP_024174618.1 | DNA-binding transcriptional regulator YqhC | - |
| A610_RS20115 () | 3770124..3771287 | + | 1164 | WP_001058807.1 | alcohol dehydrogenase | - |
| A610_RS20120 () | 3771392..3772219 | + | 828 | WP_000013149.1 | 2,5-didehydrogluconate reductase DkgA | - |
| A610_RS20125 () | 3772419..3773345 | + | 927 | WP_000691598.1 | YbjP/YqhG family protein | - |
| A610_RS20130 () | 3773396..3773653 | + | 258 | WP_000848528.1 | lipoprotein YqhH | - |
| A610_RS20135 () | 3773696..3775915 | - | 2220 | WP_000095187.1 | YgiQ family radical SAM protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|