MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 87840 bp
Accession: NZ_CP008873 Location: 2635482..2723321 Organism: Pseudomonas aeruginosa strain F9670 Replicon: chromosome
Accession: NZ_CP008873 Location: 2635482..2723321 Organism: Pseudomonas aeruginosa strain F9670 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HW11_RS12010 () | 2630637..2631599 | + | 963 | WP_003094686.1 | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | - |
| HW11_RS12015 () | 2631596..2632324 | + | 729 | WP_003102588.1 | peptidoglycan editing factor PgeF | - |
| HW11_RS12020 () | 2632480..2635044 | + | 2565 | WP_003145976.1 | ATP-dependent chaperone ClpB | - |
| HW11_RS12040 () | 2635897..2637177 | - | 1281 | WP_023101469.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| HW11_RS12045 () | 2637174..2639092 | - | 1919 | Protein_2385 | TraI domain-containing protein | - |
| HW11_RS32520 () | 2639111..2639365 | - | 255 | WP_123906486.1 | hypothetical protein | - |
| HW11_RS12055 () | 2639478..2640640 | + | 1163 | WP_088477278.1 | IS3 family transposase IS222 | Transposase |
| HW11_RS31615 () | 2640776..2641015 | + | 240 | WP_010792230.1 | hypothetical protein | - |
| HW11_RS12060 () | 2641041..2641955 | + | 915 | WP_003119431.1 | hypothetical protein | - |
| HW11_RS12065 () | 2641982..2642335 | - | 354 | WP_003111729.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| HW11_RS12070 () | 2642339..2642611 | - | 273 | WP_003111730.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| HW11_RS32525 () | 2642727..2643080 | + | 354 | WP_134249957.1 | hypothetical protein | - |
| HW11_RS12075 () | 2643118..2644629 | - | 1512 | WP_019484419.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| HW11_RS12080 () | 2644626..2644973 | - | 348 | WP_012076881.1 | hypothetical protein | - |
| HW11_RS12085 () | 2644973..2646355 | - | 1383 | WP_023101466.1 | integrating conjugative element protein | - |
| HW11_RS12090 () | 2646373..2647311 | - | 939 | WP_019484421.1 | TIGR03756 family integrating conjugative element protein | - |
| HW11_RS12095 () | 2647311..2647742 | - | 432 | WP_019484422.1 | TIGR03757 family integrating conjugative element protein | - |
| HW11_RS12110 () | 2649883..2650101 | + | 219 | WP_019484423.1 | hypothetical protein | - |
| HW11_RS12115 () | 2650098..2650757 | - | 660 | WP_019484424.1 | DsbA family protein | - |
| HW11_RS12120 () | 2650754..2651038 | - | 285 | WP_003086159.1 | hypothetical protein | - |
| HW11_RS12125 () | 2651035..2653976 | - | 2942 | Protein_2401 | conjugative transfer ATPase | - |
| HW11_RS12130 () | 2653976..2654419 | - | 444 | WP_023083781.1 | TIGR03751 family conjugal transfer lipoprotein | - |
| HW11_RS12135 () | 2654397..2655902 | - | 1506 | WP_019484427.1 | TIGR03752 family integrating conjugative element protein | - |
| HW11_RS12140 () | 2655886..2656769 | - | 884 | Protein_2404 | TIGR03749 family integrating conjugative element protein | - |
| HW11_RS31620 () | 2656789..2657424 | - | 636 | Protein_2405 | TIGR03746 family integrating conjugative element protein | - |
| HW11_RS12145 () | 2657421..2657807 | - | 387 | WP_003117078.1 | TIGR03750 family conjugal transfer protein | - |
| HW11_RS32530 () | 2657818..2658173 | - | 356 | Protein_2407 | TIGR03745 family integrating conjugative element membrane protein | - |
| HW11_RS12155 () | 2658191..2658430 | - | 240 | WP_003121019.1 | TIGR03758 family integrating conjugative element protein | - |
| HW11_RS12160 () | 2658427..2658765 | - | 339 | WP_003158157.1 | RAQPRD family integrative conjugative element protein | - |
| HW11_RS12165 () | 2658859..2659158 | - | 300 | WP_003117075.1 | hypothetical protein | - |
| HW11_RS31630 () | 2659331..2659641 | + | 311 | Protein_2411 | DUF2845 domain-containing protein | - |
| HW11_RS32835 () | 2659687..2660796 | - | 1110 | WP_003121016.1 | hypothetical protein | - |
