MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 64919 bp
Accession: NZ_CP009015 Location: 1..64919 Organism: Xanthomonas citri pv. citri strain GD3 Replicon: plasmid pXAC64
Accession: NZ_CP009015 Location: 1..64919 Organism: Xanthomonas citri pv. citri strain GD3 Replicon: plasmid pXAC64
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AMD22_RS24465 () | 147..353 | - | 207 | WP_011052961.1 | hypothetical protein | - |
| AMD22_RS00180 () | 403..732 | - | 330 | WP_005918642.1 | hypothetical protein | - |
| AMD22_RS00185 () | 879..1478 | + | 600 | WP_015462601.1 | hypothetical protein | - |
| AMD22_RS00190 () | 1805..2254 | + | 450 | WP_015462602.1 | hypothetical protein | - |
| AMD22_RS00195 () | 2251..2856 | + | 606 | WP_011052963.1 | M48 family metalloprotease | - |
| AMD22_RS00200 () | 2853..3395 | + | 543 | WP_011052965.1 | hypothetical protein | - |
| AMD22_RS22425 () | 3475..3819 | - | 345 | WP_075150220.1 | hypothetical protein | - |
| AMD22_RS00205 () | 3862..5138 | - | 1277 | Protein_8 | lytic murein transglycosylase | - |
| AMD22_RS00210 () | 5271..8261 | - | 2991 | WP_045716274.1 | Tn3 family transposase TnpA_TnXax1 | Transposase |
| AMD22_RS00215 () | 8269..9543 | - | 1275 | WP_011052968.1 | Tn3 family transposase tnpS_TnXax1 | Transposase |
| AMD22_RS00220 () | 9735..10790 | + | 1056 | WP_011052969.1 | Tn3 family transposase tnpT_TnXax1 | Transposase |
| AMD22_RS00225 () | 10923..11999 | + | 1077 | WP_040107542.1 | hypothetical protein | - |
| AMD22_RS00240 () | 14557..17847 | + | 3291 | WP_045714813.1 | TAL effector repeat-containing protein | - |
| AMD22_RS00245 () | 18213..19433 | - | 1221 | WP_011052942.1 | replication initiation protein | - |
| AMD22_RS00250 () | 19681..19995 | - | 315 | WP_005918227.1 | hypothetical protein | - |
| AMD22_RS00255 () | 20140..20463 | - | 324 | WP_005918229.1 | hypothetical protein | - |
| AMD22_RS00260 () | 20460..21086 | - | 627 | WP_005931726.1 | Chromosome-partitioning ATPase Soj | VF |
| AMD22_RS00265 () | 21542..21850 | + | 309 | WP_015462607.1 | hypothetical protein | - |
| AMD22_RS22445 () | 21847..22056 | + | 210 | WP_015462608.1 | helix-turn-helix domain-containing protein | - |
| AMD22_RS00270 () | 22451..22804 | - | 354 | WP_039700904.1 | hypothetical protein | - |
| AMD22_RS00275 () | 22853..23562 | - | 710 | Protein_22 | plasmid stabilization protein | - |
| AMD22_RS00280 () | 23559..24005 | - | 447 | WP_011052937.1 | hypothetical protein | - |
| AMD22_RS00285 () | 24353..24748 | + | 396 | WP_011052973.1 | hypothetical protein | - |
| AMD22_RS24930 () | 24748..24921 | + | 174 | WP_011052974.1 | hypothetical protein | - |
| AMD22_RS22450 () | 25063..25335 | - | 273 | WP_005934628.1 | hypothetical protein | - |
| AMD22_RS00290 () | 25626..25976 | + | 351 | WP_015462612.1 | hypothetical protein | - |
| AMD22_RS22460 () | 26175..26516 | + | 342 | WP_031425612.1 | hypothetical protein | - |
| AMD22_RS00300 () | 26775..28349 | + | 1575 | WP_011052977.1 | type IV secretion system DNA-binding domain-containing protein | - |
| AMD22_RS00305 () | 28363..31338 | + | 2976 | WP_011052978.1 | Multifunctional conjugation protein TraI | Relaxase |
| AMD22_RS00310 () | 31392..31718 | - | 327 | WP_015462614.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| AMD22_RS00315 () | 31715..31933 | - | 219 | WP_003491150.1 | antitoxin MazE family protein | Antitoxin Detail |
| AMD22_RS00320 () | 32070..32456 | - | 387 | WP_003491149.1 | hypothetical protein | - |
| AMD22_RS00325 () | 32533..32952 | - | 420 | WP_011052981.1 | hypothetical protein | - |
