MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 63721 bp
Accession: NZ_CP009000 Location: 1..63721 Organism: Xanthomonas citri pv. citri strain MN11 Replicon: plasmid pXAC64
Accession: NZ_CP009000 Location: 1..63721 Organism: Xanthomonas citri pv. citri strain MN11 Replicon: plasmid pXAC64
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AMD15_RS24445 () | 147..353 | - | 207 | WP_011052961.1 | hypothetical protein | - |
| AMD15_RS00180 () | 403..732 | - | 330 | WP_005918642.1 | hypothetical protein | - |
| AMD15_RS00185 () | 879..1478 | + | 600 | WP_015462601.1 | hypothetical protein | - |
| AMD15_RS00190 () | 1805..2254 | + | 450 | WP_045714519.1 | hypothetical protein | - |
| AMD15_RS00195 () | 2251..2856 | + | 606 | WP_011052963.1 | M48 family metalloprotease | - |
| AMD15_RS00200 () | 2853..3395 | + | 543 | WP_011052965.1 | hypothetical protein | - |
| AMD15_RS22400 () | 3475..3819 | - | 345 | WP_075150220.1 | hypothetical protein | - |
| AMD15_RS00205 () | 3862..5139 | - | 1278 | WP_011052966.1 | lytic murein transglycosylase | - |
| AMD15_RS00210 () | 5272..8262 | - | 2991 | WP_011052967.1 | Tn3 family transposase TnpA_TnXax1 | Transposase |
| AMD15_RS00215 () | 8270..9544 | - | 1275 | WP_011052968.1 | Tn3 family transposase tnpS_TnXax1 | Transposase |
| AMD15_RS00220 () | 9736..10791 | + | 1056 | WP_011052969.1 | Tn3 family transposase tnpT_TnXax1 | Transposase |
| AMD15_RS00225 () | 10924..12000 | + | 1077 | WP_040107542.1 | hypothetical protein | - |
| AMD15_RS00230 () | 13359..16649 | + | 3291 | WP_011052972.1 | TAL effector repeat-containing protein | - |
| AMD15_RS00235 () | 17015..18235 | - | 1221 | WP_011052942.1 | replication initiation protein | - |
| AMD15_RS00240 () | 18483..18797 | - | 315 | WP_005918227.1 | hypothetical protein | - |
| AMD15_RS00245 () | 18942..19265 | - | 324 | WP_005918229.1 | hypothetical protein | - |
| AMD15_RS00250 () | 19262..19888 | - | 627 | WP_005931726.1 | Chromosome-partitioning ATPase Soj | VF |
| AMD15_RS00255 () | 20344..20652 | + | 309 | WP_015462607.1 | hypothetical protein | - |
| AMD15_RS22415 () | 20649..20858 | + | 210 | WP_015462608.1 | helix-turn-helix domain-containing protein | - |
| AMD15_RS00260 () | 21253..21606 | - | 354 | WP_039700904.1 | hypothetical protein | - |
| AMD15_RS00265 () | 21655..22364 | - | 710 | Protein_21 | plasmid stabilization protein | - |
| AMD15_RS00270 () | 22361..22807 | - | 447 | WP_011052937.1 | hypothetical protein | - |
| AMD15_RS00275 () | 23155..23550 | + | 396 | WP_011052973.1 | hypothetical protein | - |
| AMD15_RS24920 () | 23550..23723 | + | 174 | WP_011052974.1 | hypothetical protein | - |
| AMD15_RS22420 () | 23865..24137 | - | 273 | WP_005934628.1 | hypothetical protein | - |
| AMD15_RS00280 () | 24428..24778 | + | 351 | WP_015462612.1 | hypothetical protein | - |
| AMD15_RS22430 () | 24977..25318 | + | 342 | WP_031425612.1 | hypothetical protein | - |
| AMD15_RS00290 () | 25577..27151 | + | 1575 | WP_011052977.1 | type IV secretion system DNA-binding domain-containing protein | - |
| AMD15_RS00295 () | 27165..30140 | + | 2976 | WP_011052978.1 | Multifunctional conjugation protein TraI | Relaxase |
| AMD15_RS00300 () | 30194..30520 | - | 327 | WP_015462614.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| AMD15_RS00305 () | 30517..30735 | - | 219 | WP_003491150.1 | antitoxin MazE family protein | Antitoxin Detail |
| AMD15_RS00310 () | 30872..31258 | - | 387 | WP_003491149.1 | hypothetical protein | - |
| AMD15_RS00315 () | 31335..31754 | - | 420 | WP_011052981.1 | hypothetical protein | - |
