MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 64912 bp
Accession: NZ_CP009009 Location: 1..64912 Organism: Xanthomonas citri pv. citri strain JX5 Replicon: plasmid pXAC64
Accession: NZ_CP009009 Location: 1..64912 Organism: Xanthomonas citri pv. citri strain JX5 Replicon: plasmid pXAC64
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AMD20_RS24480 () | 147..353 | - | 207 | WP_011052961.1 | hypothetical protein | - |
| AMD20_RS00180 () | 403..732 | - | 330 | WP_005918642.1 | hypothetical protein | - |
| AMD20_RS00185 () | 879..1478 | + | 600 | WP_015462601.1 | hypothetical protein | - |
| AMD20_RS00190 () | 1805..2254 | + | 450 | WP_045714519.1 | hypothetical protein | - |
| AMD20_RS00195 () | 2251..2856 | + | 606 | WP_011052963.1 | M48 family metalloprotease | - |
| AMD20_RS00200 () | 2853..3395 | + | 543 | WP_011052965.1 | hypothetical protein | - |
| AMD20_RS22435 () | 3475..3819 | - | 345 | WP_075150220.1 | hypothetical protein | - |
| AMD20_RS00205 () | 3862..5139 | - | 1278 | WP_011052966.1 | lytic murein transglycosylase | - |
| AMD20_RS00210 () | 5272..8262 | - | 2991 | WP_045715645.1 | Tn3-like element TnXax1 family transposase | - |
| AMD20_RS00215 () | 8270..9544 | - | 1275 | WP_011052968.1 | tyrosine-type recombinase/integrase | - |
| AMD20_RS00220 () | 9736..10791 | + | 1056 | WP_011052969.1 | DNA-binding protein | - |
| AMD20_RS00225 () | 10924..12000 | + | 1077 | WP_040107542.1 | hypothetical protein | - |
| AMD20_RS00240 () | 14558..17848 | + | 3291 | WP_011052972.1 | TAL effector repeat-containing protein | - |
| AMD20_RS00245 () | 18214..19398 | - | 1185 | Protein_15 | replication initiation protein | - |
| AMD20_RS00250 () | 19674..19988 | - | 315 | WP_005918227.1 | hypothetical protein | - |
| AMD20_RS00255 () | 20133..20456 | - | 324 | WP_005918229.1 | hypothetical protein | - |
| AMD20_RS00260 () | 20453..21079 | - | 627 | WP_005931726.1 | ParA family protein | - |
| AMD20_RS00265 () | 21535..21843 | + | 309 | WP_015462607.1 | hypothetical protein | - |
| AMD20_RS22455 () | 21840..22049 | + | 210 | WP_015462608.1 | helix-turn-helix domain-containing protein | - |
| AMD20_RS00270 () | 22444..22797 | - | 354 | WP_039700904.1 | hypothetical protein | - |
| AMD20_RS00275 () | 22846..23555 | - | 710 | Protein_22 | plasmid stabilization protein | - |
| AMD20_RS00280 () | 23552..23998 | - | 447 | WP_011052937.1 | hypothetical protein | - |
| AMD20_RS00285 () | 24346..24741 | + | 396 | WP_011052973.1 | hypothetical protein | - |
| AMD20_RS24960 () | 24741..24914 | + | 174 | WP_011052974.1 | hypothetical protein | - |
| AMD20_RS22460 () | 25056..25328 | - | 273 | WP_005934628.1 | hypothetical protein | - |
| AMD20_RS00290 () | 25619..25969 | + | 351 | WP_015462612.1 | hypothetical protein | - |
| AMD20_RS22470 () | 26168..26509 | + | 342 | WP_031425612.1 | hypothetical protein | - |
| AMD20_RS00300 () | 26768..28342 | + | 1575 | WP_011052977.1 | type IV secretion system DNA-binding domain-containing protein | - |
| AMD20_RS00305 () | 28356..31331 | + | 2976 | WP_045715643.1 | conjugative relaxase | - |
| AMD20_RS00310 () | 31385..31711 | - | 327 | WP_015462614.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| AMD20_RS00315 () | 31708..31926 | - | 219 | WP_003491150.1 | antitoxin MazE family protein | Antitoxin Detail |
| AMD20_RS00320 () | 32063..32449 | - | 387 | WP_003491149.1 | hypothetical protein | - |
| AMD20_RS00325 () | 32526..32945 | - | 420 | WP_011052981.1 | hypothetical protein | - |