| AMD22_RS00330 () | 33078..33956 | - | 879 | WP_011052982.1 | Type IV secretion system protein virB1 | VF |
| AMD22_RS00335 () | 33967..34989 | - | 1023 | WP_011052983.1 | Type IV secretion system protein VirB11 | VF |
| AMD22_RS00340 () | 35000..36220 | - | 1221 | WP_011052984.1 | Type IV secretion system protein virB10 | VF |
| AMD22_RS00345 () | 36222..37004 | - | 783 | WP_011052985.1 | Type IV secretion system protein virB9 | VF |
| AMD22_RS00350 () | 37029..37703 | - | 675 | WP_011052986.1 | type IV secretion system protein | - |
| AMD22_RS00355 () | 37700..38566 | - | 867 | WP_011052987.1 | type IV secretion system protein | - |
| AMD22_RS00360 () | 38568..38948 | - | 381 | WP_015462616.1 | hypothetical protein | - |
| AMD22_RS00365 () | 38941..39153 | - | 213 | WP_015462617.1 | hypothetical protein | - |
| AMD22_RS00370 () | 39201..39869 | - | 669 | WP_015462618.1 | VirB5 protein | - |
| AMD22_RS00375 () | 39866..42499 | - | 2634 | WP_011052991.1 | Type IV secretion system protein virB4 | VF |
| AMD22_RS00380 () | 42522..42821 | - | 300 | WP_003490875.1 | VirB3 family type IV secretion system protein | - |
| AMD22_RS00385 () | 42818..43195 | - | 378 | WP_011052992.1 | TrbC/VirB2 family protein | - |
| AMD22_RS00390 () | 43216..43506 | - | 291 | WP_003490957.1 | hypothetical protein | - |
| AMD22_RS24475 () | 43819..44034 | + | 216 | WP_155400515.1 | hypothetical protein | - |
| AMD22_RS00400 () | 44199..45285 | - | 1087 | Protein_49 | IS3 family transposase ISXac2 | Transposase |
| AMD22_RS00410 () | 45400..45636 | - | 237 | WP_015462622.1 | Wgr family protein | - |
| AMD22_RS00415 () | 45640..45969 | - | 330 | WP_011052996.1 | partition gene repressor | - |
| AMD22_RS00420 () | 46021..47052 | - | 1032 | WP_011052997.1 | ParB/RepB/Spo0J family partition protein | - |
| AMD22_RS00425 () | 47066..47833 | - | 768 | WP_011052998.1 | ParA family protein | - |
| AMD22_RS00430 () | 48638..49864 | - | 1227 | WP_015472949.1 | plasmid replication initiator protein | - |
| AMD22_RS00435 () | 50144..51331 | - | 1188 | WP_011053001.1 | zeta toxin family protein | - |
| AMD22_RS00440 () | 51338..51601 | - | 264 | WP_005917846.1 | hypothetical protein | - |
| AMD22_RS00445 () | 51626..52027 | - | 402 | WP_011053002.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| AMD22_RS00450 () | 52024..52284 | - | 261 | WP_011053003.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| AMD22_RS00455 () | 52475..53047 | + | 573 | WP_011053004.1 | Tn3 family transposase ISPsy42 | Transposase |
| AMD22_RS00460 () | 53078..53666 | - | 589 | Protein_60 | IS3 family transposase ISXac3 | Transposase |
| AMD22_RS00465 () | 55220..58711 | + | 3492 | WP_011053008.1 | TAL effector repeat-containing protein | - |
| AMD22_RS22490 () | 58810..58956 | - | 147 | Protein_62 | transposase | - |
| AMD22_RS22495 () | 59001..59495 | - | 495 | Protein_63 | UPF0149 family protein | - |
| AMD22_RS00470 () | 59497..62439 | - | 2943 | Protein_64 | Tn3 family transposase TnpA_ISXc4 | Transposase |
| AMD22_RS00475 () | 62444..62863 | - | 420 | WP_003491210.1 | putative toxin-antitoxin system toxin component, PIN family | - |
| AMD22_RS00480 () | 62863..63102 | - | 240 | WP_003491212.1 | ribbon-helix-helix domain-containing protein | - |
| AMD22_RS00485 () | 63316..64239 | + | 924 | WP_003491216.1 | Tn3 family transposase TnpR_ISXc4 | Transposase |
| AMD22_RS00490 () | 64283..64465 | + | 183 | Protein_68 | helix-turn-helix domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|