| HW11_RS12175 () | 2660928..2662409 | - | 1482 | WP_003117073.1 | UvrD-helicase domain-containing protein | - |
| HW11_RS12180 () | 2662651..2663142 | - | 492 | WP_003099826.1 | hypothetical protein | - |
| HW11_RS12185 () | 2663160..2663906 | - | 747 | WP_003099824.1 | TIGR03747 family integrating conjugative element membrane protein | - |
| HW11_RS12190 () | 2663906..2666137 | - | 2232 | WP_003099821.1 | type IV conjugative transfer system coupling protein TraD | - |
| HW11_RS12195 () | 2666141..2666347 | - | 207 | WP_073689213.1 | hypothetical protein | - |
| HW11_RS12200 () | 2666419..2666919 | - | 501 | WP_003099819.1 | integrating conjugative element protein | - |
| HW11_RS12205 () | 2666916..2667497 | - | 582 | WP_003117072.1 | hypothetical protein | VF |
| HW11_RS12210 () | 2667482..2668237 | - | 756 | WP_003099814.1 | TIGR03759 family integrating conjugative element protein | - |
| HW11_RS12215 () | 2668248..2668946 | - | 699 | WP_023094353.1 | hypothetical protein | - |
| HW11_RS12220 () | 2669164..2669436 | + | 273 | WP_003125312.1 | hypothetical protein | - |
| HW11_RS31635 () | 2670263..2670586 | - | 324 | WP_003158159.1 | hypothetical protein | - |
| HW11_RS12225 () | 2670605..2670997 | - | 393 | WP_003158160.1 | hypothetical protein | - |
| HW11_RS12230 () | 2671549..2672145 | - | 597 | WP_003158161.1 | VWA domain-containing protein | - |
| HW11_RS32840 () | 2672130..2672714 | - | 585 | WP_044265603.1 | hypothetical protein | - |
| HW11_RS12240 () | 2672739..2673113 | - | 375 | WP_003158163.1 | hypothetical protein | - |
| HW11_RS12245 () | 2673977..2674660 | - | 684 | WP_003158165.1 | SOS response-associated peptidase family protein | - |
| HW11_RS12250 () | 2674765..2675195 | + | 431 | Protein_2429 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| HW11_RS32535 () | 2675221..2675382 | - | 162 | Protein_2430 | helicase | - |
| HW11_RS12260 () | 2675488..2676933 | - | 1446 | WP_003158168.1 | class I SAM-dependent methyltransferase | - |
| HW11_RS12265 () | 2676963..2677568 | - | 606 | WP_003158169.1 | hypothetical protein | - |
| HW11_RS12270 () | 2677661..2677915 | - | 255 | WP_003117062.1 | hypothetical protein | - |
| HW11_RS12275 () | 2677983..2678345 | - | 363 | WP_003117061.1 | hypothetical protein | - |
| HW11_RS12280 () | 2678415..2678690 | - | 276 | WP_003117060.1 | hypothetical protein | - |
| HW11_RS12285 () | 2678687..2679319 | - | 633 | WP_003158170.1 | DUF3275 family protein | - |
| HW11_RS12290 () | 2679376..2679726 | - | 351 | WP_003099791.1 | hypothetical protein | - |
| HW11_RS12295 () | 2679962..2680669 | - | 708 | WP_003117058.1 | hypothetical protein | - |
| HW11_RS12300 () | 2681154..2681351 | - | 198 | WP_003117057.1 | hypothetical protein | - |
| HW11_RS32845 () | 2681425..2681583 | - | 159 | WP_003109368.1 | hypothetical protein | - |
| HW11_RS12305 () | 2681721..2682200 | - | 480 | WP_003117056.1 | DUF3577 domain-containing protein | - |
| HW11_RS32850 () | 2682661..2682834 | - | 174 | WP_003158172.1 | hypothetical protein | - |
| HW11_RS32855 () | 2682909..2683154 | - | 246 | WP_003117055.1 | hypothetical protein | - |
| HW11_RS12315 () | 2684217..2684654 | - | 438 | WP_003117054.1 | hypothetical protein | VF |
| HW11_RS12320 () | 2684672..2686051 | - | 1380 | WP_003117053.1 | hypothetical protein | VF |
| HW11_RS12325 () | 2686044..2687000 | - | 957 | WP_003117051.1 | Twitching mobility protein | VF |
| HW11_RS12330 () | 2686997..2687527 | - | 531 | WP_003099765.1 | hypothetical protein | VF |
| HW11_RS12335 () | 2687549..2688607 | - | 1059 | WP_034036354.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| HW11_RS12340 () | 2688627..2690207 | - | 1581 | WP_003099761.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| HW11_RS12345 () | 2690216..2690749 | - | 534 | WP_003099760.1 | type IV pilus biogenesis protein PilP | - |
