MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 28776 bp
Accession: NZ_CP008993 Location: 1..28776 Organism: Xanthomonas citri pv. citri strain NT17 Replicon: plasmid pXAC33
Accession: NZ_CP008993 Location: 1..28776 Organism: Xanthomonas citri pv. citri strain NT17 Replicon: plasmid pXAC33
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AMD13_RS00010 () | 70..1157 | + | 1088 | WP_087943923.1 | IS3 family transposase ISXac2 | Transposase |
| AMD13_RS22515 () | 1123..1752 | - | 630 | WP_011052932.1 | Tn3 family transposase ISPsy42 | Transposase |
| AMD13_RS00020 () | 1932..2183 | + | 252 | WP_003108276.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | - |
| AMD13_RS00025 () | 2180..2575 | + | 396 | WP_015463818.1 | type II toxin-antitoxin system VapC family toxin | - |
| AMD13_RS00030 () | 2736..3113 | - | 378 | WP_004666662.1 | hypothetical protein | - |
| AMD13_RS22520 () | 3172..3417 | - | 246 | Protein_5 | IS3 family transposase ISStma14 | Transposase |
| AMD13_RS22525 () | 3530..3802 | + | 273 | WP_005934628.1 | hypothetical protein | - |
| AMD13_RS25150 () | 3944..4117 | - | 174 | WP_011052974.1 | hypothetical protein | - |
| AMD13_RS00035 () | 4117..4512 | - | 396 | WP_011052973.1 | hypothetical protein | - |
| AMD13_RS00040 () | 4860..5306 | + | 447 | WP_011052937.1 | hypothetical protein | - |
| AMD13_RS00045 () | 5303..6012 | + | 710 | Protein_10 | plasmid stabilization protein | - |
| AMD13_RS00050 () | 6061..6414 | + | 354 | WP_039700904.1 | hypothetical protein | - |
| AMD13_RS22530 () | 6809..7018 | - | 210 | WP_015462608.1 | helix-turn-helix domain-containing protein | - |
| AMD13_RS00055 () | 7015..7323 | - | 309 | WP_015462607.1 | hypothetical protein | - |
| AMD13_RS00060 () | 7779..8405 | + | 627 | WP_005931726.1 | Chromosome-partitioning ATPase Soj | VF |
| AMD13_RS00065 () | 8402..8725 | + | 324 | WP_005918229.1 | hypothetical protein | - |
| AMD13_RS00070 () | 8870..9184 | + | 315 | WP_005918227.1 | hypothetical protein | - |
| AMD13_RS00075 () | 9432..10652 | + | 1221 | WP_011052942.1 | replication initiation protein | - |
| AMD13_RS00080 () | 11018..14398 | - | 3381 | WP_011052943.1 | TAL effector repeat-containing protein | - |
| AMD13_RS24630 () | 14644..14865 | - | 222 | WP_011052944.1 | hypothetical protein | - |
| AMD13_RS00095 () | 15155..15691 | - | 537 | WP_015463823.1 | plasmid pRiA4b ORF-3 family protein | - |
| AMD13_RS00100 () | 15681..15893 | - | 213 | WP_011052947.1 | hypothetical protein | - |
| AMD13_RS24635 () | 15890..16141 | - | 252 | WP_125459571.1 | hypothetical protein | - |
| AMD13_RS00105 () | 16164..16496 | - | 333 | WP_015463824.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| AMD13_RS00110 () | 16496..16753 | - | 258 | WP_011052949.1 | antitoxin | Antitoxin Detail |
| AMD13_RS00115 () | 16959..17561 | + | 603 | WP_011052950.1 | Tn3 family transposase TnpR_ISPsy30 | Transposase |
| AMD13_RS22545 () | 17545..17849 | + | 305 | Protein_26 | Tn3 family transposase TnpA_ISPsy30 | Transposase |
| AMD13_RS00120 () | 18016..18222 | - | 207 | Protein_27 | Tn3 family transposase TnpA_TnXo19 | Transposase |
| AMD13_RS22550 () | 18267..18836 | - | 570 | Protein_28 | UPF0149 family protein | - |
| AMD13_RS00125 () | 18855..20069 | - | 1215 | WP_011050083.1 | IS4 family transposase ISXac1 | Transposase |
| AMD13_RS24640 () | 20143..20325 | - | 183 | Protein_30 | UPF0149 family protein | - |
| AMD13_RS00130 () | 20344..23319 | - | 2976 | Protein_31 | Tn3 family transposase TnpA_ISXc4 | Transposase |
| AMD13_RS00140 () | 23324..23743 | - | 420 | WP_003491210.1 | putative toxin-antitoxin system toxin component, PIN family | - |
| AMD13_RS00145 () | 23743..23982 | - | 240 | WP_003491212.1 | ribbon-helix-helix domain-containing protein | - |
| AMD13_RS00150 () | 24196..25119 | + | 924 | WP_003491216.1 | Tn3 family transposase TnpR_ISXc4 | Transposase |
| AMD13_RS00155 () | 25238..28528 | - | 3291 | WP_045715407.1 | TAL effector repeat-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|