| AMD20_RS00330 () | 33071..33949 | - | 879 | WP_011052982.1 | transglycosylase SLT domain-containing protein | - |
| AMD20_RS00335 () | 33960..34982 | - | 1023 | WP_011052983.1 | P-type DNA transfer ATPase VirB11 | - |
| AMD20_RS00340 () | 34993..36213 | - | 1221 | WP_011052984.1 | TrbI/VirB10 family protein | - |
| AMD20_RS00345 () | 36215..36997 | - | 783 | WP_011052985.1 | P-type conjugative transfer protein VirB9 | - |
| AMD20_RS00350 () | 37022..37696 | - | 675 | WP_011052986.1 | type IV secretion system protein | - |
| AMD20_RS00355 () | 37693..38559 | - | 867 | WP_011052987.1 | type IV secretion system protein | - |
| AMD20_RS00360 () | 38561..38941 | - | 381 | WP_015462616.1 | hypothetical protein | - |
| AMD20_RS00365 () | 38934..39146 | - | 213 | WP_015462617.1 | hypothetical protein | - |
| AMD20_RS00370 () | 39194..39862 | - | 669 | WP_015462618.1 | VirB5 protein | - |
| AMD20_RS00375 () | 39859..42492 | - | 2634 | WP_045715644.1 | type VI secretion protein | - |
| AMD20_RS00380 () | 42515..42814 | - | 300 | WP_003490875.1 | VirB3 family type IV secretion system protein | - |
| AMD20_RS00385 () | 42811..43188 | - | 378 | WP_011052992.1 | TrbC/VirB2 family protein | - |
| AMD20_RS00390 () | 43209..43499 | - | 291 | WP_003490957.1 | hypothetical protein | - |
| AMD20_RS24490 () | 43812..44027 | + | 216 | WP_155400515.1 | hypothetical protein | - |
| AMD20_RS00400 () | 44192..45278 | - | 1087 | Protein_49 | IS3 family transposase | - |
| AMD20_RS00410 () | 45393..45629 | - | 237 | WP_015462622.1 | Wgr family protein | - |
| AMD20_RS00415 () | 45633..45962 | - | 330 | WP_011052996.1 | partition gene repressor | - |
| AMD20_RS00420 () | 46014..47045 | - | 1032 | WP_011052997.1 | ParB/RepB/Spo0J family partition protein | - |
| AMD20_RS00425 () | 47059..47826 | - | 768 | WP_011052998.1 | ParA family protein | - |
| AMD20_RS00430 () | 48631..49857 | - | 1227 | WP_015472949.1 | plasmid replication initiator protein | - |
| AMD20_RS00435 () | 50137..51324 | - | 1188 | WP_011053001.1 | zeta toxin family protein | - |
| AMD20_RS00440 () | 51331..51594 | - | 264 | WP_005917846.1 | hypothetical protein | - |
| AMD20_RS00445 () | 51619..52020 | - | 402 | WP_011053002.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| AMD20_RS00450 () | 52017..52277 | - | 261 | WP_011053003.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| AMD20_RS00455 () | 52468..53040 | + | 573 | WP_011053004.1 | recombinase family protein | - |
| AMD20_RS00460 () | 53071..53659 | - | 589 | Protein_60 | IS3 family transposase | - |
| AMD20_RS00465 () | 55213..58704 | + | 3492 | WP_011053008.1 | TAL effector repeat-containing protein | - |
| AMD20_RS22500 () | 58803..58949 | - | 147 | Protein_62 | transposase | - |
| AMD20_RS22505 () | 58994..59488 | - | 495 | Protein_63 | UPF0149 family protein | - |
| AMD20_RS00470 () | 59490..62432 | - | 2943 | Protein_64 | Tn3-like element ISXc4 family transposase | - |
| AMD20_RS00475 () | 62437..62856 | - | 420 | WP_003491210.1 | putative toxin-antitoxin system toxin component, PIN family | - |
| AMD20_RS00480 () | 62856..63095 | - | 240 | WP_003491212.1 | ribbon-helix-helix domain-containing protein | - |
| AMD20_RS00485 () | 63309..64232 | + | 924 | WP_003491216.1 | recombinase family protein | - |
| AMD20_RS00490 () | 64276..64458 | + | 183 | Protein_68 | helix-turn-helix domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|