| HW11_RS12350 () | 2690739..2692064 | - | 1326 | WP_003099758.1 | type 4b pilus protein PilO2 | - |
| HW11_RS12355 () | 2692068..2693777 | - | 1710 | WP_012076860.1 | Outer membrane lipoprotein BfpB | VF |
| HW11_RS12360 () | 2693777..2694901 | - | 1125 | WP_012076859.1 | hypothetical protein | VF |
| HW11_RS12365 () | 2695103..2695402 | + | 300 | WP_003120987.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| HW11_RS12370 () | 2695399..2695689 | + | 291 | WP_003448662.1 | putative addiction module antidote protein | Antitoxin Detail |
| HW11_RS12375 () | 2695760..2696104 | - | 345 | WP_016851612.1 | hypothetical protein | - |
| HW11_RS12380 () | 2696245..2698221 | - | 1977 | WP_016851611.1 | DEAD/DEAH box helicase | - |
| HW11_RS12385 () | 2698218..2700106 | - | 1889 | Protein_2458 | hypothetical protein | - |
| HW11_RS12390 () | 2700328..2700537 | - | 210 | WP_003105733.1 | cold-shock protein | - |
| HW11_RS12395 () | 2700844..2702763 | - | 1920 | WP_023101571.1 | type I DNA topoisomerase | - |
| HW11_RS31665 () | 2702879..2703046 | - | 168 | WP_170323396.1 | CrpP family protein | - |
| HW11_RS12400 () | 2703291..2703485 | - | 195 | WP_016851608.1 | hypothetical protein | - |
| HW11_RS12405 () | 2703591..2704049 | - | 459 | WP_016851607.1 | single-stranded DNA-binding protein | - |
| HW11_RS12410 () | 2704079..2704909 | - | 831 | WP_012076855.1 | phage regulatory protein | - |
| HW11_RS12415 () | 2704957..2705505 | - | 549 | WP_016851606.1 | DUF3158 family protein | - |
| HW11_RS12420 () | 2705511..2706239 | - | 729 | WP_016851605.1 | TIGR03761 family integrating conjugative element protein | - |
| HW11_RS12425 () | 2706396..2706593 | - | 198 | WP_019485319.1 | hypothetical protein | - |
| HW11_RS31670 () | 2707847..2709172 | - | 1326 | WP_019484535.1 | hypothetical protein | - |
| HW11_RS12435 () | 2709169..2709936 | - | 768 | WP_004352844.1 | DUF2857 domain-containing protein | - |
| HW11_RS12440 () | 2709964..2711697 | - | 1734 | WP_019484534.1 | ParB family protein | - |
| HW11_RS12445 () | 2711694..2711963 | - | 270 | WP_003117035.1 | Arc family DNA-binding protein | - |
| HW11_RS12450 () | 2711984..2712874 | - | 891 | WP_003117034.1 | DNA adenine methylase | - |
| HW11_RS12455 () | 2712871..2713893 | - | 1023 | WP_023124916.1 | nucleoid-associated protein YejK | - |
| HW11_RS12460 () | 2713893..2714126 | - | 234 | WP_019486083.1 | hypothetical protein | - |
| HW11_RS32545 () | 2714119..2714616 | - | 498 | WP_123796553.1 | hypothetical protein | - |
| HW11_RS12470 () | 2714609..2714866 | - | 258 | WP_019486081.1 | hypothetical protein | - |
| HW11_RS12475 () | 2714863..2715390 | - | 528 | WP_003141385.1 | hypothetical protein | - |
| HW11_RS12480 () | 2715380..2715565 | - | 186 | WP_019486080.1 | hypothetical protein | - |
| HW11_RS32860 () | 2715743..2716189 | + | 447 | WP_003117028.1 | hypothetical protein | - |
| HW11_RS12490 () | 2716628..2717971 | - | 1344 | WP_019486079.1 | replicative DNA helicase | - |
| HW11_RS12495 () | 2717968..2718186 | - | 219 | WP_003122068.1 | hypothetical protein | - |
| HW11_RS12500 () | 2718170..2718877 | - | 708 | WP_003122069.1 | HNH endonuclease | - |
| HW11_RS12505 () | 2718874..2719575 | - | 702 | WP_004347982.1 | DUF2786 domain-containing protein | - |
| HW11_RS12510 () | 2719575..2720261 | - | 687 | WP_003122071.1 | hypothetical protein | - |
| HW11_RS12515 () | 2720258..2721079 | - | 822 | WP_019486078.1 | hypothetical protein | - |
| HW11_RS12520 () | 2721085..2721582 | - | 498 | WP_003111783.1 | hypothetical protein | - |
| HW11_RS12525 () | 2721579..2722316 | - | 738 | WP_019486077.1 | hypothetical protein | - |
| HW11_RS12530 () | 2722318..2723184 | - | 867 | WP_003111785.1 | ParA family protein | - |
| HW11_RS12535 () | 2723550..2727749 | - | 4200 | WP_016852119.1 | two-partner secretion system exoprotein TpsA4 | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|