MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 28753 bp
Accession: NZ_CP009026 Location: 1..28753 Organism: Xanthomonas citri pv. citri strain 5208 Replicon: plasmid pXAC33
Accession: NZ_CP009026 Location: 1..28753 Organism: Xanthomonas citri pv. citri strain 5208 Replicon: plasmid pXAC33
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AMD17_RS00010 () | 68..1155 | + | 1088 | WP_087943923.1 | IS3 family transposase ISXac2 | Transposase |
| AMD17_RS22520 () | 1121..1750 | - | 630 | WP_011052932.1 | Tn3 family transposase ISPsy42 | Transposase |
| AMD17_RS00020 () | 1930..2181 | + | 252 | WP_003108276.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | - |
| AMD17_RS00025 () | 2178..2573 | + | 396 | WP_015463818.1 | type II toxin-antitoxin system VapC family toxin | - |
| AMD17_RS00030 () | 2734..3111 | - | 378 | WP_004666662.1 | hypothetical protein | - |
| AMD17_RS22525 () | 3170..3415 | - | 246 | Protein_5 | IS3 family transposase ISStma14 | Transposase |
| AMD17_RS22530 () | 3528..3800 | + | 273 | WP_005934628.1 | hypothetical protein | - |
| AMD17_RS25145 () | 3942..4115 | - | 174 | WP_011052974.1 | hypothetical protein | - |
| AMD17_RS00035 () | 4115..4510 | - | 396 | WP_011052973.1 | hypothetical protein | - |
| AMD17_RS00040 () | 4858..5304 | + | 447 | WP_011052937.1 | hypothetical protein | - |
| AMD17_RS00045 () | 5301..6010 | + | 710 | Protein_10 | plasmid stabilization protein | - |
| AMD17_RS00050 () | 6059..6412 | + | 354 | WP_039700904.1 | hypothetical protein | - |
| AMD17_RS22535 () | 6807..7016 | - | 210 | WP_015462608.1 | helix-turn-helix domain-containing protein | - |
| AMD17_RS00055 () | 7013..7321 | - | 309 | WP_015462607.1 | hypothetical protein | - |
| AMD17_RS00060 () | 7777..8403 | + | 627 | WP_005931726.1 | Chromosome-partitioning ATPase Soj | VF |
| AMD17_RS00065 () | 8400..8723 | + | 324 | WP_005918229.1 | hypothetical protein | - |
| AMD17_RS00070 () | 8868..9182 | + | 315 | WP_005918227.1 | hypothetical protein | - |
| AMD17_RS00075 () | 9430..10650 | + | 1221 | WP_011052942.1 | replication initiation protein | - |
| AMD17_RS00080 () | 11016..14396 | - | 3381 | WP_011052943.1 | TAL effector repeat-containing protein | - |
| AMD17_RS24635 () | 14642..14863 | - | 222 | WP_011052944.1 | hypothetical protein | - |
| AMD17_RS00095 () | 15153..15689 | - | 537 | WP_015463823.1 | plasmid pRiA4b ORF-3 family protein | - |
| AMD17_RS00100 () | 15679..15891 | - | 213 | WP_011052947.1 | hypothetical protein | - |
| AMD17_RS24640 () | 15888..16139 | - | 252 | WP_125459571.1 | hypothetical protein | - |
| AMD17_RS00105 () | 16162..16494 | - | 333 | WP_015463824.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| AMD17_RS00110 () | 16494..16751 | - | 258 | WP_011052949.1 | antitoxin | Antitoxin Detail |
| AMD17_RS00115 () | 16957..17559 | + | 603 | WP_011052950.1 | Tn3 family transposase TnpR_ISPsy30 | Transposase |
| AMD17_RS22550 () | 17543..17847 | + | 305 | Protein_26 | Tn3 family transposase TnpA_ISPsy30 | Transposase |
| AMD17_RS00120 () | 18014..18220 | - | 207 | Protein_27 | Tn3 family transposase TnpA_TnXo19 | Transposase |
| AMD17_RS22555 () | 18265..18834 | - | 570 | Protein_28 | UPF0149 family protein | - |
| AMD17_RS00125 () | 18853..20067 | - | 1215 | WP_011050083.1 | IS4 family transposase ISXac1 | Transposase |
| AMD17_RS24645 () | 20141..20323 | - | 183 | Protein_30 | UPF0149 family protein | - |
| AMD17_RS00130 () | 20342..23317 | - | 2976 | Protein_31 | Tn3 family transposase TnpA_ISXc4 | Transposase |
| AMD17_RS00140 () | 23322..23741 | - | 420 | WP_003491210.1 | putative toxin-antitoxin system toxin component, PIN family | - |
| AMD17_RS00145 () | 23741..23980 | - | 240 | WP_003491212.1 | ribbon-helix-helix domain-containing protein | - |
| AMD17_RS00150 () | 24194..25117 | + | 924 | WP_003491216.1 | Tn3 family transposase TnpR_ISXc4 | Transposase |
| AMD17_RS00155 () | 25236..28505 | - | 3270 | WP_045716007.1 | TAL effector repeat-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|