| AMD15_RS00320 () | 31880..32758 | - | 879 | WP_011052982.1 | Type IV secretion system protein virB1 | VF |
| AMD15_RS00325 () | 32769..33791 | - | 1023 | WP_011052983.1 | Type IV secretion system protein VirB11 | VF |
| AMD15_RS00330 () | 33802..35022 | - | 1221 | WP_011052984.1 | Type IV secretion system protein virB10 | VF |
| AMD15_RS00335 () | 35024..35806 | - | 783 | WP_011052985.1 | Type IV secretion system protein virB9 | VF |
| AMD15_RS00340 () | 35831..36505 | - | 675 | WP_011052986.1 | type IV secretion system protein | - |
| AMD15_RS00345 () | 36502..37368 | - | 867 | WP_011052987.1 | type IV secretion system protein | - |
| AMD15_RS00350 () | 37370..37750 | - | 381 | WP_015462616.1 | hypothetical protein | - |
| AMD15_RS00355 () | 37743..37955 | - | 213 | WP_015462617.1 | hypothetical protein | - |
| AMD15_RS00360 () | 38003..38671 | - | 669 | WP_015462618.1 | VirB5 protein | - |
| AMD15_RS00365 () | 38668..41301 | - | 2634 | WP_011052991.1 | Type IV secretion system protein virB4 | VF |
| AMD15_RS00370 () | 41324..41623 | - | 300 | WP_003490875.1 | VirB3 family type IV secretion system protein | - |
| AMD15_RS00375 () | 41620..41997 | - | 378 | WP_011052992.1 | TrbC/VirB2 family protein | - |
| AMD15_RS00380 () | 42018..42308 | - | 291 | WP_003490957.1 | hypothetical protein | - |
| AMD15_RS24455 () | 42603..42836 | + | 234 | WP_040107540.1 | hypothetical protein | - |
| AMD15_RS00390 () | 43001..44087 | - | 1087 | Protein_48 | IS3 family transposase ISXac2 | Transposase |
| AMD15_RS00400 () | 44202..44438 | - | 237 | WP_015462622.1 | Wgr family protein | - |
| AMD15_RS00405 () | 44442..44771 | - | 330 | WP_011052996.1 | partition gene repressor | - |
| AMD15_RS00410 () | 44823..45854 | - | 1032 | WP_011052997.1 | ParB/RepB/Spo0J family partition protein | - |
| AMD15_RS00415 () | 45868..46635 | - | 768 | WP_011052998.1 | ParA family protein | - |
| AMD15_RS00420 () | 47440..48666 | - | 1227 | WP_015472949.1 | plasmid replication initiator protein | - |
| AMD15_RS00425 () | 48946..50133 | - | 1188 | WP_011053001.1 | zeta toxin family protein | - |
| AMD15_RS00430 () | 50140..50403 | - | 264 | WP_005917846.1 | hypothetical protein | - |
| AMD15_RS00435 () | 50428..50829 | - | 402 | WP_011053002.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| AMD15_RS00440 () | 50826..51086 | - | 261 | WP_011053003.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| AMD15_RS00445 () | 51277..51849 | + | 573 | WP_011053004.1 | Tn3 family transposase ISPsy42 | Transposase |
| AMD15_RS00450 () | 51880..52468 | - | 589 | Protein_59 | IS3 family transposase ISXac3 | Transposase |
| AMD15_RS00455 () | 54022..57513 | + | 3492 | WP_011053008.1 | TAL effector repeat-containing protein | - |
| AMD15_RS22460 () | 57612..57758 | - | 147 | Protein_61 | transposase | - |
| AMD15_RS22465 () | 57803..58297 | - | 495 | Protein_62 | UPF0149 family protein | - |
| AMD15_RS00460 () | 58299..61241 | - | 2943 | Protein_63 | Tn3 family transposase TnpA_ISXc4 | Transposase |
| AMD15_RS00465 () | 61246..61665 | - | 420 | WP_003491210.1 | putative toxin-antitoxin system toxin component, PIN family | - |
| AMD15_RS00470 () | 61665..61904 | - | 240 | WP_003491212.1 | ribbon-helix-helix domain-containing protein | - |
| AMD15_RS00475 () | 62118..63041 | + | 924 | WP_003491216.1 | Tn3 family transposase TnpR_ISXc4 | Transposase |
| AMD15_RS00480 () | 63085..63267 | + | 183 | Protein_67 | helix-turn-helix domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|